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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF03714 - PUD)
Bacterial pullanase-associated domain
(
Pfam
reference: accession no.
PF03714
)
(
Interpro
reference: accession no.
IPR005323
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
19 sequences @ 125 aa
(ave. pairwise identity: 0.32)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 12.15)
nucleotides
(available for above)
18 sequences @ 375 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 7.27)
amino acids, restricted set
(corresp. to available nt seqs)
18 sequences @ 125 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 10.49)