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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03738 alignment
(7 sequences with 447 aa)


Q9ZMK1_HELPJ/1-390 MQV-IPLKPLDNKTLEEIGLDWHTN-.-DDMSSYIADEMVVVSQKEADA----YYDACNELYDMFVETAEEAIKND-------RFFELDIPNALIPMIKQSFEEEVHWH---IYGRFDLAGGLDGKPIKLLEFNADTPTMLYETAVIQWALLKAN--------GYD--ENKQFNNLYEALGENFKRMVTLGEDTSRFEEMYEGWKILFSSVRGN-----IEEERTMRFLQDVAQSVGFETDFSYIDEVEFNV-EEGVFKNGLN--HEFLFKLIPWENIAIDEPEL--ALLMQGMMENKNTIFLNPAYTILFQSKRFLKLLWDRYPK---HPLLLETSYEPLA---------NKKQIKKVAFGREGANSEIFEASMQSLLKTDGV-----YSNHKPIYQEFYELNSHNGLYYQPN-VFFAYESCALGFRKG-GLILDNFSKFVSHRLQ
Q9PID0_CAMJE/1-388 MQL-LQVDKLQKDYLENIGFSWHTD-.-EDGSDYISNKLVCVKESEANA----YYEAVNELYDMFIAAAQEVINND-------RFDELGIPFNLIDAIKMSWENEVHWH---LYGRFDLAGGLDGKPIKLIEFNADTPTALFESAILQWALLKQN--------GMD--ESAQFNSIYESLMDNFKRLITLDESVEGFEEHYQGWKILFSSVAGS-----KEEEITTKLLAHIANEAGFQTNFSFVDEVEFS--EEGIFKEGEN--YEYWFKLIPWEDIAIEEGEL--AMLLTQIMRNQRAIILNPAYTLLFQSKGILKILWELYPN---HPLLLETKDTPLE---------GKNYVKKPVFGREGANISIIKD-GKTLHENVGP-----YGNNKAIYQEYVEFNSCENEYYQAG-VFFAYEGCGLGFRKG-GLVLDNYSKFVGHIIK
Q9A5T6_CAUCR/3-386 RLS-LTPRPNWEQQAEAVGFTWRHA-.-DGRRYWDERAAYAFTLGEVEGH---LEPATEALHKLCLELVEDAVKSDA------LMARLQIPETARDVVAASWTARDPS----LYGRFDFFYDGDG-PPKLYEYNADTPTSIYEAGVFQWLWLEDMIQ-----QGALPEATDQFNSLHDQLAERFKAIFP------------NGGFVHFASDPDF-----VEDRQTVRFLEDMGRLAGLEPKFVPTTAIGLD--ADGRFVDQDNYIIGALFKLYPWEDMLREP--------YAANIAGSKTLFLEPPWKAVLSNKAMLPLLWERHPG---HPNLLETYFDDDPKVER----LGSSYARKPLFSREGANIELWKD-GRKGRVLDQG-----YGAEGWIRQELKPPPKFGVNYPVVGSWVIGDQPAGVGVREDRSRVTRDRSRFIPHIIE
YJFC_ECOLI/3-386 RHN-VPVRRDLDQIAADNGFDFHII-.-DNEIYWDESRAYRFTLRQIEEQ---IEKPTAELHQMCLEVVDRAVKDEE------ILTQLAIPPLYWDVIAESWRARDPS----LYGRMDFAWCGNA-PVKLLEYNADTPTSLYESAYFQWLWLEDARR-----SGIIPRDADQYNAIQERLISRFSEL-------------YSREPFYFCCCQDT-----DEDRSTVLYLQDCAQQAGQESRFIYIEDLGLG--VGGVLTDLDDNVIQRAFKLYPLEWMMRDD--------NGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPG---HPNLLASWFDGEK-PQIA---AGESYVRKPIYSREGGNVTIFDGKNNVVDHADGD-----YADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIA
YGIC_ECOLI/3-385 RVS-ITERPDWREKAHEYGFNFHTM-.-YGEPYWCEDAYYKLTLAQVEK----LEEVTAELHQMCLKVVEKVIASDE------LMTKFRIPKHTWSFVRQSWLTHQPS----LYSRLDLAWDGTG-EPKLLENNADTPTSLYEAAFFQWIWLEDQLN-----AGNLPEGSDQFNSLQEKLIDRFVELREQ----------YGFQLLHLTCCRDT-----VEDRGTIQYLQDCATEAEIATEFLYIDDIGLG--EKGQFTDLQDQVISNLFKLYPWEFMLREM--------FSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPN---HPNLLPAYFAEDDHPQM------EKYVVKPIFSREGANVSIIEN-GKTIEAAEGP-----YGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFV
YGIC_HAEIN/3-392 RVTGFPTRPDMVQQLLNVGFDYYNLPsSDGSHYWSDNVAYEFTLAEIDR----IEDTTNELHSMCLDFAADEIKKG-------DYENYHFTELQKQLIETSWRNQEPY----LYGRFDFGYDGNN--LKMFEYNADTPTSLLEAAVVQWQWLEQI-------EGLK--HRDQFNWIHEELIKHFQFLKQQ----------SGKTDFHLSAMQDAG----REDWGNVDYLADVAYNAGWNIHQLAVEDIGYNS-ETKKFVDLNDQPIEMLFKLYPLEWLSHAE--------FARHITTAETRFIEPAWKMLLSNKALLAKLWARYPN---HPHLLPAYFTPFELPKD-----LSMWVKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFV
Q55658_SYNY3/2-440 QPIKISRRPRWRQHIQDNAYQADVLS.DPAQKYWVEALPQPFAIQFSPQEETAIAIASEKLWQMCVEFLDWFFDEDDDSAVDARLAQLKIRPEYWPALKKSWHRTDPVEDLSLATRFDLVVTEDG-QIKLIEINGETP-LLGAETVYQWNWLVDYQRNHNQGAYALPANASQFNEYWERTAGQWRRIYEEYDLLRTGISFLVDEQLEEDSEMAMQLIQILHDEVDENVYTQLVYLRGLEDERGQLMQRGLGLDEDGYFIDHANERIPILWKMYDWSDLQNDMANAGCTEALAQRLAVGDAKVIEPLWKQILSNKGTMALIWQQFKDSEYAEYLLPTYFESDISLEATRLLLEGLHVRKPLLGMEGIGVSIELGAGAVEKRPTYG-----YGEEGFIIQEYIELPQAFDYHYMVGSWVIDDVAAGIILRGDTARITGRHCLIIPHIVA