pandit
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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
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PF03705 phylogeny for restricted amino acid alignment |
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(((((((((((FRZF_MYXXA/5-61,(Q98PC8_RHILO/3-54,(((Q886T1_PSESM/1-57,Q842H1_PSEFL/1-56),Q88MS8_PSEPK/4-55),Q9HXT5_PSEAE/1-54))),((O85748_TREDE/198-250,P96124_TREPA/208-260),Q7X4X5_RHOCE/16-72)),((Q7NXP6_CHRVO/266-322,((Q88GG4_PSEPK/7-63,Q8PBD8_XANCP/7-63),(((Q7MDV2_VIBVY/10-66,Q8F5D9_LEPIN/60-116),Q8YVX1_ANASP/9-65),Q81H19_BACCR/18-74))),((Q7USG5_RHOBA/230-286,YH19_RHOCA/176-232),((Q7UK14_RHOBA/211-267,Q8P4M1_XANCP/228-284),(((Q8TK74_METAC/285-341,Q8TPC4_METAC/272-328),((Q7NFG3_GLOVI/214-270,Q8YW99_ANASP/159-215),Q7NJH8_GLOVI/220-276)),Q92W49_RHIME/203-259))))),(Q7NG43_GLOVI/37-93,Q8KLS6_RHOSH/5-61)),(((O33557_RHOSH/6-62,Q89SQ2_BRAJA/13-69),((Q51346_PSEAE/16-72,((CHER2_VIBCH/7-65,Q7X4Y2_RHOCE/31-90),Q8RAZ1_THETN/2-61)),(O51375_BORBU/5-61,O83638_TREPA/28-84))),((Q8F4J9_LEPIN/25-81,(((((Q7NSI7_CHRVO/24-80,(Q7MBQ3_VIBVY/20-76,CHER3_VIBCH/12-68)),(Q8P9J5_XANCP/19-75,(Q7WAA5_BORPA/19-75,Q8XQ81_RALSO/20-76))),((Q7NRT7_CHRVO/21-77,(Q8EF63_SHEON/8-67,CHER2_PSEAE/18-74)),((Q53129_RHOSH/18-74,(O85127_9RHIZ/25-81,O87716_CAUCR/23-79)),((Q7NV39_CHRVO/9-65,(Q888V6_PSESM/8-64,Q8P7A7_XANCP/15-71)),Q8EEQ2_SHEON/14-70)))),(CHER_ECOLI/23-79,Q7N5T2_PHOLL/27-83)),Q82TM4_NITEU/17-73)),((CHER_BORBU/15-71,CHER_CAMJE/8-63),((Q7VIZ7_HELHP/5-61,Q7M942_WOLSU/5-62),(CHER1_PSEAE/4-60,(((P72254_RHOCE/2-58,(Q9A2T4_CAUCR/2-58,Q9AAJ9_CAUCR/2-58)),(Q89T54_BRAJA/2-58,Q89XC4_BRAJA/2-58)),(Q8EC93_SHEON/9-62,(CHER_VIBAN/7-63,Q8GLP9_AERHY/5-61))))))))),O51613_BORBU/205-262),O58194_PYRHO/3-60),(((((CHER_BACSU/1-56,(Q8EQB5_OCEIH/1-56,CHER_BACHD/1-57)),Q8RA73_THETN/1-56),(CHER_LISIN/5-61,Q81SI4_BACAN/3-59)),CHER_THEMA/25-80),(Q893S7_CLOTE/1-57,Q97GZ4_CLOAB/2-55))),(Q8PX98_METMA/32-88,Q8TUQ2_METAC/110-166)),O29225_ARCFU/1-57),Q8Q013_METMA/5-61,Q8TLH3_METAC/5-61); |
(((((((((((FRZF_MYXXA/5-61:0.93974,(Q98PC8_RHILO/3-54:0.80414,(((Q886T1_PSESM/1-57:0.27648,Q842H1_PSEFL/1-56:0.33828):0.02878,Q88MS8_PSEPK/4-55:0.40312):0.38270,Q9HXT5_PSEAE/1-54:0.33186):0.07585):0.33314):0.44045,((O85748_TREDE/198-250:0.00000,P96124_TREPA/208-260:0.70422):2.47974,Q7X4X5_RHOCE/16-72:0.09807):0.98070):0.30531,((Q7NXP6_CHRVO/266-322:0.68032,((Q88GG4_PSEPK/7-63:0.19557,Q8PBD8_XANCP/7-63:0.57025):0.18900,(((Q7MDV2_VIBVY/10-66:0.45625,Q8F5D9_LEPIN/60-116:0.29834):0.25945,Q8YVX1_ANASP/9-65:0.36612):0.14075,Q81H19_BACCR/18-74:0.55591):0.05249):0.34982):0.78087,((Q7USG5_RHOBA/230-286:0.47235,YH19_RHOCA/176-232:0.86042):0.22293,((Q7UK14_RHOBA/211-267:0.60527,Q8P4M1_XANCP/228-284:0.47201):0.19460,(((Q8TK74_METAC/285-341:0.11108,Q8TPC4_METAC/272-328:0.11836):0.41594,((Q7NFG3_GLOVI/214-270:0.20877,Q8YW99_ANASP/159-215:0.35201):0.13343,Q7NJH8_GLOVI/220-276:0.35990):0.20600):0.17231,Q92W49_RHIME/203-259:0.54505):0.07866):0.11419):0.32723):0.24734):0.00000,(Q7NG43_GLOVI/37-93:1.12387,Q8KLS6_RHOSH/5-61:1.01523):0.55255):0.21471,(((O33557_RHOSH/6-62:0.67159,Q89SQ2_BRAJA/13-69:0.79843):0.47776,((Q51346_PSEAE/16-72:0.98147,((CHER2_VIBCH/7-65:0.50689,Q7X4Y2_RHOCE/31-90:0.54030):0.22646,Q8RAZ1_THETN/2-61:0.21395):0.62946):0.08917,(O51375_BORBU/5-61:0.75789,O83638_TREPA/28-84:0.57123):0.27403):0.21382):0.07828,((Q8F4J9_LEPIN/25-81:0.60349,(((((Q7NSI7_CHRVO/24-80:0.42280,(Q7MBQ3_VIBVY/20-76:0.03702,CHER3_VIBCH/12-68:0.43031):0.44050):0.03808,(Q8P9J5_XANCP/19-75:0.35281,(Q7WAA5_BORPA/19-75:0.35046,Q8XQ81_RALSO/20-76:0.36155):0.08484):0.06195):0.11934,((Q7NRT7_CHRVO/21-77:0.33827,(Q8EF63_SHEON/8-67:0.30918,CHER2_PSEAE/18-74:0.40115):0.32071):0.10241,((Q53129_RHOSH/18-74:0.52173,(O85127_9RHIZ/25-81:0.53253,O87716_CAUCR/23-79:0.21137):0.14248):0.11566,((Q7NV39_CHRVO/9-65:0.35045,(Q888V6_PSESM/8-64:0.50036,Q8P7A7_XANCP/15-71:0.53771):0.25813):0.15796,Q8EEQ2_SHEON/14-70:0.59754):0.12428):0.20026):0.15805):0.05814,(CHER_ECOLI/23-79:0.06378,Q7N5T2_PHOLL/27-83:0.28659):0.28848):0.08566,Q82TM4_NITEU/17-73:0.56617):0.25024):0.06302,((CHER_BORBU/15-71:0.71941,CHER_CAMJE/8-63:0.72343):0.23312,((Q7VIZ7_HELHP/5-61:0.82998,Q7M942_WOLSU/5-62:0.76481):0.29332,(CHER1_PSEAE/4-60:0.32536,(((P72254_RHOCE/2-58:0.41197,(Q9A2T4_CAUCR/2-58:0.42636,Q9AAJ9_CAUCR/2-58:0.63334):0.44010):0.33490,(Q89T54_BRAJA/2-58:0.11263,Q89XC4_BRAJA/2-58:0.22631):0.34794):0.44312,(Q8EC93_SHEON/9-62:0.39890,(CHER_VIBAN/7-63:0.37897,Q8GLP9_AERHY/5-61:0.29726):0.11445):0.19421):0.11551):0.53170):0.12791):0.07112):0.00000):0.21247):0.13828,O51613_BORBU/205-262:2.74895):0.08805,O58194_PYRHO/3-60:0.53853):0.14208,(((((CHER_BACSU/1-56:0.40606,(Q8EQB5_OCEIH/1-56:0.32868,CHER_BACHD/1-57:0.38179):0.08391):0.19409,Q8RA73_THETN/1-56:0.33208):0.14483,(CHER_LISIN/5-61:0.53387,Q81SI4_BACAN/3-59:0.71674):0.17007):0.25672,CHER_THEMA/25-80:0.55902):0.25759,(Q893S7_CLOTE/1-57:0.17734,Q97GZ4_CLOAB/2-55:0.25872):0.40251):0.40242):0.14715,(Q8PX98_METMA/32-88:0.16525,Q8TUQ2_METAC/110-166:0.09758):0.64959):0.12746,O29225_ARCFU/1-57:0.36907):0.44194,Q8Q013_METMA/5-61:0.15617,Q8TLH3_METAC/5-61:0.08577); |
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