EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF03859 - CG-1)
CG-1 domain
(
Pfam
reference: accession no.
PF03859
)
(
Interpro
reference: accession no.
IPR005559
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 123 aa
(ave. pairwise identity: 0.54)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.48)
nucleotides
(available for above)
6 sequences @ 369 bp
(ave. pairwise identity: 0.56)
New Hampshire format
(total tree length: 2.16)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 123 aa
(ave. pairwise identity: 0.54)
New Hampshire format
(total tree length: 2.48)