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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03870 - RNA_pol_Rpb8)
RNA polymerase Rpb8
(Pfam reference: accession no. PF03870)
(Interpro reference: accession no. IPR005570)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 152 aa
(ave. pairwise identity: 0.45)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.49)
nucleotides
(available for above)
6 sequences @ 456 bp
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 2.66)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 152 aa
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 3.14)