EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03723 alignment
(9 sequences with 798 bp)


SSP2_BOMMO/446-678 AAGCCTTACACTCAAGACAAACTTTACTTTGATGGTGTCAAGATAACTGATGTTAAAGTCGACAAATTGACAACATTCTTCGAGAACTTTGAATTCGACGCCAGCAACAGCGTG------TACTTTAGTAAGGAGGAGATTAAGAACAAT---CACGTCCATGAGTTAAGGTGCGCCACA---CGATTGAACCACAGCCCCTTCAACGTTAACATTGAGGTTGATTCT------AATGTCGCCAGTGACGCTGTTGTCAAAATGTTGCTGGCCCCCAAATACGATGACAACGGAATACCTCTCACATTAGAGGACAACTGGATGAAATTCTTCGAGTTGGACTGGTTCACAACTAAACTCACCGCTGGTCAGAACAAGATTATCCGCAATTCGAATGAATTTGTCATATTTAAAGAAGACTCCGTGCCAATGACTGAAATTATGAAGATGCTCGACGAAGGAAAAGTACCT...---------TTTGATATGTCGGAAGAGTTCTGTTAC------------ATGCCTAAAAGACTCATGCTGCCTAGAGGTACTGAAGGTGGATTCCCATTCCAGCTCTTTGTTTTCGTCTATCCATTCGAC---------------------------------------AACAAAGGCAAGGACTTGGCTCCTTTC...GAA---TCTTTTGTTCTTGACAATAACCTCTTGGCTTCCCTCTGGATCGCCCCGTTGTTG------ATGCATTATTCAAGGTTCCTA---ACATGTATTTCAAGG---ATATTTTCATTTACCACG
ARYB_MANSE/446-680 CAACCGTACTCTTCAGAAAAACTGGCATTCAAGGGTGTCAAGGTGGTCGATGTTGTAGTAGACAAACTGGTTACCTTCTTCGAGTACTACGACTTTGATGCGTCCAACAGCGTT------TTCTGGAGCAAAGAGGAGGTTAAATCTAGC---TACCCCCATGATTTCAAGATCCGTCAGCCACGCCTTAACCACAAGCCATTCTCTGTCTCTATCGACATCAAATCT------GAAGCTGCCGTTGATGCCGTTGTCAAGATATTCATGGCACCTAAATACGACGATAATGGATTCCCTCTGAAATTAGAAAACAACTGGAACAAATTCTTCGAGCTGGACTGGTTCACATACAAATTTGTTGCTGGTGACAACAAAATCGTGAGGAACTCAAACGACTTCTTGATCTTCAAGGACGACTCTGTTCCCATGACTGAGTTGTACAAATTATTAGAACAAAATAAGGTTCCA...---------CACGACATGTCCGAGGATTACGGCTAC------------CTGCCTAAAAGACTGATGCTGCCAAGAGGTACTGAGGGTGGCTTCCCATTCCAGTTCTTCGTTTTCGTATATCCATTCAAC---------------------------------------GCTGACAGCAAAGATCTTGCACCGTTC...GAG---GCCTTCATCCAGGACAACAAACCTTTGGGCTATCCATTCGACCGTCCCGTTGTT------GACGCTTACTTCAAGCAACAC---AACATGTTCTTCAAGGACGTCTTCGTATACCATGAC
ARYA_MANSE/449-682 CAGCCCTACAACCAAAACGATTTGCACTTCGTTGGTGTAAAGATTAGCGACGTCAAAGTAGACAAATTGGCCACATACTTCGAATATTACGACTTTGACGTCAGCAACAGCGTA------TTTGTAAGCAAGAAGGACATCAAGAAC------TTCCCCTACGGTTACAAGGTCCGTCAGCCCCGCCTTAATCACAAACCATTCTCTGTCTCCATCGGCGTCAAATCT------GATGTTGCTGTTGATGCAGTTTTCAAGATTTTCTTAGGTCCTAAATACGACAGCAATGGCTTCCCAATTCCATTGGCTAAGAACTGGAATAAATTCTACGAACTGGATTGGTTCGTGCACAAGGTCATGCCTGGGCAGAACCACATCGTCCGCCAGTCCAGTGACTTCCTATTCTTTAAGGAGGACTCTCTGCCCATGTCTGAGATCTACAAACTGCTTGACGAAGGCAAAATACCC...---------TCTGACATGTCAAACTCATCCGACACG------------CTGCCTCAGAGATTGATGCTGCCAAGAGGTACCAAGGACGGTTATCCATTCCAATTGTTCGTGTTCGTGTACCCGTACCAG---------------------------------------GCTGTGCCTAAGGAGATGGAGCCATTC...AAG---TCGATTGTGCCAGACAGCAAGCCTTTCGGATATCCGTTCGACCGCCCCGTCCAC------CCTGAATACTTCAAGCAGCCC---AACATGCACTTCGAGGATGTGCACGTTTACCACGAG
SSP1_BOMMO/448-700 CCGAAATATACTCGCGAACAGTTCAGCTTCCCCGGAGTCAAAGTGGAGAAAATTACCACCGATGAGCTGGTCACATTCGTTGATGAGTACGACATGGACATTAGCAACGCTATG------TACCTGGACGCAACTGAGATGCAGAACAAGACATCCGATATGACCTTTATGGCCCGCATGCGCCGCCTCAATCACCATCCGTTCCAGGTGTCGATTGATGTCATGTCC------GACAAAACTGTCGATGCTGTGGTCCGCATCTTCCTGGGTCCCAAGTACGACTGCATGGGCAGGCTCATGAGCGTCAACGACAAACGCCTCGACATGTTCGAGCTGGACAGCTTTATGTACAAACTGGTCAACGGAAAGAACACCATCGTCCGTAGCTCCATGGATATGCAAGGATTTATCCCAGAGTACCTTTCGACTCGTCGTGTAATGGAAAGCGAAATGATGCCTTCCGGA---...GATGGCCAGACAATGGTCAAGGACTGGTGGTGCAAGTCTCGCAACGGATTCCCTCAGAGACTTATGCTGCCCCTCGGTACGATTGGAGGTTTGGAGATGCAGATGTACGTCATCGTGTCGCCGGTCCGC------ACCGGTATG---CTCTTGCCCACATTGGACATGACCATGATGAAGGACCGTTGTGCTTGT...CGCTGGAGCTCATGTATCTCCACCATGCCTCTCGGATATCCATTTGACAGACCGATTGAC------ATGGCGAGCTTCTTCACTAGC---AACATGAAGTTCGCTGACGTAATGATCTACAGAAAA
JSB1_TRINI/445-698 CCTAAGTACACCCGCGAGGACTTCGACTTCCCCGGTGTTAAAATCGAGAAGTTCACCACCGACAAACTCACCACCTTCATCGATGAATACGACATGGACATCACCAACGCCATG------TTCCTTGACGATGTTGAGATGAAGAAGAAGCGCTCTGACATGACCATGGTTGCCCGCATGGCCCGCCTCAACCACCACCCCTTCAAGGTCACCGTTGATGTCACCTCC------GACAAGACTGTCGACTGTGTTGTCCGCATCTTCATCGGTCCCAAATACGACTGCCTCGGCCGCCTCATGAGCGTCAACGACAAACGCATGGACATGATTGAAATGGACACCTTCTTGTACAAACTGGAGACTGGAAAGAACACCATCGTCCGCAACTCCCTGGAGATGCACGGTGTCATCGAGCAGAGGCCATGGACCCGCCGCATTCTCAACAACATGATCGGCACAGTCGGAACTatcAGCAAGACCGTCGACGTTGAGAGCTGGTGGTACAAG---AGGCATCGGCTTCCGCACAGGATGCTCCTGCCCCTGGGTCGCCGCGGTGGCATGCCCATGCAGATGTTCGTCATCGTCACCCCCGTCAAG------ACCAACCTG---CTCCTCCCCAACCTGGACATGAACATCATGAAGGAACGCAAGACTTGT...GCTGGAGCGTCTGTTTCGACACGATGCCGCTCCGGCTTCCCCTTCGACAGGAAGATCGAT------ATGACTCACTTCTTCACTCGT---AACATGAAGTTCACCGATGTGATGATCTTCAGGAAG
ARY1_CALVI/485-736 AAGCCCTACACTCACGAAGAATTGTTGTTCCCTGGTGTTACCATAAAGGACGTTAAGGTTTCTGAATTGGTTACCTACTTCGATTTGGTCGACTTTGATGTCACCAACTTGATGAACGATGAGATGACTTTCGTTGATGGTCAATTCGTT---TGGGACAAGACCTTGTTGGCACGTCAAATGCGCCTCAACCACAAGCCTTTCGACTTCGATTTCGTTATTGAATCT------GACAAATCCCACAAGGTTGTTATCCGCACTTTCTTGGGTCCCAAATACGACGAATTCGGCCGTGTCATCACATTGACTGAAAACCGTCAAAACTTCATGGAAATTGACAGCTTCATCTACACCCTTAAATCTGGTGTCAATGAGTTCAAACGCCTCTCCAAGGACTTTTACTGGACCGTTGAGGACCGCACCACCTACAATGAATTGTACAAGTATGTCATGCTTGCTTTGCAAGGC...------AAATACGACTTCCCCTTGGACATCAGCGAACCCCATTGTGGTTTCCCCGATCGTTTGGTTTTGCCCCATGGTTGGTACAAGGGTATGCCCATGCAATTCTTCTTCTACATTGCACCCTACACTGCCTCCTACGAACCC---------------TTCTCCACTTACGACTCCACTTACGCTTGCGGTATTggcTCTGGCGTTCGTCATATCGATGAAATGCCTTTCGGTTATCCCTTCGATCGTGAAATCGAC------GAATACGAATTCTTCGTACCC---AACATGTACTTCAAGGATGTCAAGATCTACCACCAA
HCYE_EURCA/374-620 CCTCATTACACTCCAGAAGATTTGACATGTCCAGGAGTTCACGTAGTCAACGTAACAGTGAATGCCAAGGTTCCAAATGTGGTAACAACTTTCATGAAGGAAGCT---------------GAACTGGAACTCTCATATGGCATCGACTTCGGAAGTGACCATTCTGTGAAGGTACTGTACCGCCACTTGGATCACGAACCCTTCACTTACAACATCAGCGTCGAGAACTCATCTGGTGGTGCTAAGGACGTGACAATGCGTATTTTCCTCGGCCCTAAGTATGACGAATTGGGCAACCGTCTGCAACCAGAACAGCAGAGGACCCTGAACATCGAACTGGACAAGTTCAAGGCCACTCTCGACCCTGGTAAGAACGTCGTCACACGTGACCACCGTAATTCAACTGTAACTGTTGAACAAAGCGTCCCAGTAAAGAAACTGCGTGAGGAAGGAGGCGTTGCTGGA------...------------------------------GAATACTGCAGCTGCGGATGGCCTGAACACATGCTCATCCCCAAAGGAAACCACAGGGGCATGGACTTCGAACTCTTCGTCATTGTAACAGACTACGCTCAGGATGCTGTCAACGGACACGGAGAAAATGCCGAATGTGTGGATGCTGTGAGCTACTGCGGAGCC...AAGGACCAGAAGTATCCTGACAAGAAGCCCATGGGATTCCCATTCGATAGAGTCATCGAAGGATTGACCCTTGAAGAATTTCTAACTCCGAGCATGAGCTGCACTGATGTCAGGATTAAGTACACC
HCYD_EURCA/376-622 CCAAGCTACACTCACCAGCAGTTGGACTTCCCAGGAGTTCGTATATCAAGGGTGACTGTGAGGAGCAAAGTTCCGAATCTTATCCACACCTACTCCAAGGATTCC---------------CTTCTCGAACTGTCCCACGGAATCAACCTC---AAAGGGCAC---ATTCAGGTCAAATATGAACACTTGGACCACGAACCATACAACTACGAGATCGAGGTAGACAACAGGACCGGTGAGGCCAGGGAAACCTGTGTTCGAATCTTTTTGGCTCCCAAGTACGATGAATTGGGCAACCGACTGATCCTGGAAGAGCAACGAAGACTGTACATAGAACTGGACAAGTTCCATCGCAGACTGGAACCAGGCAAGAATGTGCTGGTTAGAGCATCAGGAGATTCCTCAGTAACTCTGTCGAAAGTACCAACTTTCGAAGAATTGGAATCTGGCAATGCTAACGTCAACCCG---...------------------------AAC---GAGTACTGCAGTTGTGGATGGCCTGAGCACATGCTCGTACCCCGAGGAAAGGAAAGGGGAATGGACTTCTATTTGTTCGTCATGCTTACCGATTATGAGGAAGATAAGGTTCAGGGTGCCGGAGAACAGACCATCTGCTCGGACGCCGTAAGTTACTGTGGAGCC...AAGGACCAGAAATATCCTGATAAGAAGGCTATGGGTTATCCCTTCGATCGTCCCATCCAGGTCCGTACCCCAAGTCAGTTCAAGACACCCAACATGGCCTTCCAAGAGATCATTATCCAATACGAA
HCYA_EURCA/380-629 CCAGTGTACAGCAAGGACAATCTGGACTTCCCTCAAGTAACCATAACGGATGTCAAGGTGAAAGCCAAAATTCCCAATGTCGTGCACACTTTCATCAGGGAGGAT---------------GAACTGGAACTTTCCCACTGCTTACACTTCGCCAAGCCTGGATCTGTCCGAGCAAGATACCATCATTTGGATCACGAATCTTTCTCCTACATCATCAGCGCCCAGAACAACAGCAATGCTGACAAGCAGGCAACTGTTCGAATCTTCCTGGCCCCCACATACGATGAACTCGGAAATGACATCTCACTAGACGAACAGAGGAGACTGTACATTGAAATGGACAAATTCTATCACACTTTGCGTCCTGGCAAGAACACTATTGTAAGATCCTCCACTGACTCAAGCGTAACACTGTCATCAGTCCATACTTTCAAGGAACTTCTTCGTGGAGAGGATCTCGTTGAAGGC---...------------------------CAGACCGAATTCTGCAGCTGTGGTTGGCCCCAGCATCTCCTGGTACCTAAAGGCAATGAGAAGGGAATGCAGTTTGACCTCTTCGTCATGCTGACAGATGCCTCTGTTGATAGGGTACAAAGTGGTGATGGCACTCCCCTTTGCGCTGATGCACTCAGCTACTGCGGTGTC...TTGGACCAGAAATACCCAGACAAGAGAGCTATGGGTTATCCATTTGATAGGAAGATTACTGCGGACACTCATGAAGAATTCCTGACAGGAAATATGAACATTTCCCACGTCACAGTCCGCTTCCAA