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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03870 alignment
(6 sequences with 152 aa)


Q40944_CHLS6/11-145 NDIIKILSKDPDGKLYEKVSRIIAQSYYLN-MELWFDINSHLFPIYVGDSLNLSI--------YTISDE----SFNSTIKDNQFSYLVDKYEYFMIGKVFNII---TSIERET-SFNLIYASFGGLLLKLKVKKKYLKSFLPNSHLCLGLNR
RPB8_SCHPO/8-125 DEIFTVTSVDK--QKYQRVSRITAVSGQND-MNLTLDINSQIYPLEKDATFSLQITSNL--------NS--------------PD-LKEAADYIMYGKVYRVE--EAK---DE-KVS-VYVSFGGLLMAIEGSHRKLYRLSLDH-VYLLLRR
RPB8_YEAST/7-146 DDIFQVSEVDP--GRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSLNLEDTPANDSSATRSWRPPQAGDR-S-LADDYDYVMYGTAYKFE--EVS---KD-LIA-VYYSFGGLLMRLEGNYRNLNNLKQEN-AYLLIRR
Q9VNZ3_DROME/7-146 EDIFNVKDMDPEGKKFDRVSRLHCESESFK-MDLILDINSWLYPMELGDKFRLVLATTL-REDGCPDSG----EYNP--MEHEGT-RADSFEYVMYGKIYRIEGDEAH-NEAS-RLS-AYVSFGGLLMRLQGDANNLHGFEVDQHMYLLMKR
RPB8_HUMAN/7-147 EDIFDVKDIDPEGKKFDRVSRLHCESESFK-MDLILDVNIQIYPVDLGDKFRLVIASTL-YEDGTLDDG----EYNP--TDDRPS-RADQFEYVMYGKVYRIEGDETSTEAAT-RLS-AYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKK
Q9M1A8_ARATH/9-145 EDIFVVDKLDPDGKKFDKVTRVEARSHNLE-MFMHLDVNTEVYPLAVGDKFTLAMAPTLNL-DGTPDTG----YFTP---GAKKT-LADKYEYIMHGKLYKIS--ERD--GKTPKAE-LYVSFGGLLMLLQGDPAHISHFELDQRLFLLMRK