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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03725 phylogeny
for amino acid alignment


 
((((((((((((Q20128_CAEEL/189-257,MTR3_YEAST/199-250),(RRP43_SCHPO/203-269,RRP45_YEAST/191-271)),((RRP42_YEAST/183-254,ECX2_ARCFU/182-248),(ECX2_METTH/191-257,EXOS7_HUMAN/196-262))),RRP43_YEAST/322-384),(((PNP_BACSU/146-210,(P72659_SYNY3/145-209,(PNP_ECOLI/147-211,(Q41370_SPIOL/220-284,Q53597_STRAT/154-219)))),O25812_HELPY/143-212),RRP46_YEAST/162-234)),(EXOS4_CAEEL/150-215,(RRP41_SCHPO/154-218,RRP41_YEAST/156-220))),(PNP_BACSU/459-529,(P72659_SYNY3/470-540,(O32966_MYCLE/501-579,(PNP_ECOLI/459-529,(O24288_PEA/589-665,O25812_HELPY/457-527)))))),(ECX1_METTH/157-222,ECX1_ARCFU/157-225)),RNPH_MYCTU/160-227),RNPH_BACSU/157-225),RNPH_CAUCR/157-224),RNPH_PSEAE/158-225,RNPH_ECOLI/157-224);
((((((((((((Q20128_CAEEL/189-257:0.84153,MTR3_YEAST/199-250:2.98589):0.00000,(RRP43_SCHPO/203-269:0.91915,RRP45_YEAST/191-271:0.65785):0.45416):0.42888,((RRP42_YEAST/183-254:1.23581,ECX2_ARCFU/182-248:1.10388):0.00000,(ECX2_METTH/191-257:0.81726,EXOS7_HUMAN/196-262:0.75478):0.28124):0.10916):0.17842,RRP43_YEAST/322-384:1.17083):0.16497,(((PNP_BACSU/146-210:0.19136,(P72659_SYNY3/145-209:0.36977,(PNP_ECOLI/147-211:0.41429,(Q41370_SPIOL/220-284:0.24785,Q53597_STRAT/154-219:0.65502):0.11619):0.10397):0.17831):0.34792,O25812_HELPY/143-212:0.45860):0.45869,RRP46_YEAST/162-234:1.11636):0.24073):0.16168,(EXOS4_CAEEL/150-215:0.65841,(RRP41_SCHPO/154-218:0.43940,RRP41_YEAST/156-220:0.66273):0.21574):0.64553):0.10977,(PNP_BACSU/459-529:0.00000,(P72659_SYNY3/470-540:0.39217,(O32966_MYCLE/501-579:0.46936,(PNP_ECOLI/459-529:0.19617,(O24288_PEA/589-665:0.30321,O25812_HELPY/457-527:0.35428):0.15396):0.08696):0.07335):0.12545):0.89326):0.14496,(ECX1_METTH/157-222:0.52121,ECX1_ARCFU/157-225:0.38191):0.18575):0.55062,RNPH_MYCTU/160-227:0.45449):0.02173,RNPH_BACSU/157-225:0.32590):0.09439,RNPH_CAUCR/157-224:0.47189):0.14220,RNPH_PSEAE/158-225:0.24380,RNPH_ECOLI/157-224:0.25629);