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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03725 phylogeny
for nucleotide alignment


 
(((((((((((ECX2_ARCFU/182-248,(RRP45_YEAST/191-271,Q20128_CAEEL/189-257)),(RRP43_SCHPO/203-269,RRP42_YEAST/183-254)),(RRP43_YEAST/322-384,MTR3_YEAST/199-250)),RRP46_YEAST/162-234),(EXOS4_CAEEL/150-215,(RRP41_SCHPO/154-218,RRP41_YEAST/156-220))),EXOS7_HUMAN/196-262),((O32966_MYCLE/501-579,((PNP_ECOLI/459-529,((O24288_PEA/589-665,O25812_HELPY/457-527),PNP_BACSU/459-529)),P72659_SYNY3/470-540)),(((((PNP_ECOLI/147-211,Q41370_SPIOL/220-284),PNP_BACSU/146-210),Q53597_STRAT/154-219),P72659_SYNY3/145-209),O25812_HELPY/143-212))),((ECX1_METTH/157-222,ECX1_ARCFU/157-225),ECX2_METTH/191-257)),RNPH_CAUCR/157-224),(RNPH_BACSU/157-225,RNPH_MYCTU/160-227)),RNPH_PSEAE/158-225,RNPH_ECOLI/157-224);
(((((((((((ECX2_ARCFU/182-248:0.54974,(RRP45_YEAST/191-271:0.56979,Q20128_CAEEL/189-257:0.62239):0.12957):0.17562,(RRP43_SCHPO/203-269:0.50969,RRP42_YEAST/183-254:0.59607):0.15335):0.19755,(RRP43_YEAST/322-384:0.60815,MTR3_YEAST/199-250:0.84527):0.17824):0.05046,RRP46_YEAST/162-234:0.54961):0.06077,(EXOS4_CAEEL/150-215:0.52985,(RRP41_SCHPO/154-218:0.32979,RRP41_YEAST/156-220:0.52331):0.25709):0.30059):0.09139,EXOS7_HUMAN/196-262:0.71150):0.21882,((O32966_MYCLE/501-579:0.19356,((PNP_ECOLI/459-529:0.23633,((O24288_PEA/589-665:0.34859,O25812_HELPY/457-527:0.31201):0.08745,PNP_BACSU/459-529:0.19696):0.08208):0.05433,P72659_SYNY3/470-540:0.31479):0.08865):0.30798,(((((PNP_ECOLI/147-211:0.30730,Q41370_SPIOL/220-284:0.42026):0.06263,PNP_BACSU/146-210:0.31466):0.04080,Q53597_STRAT/154-219:0.45477):0.07934,P72659_SYNY3/145-209:0.30239):0.05313,O25812_HELPY/143-212:0.68741):0.25062):0.17828):0.04525,((ECX1_METTH/157-222:0.36031,ECX1_ARCFU/157-225:0.29707):0.12830,ECX2_METTH/191-257:0.67140):0.05394):0.20975,RNPH_CAUCR/157-224:0.28064):0.07108,(RNPH_BACSU/157-225:0.42724,RNPH_MYCTU/160-227:0.33207):0.05579):0.09303,RNPH_PSEAE/158-225:0.17646,RNPH_ECOLI/157-224:0.24469);