EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03870 alignment
(6 sequences with 456 bp)


Q40944_CHLS6/11-145 AACGATATTATCAAAATACTAAGTAAAGACCCTGATGGAAAGCTTTATGAGAAAGTTTCTAGAATTATTGCACAAAGTTATTATTTAAAC---ATGGAACTGTGGTTTGATATAAACTCTCATCTGTTTCCGATTTACGTTGGTGATTCATTAAACTTATCTATT------------------------TATACTATCAGCGATGAA------------TCATTCAATAGTACTATTAAAGATAATCAATTTAGTTACCTTGTTGATAAATATGAATATTTTATGATAGGCAAAGTCTTTAACATTATT---------ACTTCTATAGAAAGAGAAACT---TCTTTTAATTTAATTTATGCCTCTTTTGGTGGACTACTCTTAAAACTCAAAGTCAAAAAGAAATACTTAAAATCTTTTCTACCAAATAGTCATTTATGTTTAGGATTAAATCGA
RPB8_SCHPO/8-125 GATGAGATTTTTACAGTCACTTCAGTTGATAAA------CAAAAGTATCAAAGAGTTTCACGAATTACGGCTGTCTCAGGCCAAAATGAC---ATGAATCTTACTCTTGACATTAATTCGCAAATTTATCCTTTAGAAAAGGATGCAACCTTTAGTTTGCAAATCACAAGCAATTTG------------------------AATAGC------------------------------------------CCTGAT---TTAAAGGAAGCTGCTGATTATATTATGTATGGAAAAGTCTATCGGGTGGAA------GAAGCTAAA---------GATGAG---AAAGTATCT---GTTTATGTAAGCTTTGGCGGTTTATTGATGGCAATTGAGGGCTCTCATAGAAAATTGTATCGTTTGTCATTAGACCAT---GTTTATCTATTACTTAGAAGG
RPB8_YEAST/7-146 GATGATATATTCCAAGTCTCGGAAGTTGATCCC------GGTCGTTATAACAAAGTCTGCCGTATCGAAGCCGCATCTACCACTCAGGACCAATGCAAACTAACCTTGGATATAAATGTTGAATTGTTTCCCGTCGCCGCACAAGATTCTTTGACAGTGACTATTGCATCCTCTTTAAACCTCGAAGACACCCCAGCTAACGACTCTTCTGCGACAAGAAGCTGGAGACCTCCACAGGCTGGTGACAGA---TCC---CTTGCAGATGATTATGATTACGTCATGTATGGTACCGCTTACAAGTTTGAG------GAAGTAAGC---------AAGGAT---CTAATTGCC---GTTTACTACTCATTCGGTGGCCTCTTAATGAGATTAGAAGGTAACTATAGAAATTTGAATAACTTGAAGCAAGAGAAC---GCTTATCTTTTGATTCGTCGT
Q9VNZ3_DROME/7-146 GAGGACATCTTCAACGTAAAGGACATGGATCCGGAGGGCAAAAAGTTCGACCGTGTATCCCGCCTGCACTGCGAGTCCGAGTCGTTTAAG---ATGGACCTCATCCTGGACATCAACTCGTGGCTATACCCCATGGAGCTGGGCGACAAGTTCCGCCTGGTTTTGGCCACCACCCTG---CGCGAGGATGGTTGCCCGGACAGCGGG------------GAGTACAATCCA------ATGGAGCACGAGGGAACG---CGGGCGGACAGCTTTGAGTACGTGATGTACGGCAAGATCTACAGGATCGAGGGCGACGAAGCACAC---AATGAGGCCTCC---CGGCTCTCC---GCCTACGTGTCATTCGGCGGCTTGCTGATGCGACTTCAGGGTGACGCCAACAATCTTCATGGCTTCGAGGTGGACCAGCACATGTACCTGCTGATGAAGCGG
RPB8_HUMAN/7-147 GAGGATATTTTCGATGTGAAGGATATTGACCCGGAGGGCAAGAAGTTTGACCGAGTGTCTCGACTGCATTGTGAGAGTGAATCTTTCAAG---ATGGATCTAATCTTAGATGTAAACATTCAAATTTACCCTGTAGACTTGGGTGACAAGTTCCGGTTGGTCATAGCTAGTACCTTG---TATGAAGATGGTACCCTGGATGATGGT------------GAATACAACCCC------ACTGATGATAGGCCTTCC---AGGGCTGACCAGTTTGAGTATGTAATGTATGGAAAAGTGTACAGGATTGAGGGAGATGAAACTTCTACTGAAGCAGCAACA---CGCCTCTCT---GCGTACGTGTCCTATGGGGGCCTGCTCATGAGGCTGCAGGGGGATGCCAACAACCTGCATGGATTCGAGGTGGACTCCAGAGTTTATCTCCTGATGAAGAAG
Q9M1A8_ARATH/9-145 GAGGATATCTTCGTGGTCGATAAGCTAGACCCTGATGGCAAAAAGTTCGATAAAGTTACGCGTGTTGAAGCAAGGAGCCACAACTTGGAA---ATGTTTATGCATTTAGATGTTAACACTGAGGTTTATCCATTGGCTGTTGGTGATAAGTTCACGCTGGCTATGGCTCCCACGCTTAATCTC---GATGGAACTCCTGATACCGGA------------TACTTTACTCCG---------GGAGCAAAGAAAACA---CTTGCAGATAAGTATGAATACATCATGCACGGGAAGCTTTACAAGATCTCT------GAGCGTGAC------GGCAAAACTCCAAAAGCAGAG---TTATATGTTTCGTTCGGGGGGCTCCTGATGTTGCTTCAGGGAGATCCAGCTCATATTTCTCACTTCGAACTTGACCAGAGGCTCTTTCTACTCATGAGGAAG