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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03720 alignment
(25 sequences with 129 aa)


Y428_METJA/311-402 AIFGVTYKGNVDDTRESPAEKVVSKLIDEG..FEVKCYDKYAR-----.----.-........--------DFIYP---LNSLDEAVEGADIIVILAEHDEYKNFDKEDIKNIASK----VKNKIILDT
P72381_STAAU/308-395 TVFGLTYKGDVDDIRESPAFDIYELLNQEPd.IEVCAYDPHVEL----.----.-........--------DFVE-----HDMSHAVKDASLVLILSDHSEFKNLSDSHFD----K----MKHKVIFDT
WECC_ECOLI/324-415 ACFGLAFKPNIDDLRESPAMEIAELIAQWHs.GETLVVEPNIHQ----.----.-........------LPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVH-----------QQYVVDA
EPSD2_RALSO/322-412 ACFGLSFKANIDDLRESPAIEIVRTMVQQQl.GTVLVVEPHIKV----.----.-........------LPASLEG-VELLNAEPALSRADIVVLLVDHQKFRKLDTDRLQ-----------SRVVIDT
UGDH_SOYBN/328-452 AILGFAFKKDTGDTRETPAIDVCQGLLGDK..ANLSIYDPQVTEDQIQrDLSMnKfdwdhpihLQPT-SPTTVKKVSVVW-DAYEATKDAHGLCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIVDA
UGDH_DROME/328-444 AILGFAFKKNTGDTRETAAITVCQTLLEEG..AALDIYDPKVEPEQIIdDLTH.-........PSVTESPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDH
UGDH_CAEEL/339-452 AIFGFAFKKNTGDTRESSAIHVIKHLMEEH..AKLSVYDPKVQKSQMLnDLA-.-........-SVT-SAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQ
UDG_RICPR/314-417 AILGLTYKAGTDDVRASPAIEIITILLNKD..VYVKAFDPIGLEN---.----.-........----AKKNLEHKNLLYFASAVEACKSVDIIVIATEWSEFKELNWQEIYNLVKS-PMIIDLRNILDN
P96718_BACSU/313-415 ALLGLSFKPNTDDMREAPSIVIADRLAALD..ARIRAYDPIAVS----.----.H........-----AKHVLPQAVEYKETIEEAVKGSDAVMILTDWADIKQFPLAAYQDLMET-PLIFDGRNCYTL
TUAD_BACSU/314-416 SVLGLAFKPNTNDVRSAPALDIIPMLQQLG..AHVKAYDPIAIP----.----.E........-----ASAILGEQVEYYTDVYAAMEDTDACLILTDWPEVKEMELVKVKTLLKQ-PVIIDGRNLFSL
P72834_SYNY3/335-437 GLLGLTFKPDTDDMRDAPALNIIQQLNRLG..AKVKAYDPIVSQ----.----.S........-----GVSHGLSGVKIESTPAMLADQCDALILVTEWQEFLKLDFPVLASRMHQ-AVIIDGRNFLDK
O07248_MYCTU/322-423 AVLGAAFKPESDDVRDSPALNVAGQLQLNG..ATVHVYDPKALDN---.----.-........-----AHRLFPTLN-YAVSVAEACERADAVLVLTEWREFIDLEPADLANRVRA-RVIVDGRNCLDV
O34862_BACSU/312-412 AVLGISFKPNTDDIRNSQAVRLMERLAELG..CDVHAYDPEAVLP---.----.-........-------EHLRQHVTQHSQAFDAIEESDFLFLATEWSEFLAFDWKKAADIMKG-RLVIDGRNVLKK
O29659_ARCFU/359-453 GVLGLAFKPDTDDVRESRAIPIVKALLEEG..AEIIAYDPKAIE----.----.N........-----FRKFFPQ-VEYANSAEDVITKSDAVLIVTEWKEFEELDYSG--------KIVIDGRRVEKA
O31279_ACEXY/323-425 GVLGLTFKPETDDMREAASIPVLDMLDKGG..AKIRAFDPAG------.-MT-.-........---T-ARPVLPQSVTYCTDALDAAKGADILVVLTEWNEFRSLAPEKLAAEMKG-RKIADLRNIWDP
O26924_METTH/321-415 GILGVAYKGDVADARETPTRPLVAALLSEG..ARVLVNDPHVSP----.----.-........--------EIIRGMGVEPVSLEEALNSDCVVLMTDHTEYLEITPEMIPGG-----IFICTRPVMDP
Q54365_STRLN/312-409 ALAGLTYKAGHATLRDSLPLRLVRTLLTDG..AEVVAYDPVAED----.----.-........-------LPDDVGARRAATLADAVPAPNACLVAAALPELDGADWAGLRPAARL---VVDGCGALDP
ALGD_PSESH/317-419 ALLGLSFKAGTDDLRESPLVELAEMLIGKG..FDLSIFDSNVEYAR--.----.-........-----VHGANKDYIESKIPHVSSLLNSDFDQVINDSDVIILGNRDERFRALAN--KTPEGKRVIDL
ALGD_PSEAE/317-419 GLLGLSFKAGTDDLRESPLVELAEMLIGKG..YELRIFDRNVEYAR--.----.-........-----VHGANKEYIESKIPHVSSLLVSDLDEVVASSDVLVLGNGDELFVDLVN--KTPSGKKLVDL
ALGD_AZOVI/317-419 ALLGLSFKAGTDDLRESPQLELAEMLIGKG..FKLSIFDSNVEYAR--.----.-........-----DHGANGHYIKNEIPHVSALLQSDLDKVVAEADVIVLGNADPRFEKLAK--DVPAGKKVIDL
VIPA_SALTI/318-412 LILGFTFKENCPDIRNTRIIDVVKELGKYS..CKVDIFDPWVDA----.----.-........------EEVRREYG-IIPVSEVKSSHYDAIIVAVGHQQFKQMGSEDIRGFGKD------KHVLYDL
Q55042_SHISO/318-412 LVMGLTFKENCPDLRNTKVIDIISELKEYN..INIDIIDPWCST----.----.-........------DEAQHEYG-LTLCEDPKVNHYDAIIIAVAHNEFREMGESAIRALGKD----EARFVRF--
CAPL_STAAU/313-406 NVLGLTFKENCPDLRNTKVIHIIEELKEYG..LNVTVNDVEADK----.----.-........------NEAKKFFG-LDLIDTKELKMVDVVLFAVPHKDYMEN-KKDYINLVKD------CGIVFDI
UDG_STRPY/313-401 GVYRLIMKSNSDNFRESAIKDVIDILKSKD..IKIIIYEPMLN-----.----.-........-----KLESEDQS--VLVNDLENFKKQANIIVTNRYDNELQDVKNKVY-----------SRDIFNR
Q56812_XANCA/321-428 AVWGLAFKPNTDDMRAASSRRLMASCGKPVprCARTTPKPRTKPSAS-.----.-........---SASATTWRSATTPSPHWKRRRAGRGHRVEAVPQPGFRQDQAGSEGRRRVR--RPQPVRPAGDR