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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03871 - RNA_pol_Rpb5_N)
RNA polymerase Rpb5, N-terminal domain
(Pfam reference: accession no. PF03871)
(Interpro reference: accession no. IPR005571)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 122 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.65)
nucleotides
(available for above)
11 sequences @ 366 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 4.64)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 122 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 6.65)