pandit
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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
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PF03705 phylogeny for nucleotide alignment |
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(((((((((((Q98PC8_RHILO/3-54,Q9HXT5_PSEAE/1-54),(Q886T1_PSESM/1-57,(Q88MS8_PSEPK/4-55,Q842H1_PSEFL/1-56))),(Q7X4X5_RHOCE/16-72,FRZF_MYXXA/5-61)),(Q51346_PSEAE/16-72,(O33557_RHOSH/6-62,Q89SQ2_BRAJA/13-69))),(((Q7X4Y2_RHOCE/31-90,((Q8RAZ1_THETN/2-61,((O51375_BORBU/5-61,O83638_TREPA/28-84),(((((Q8Q013_METMA/5-61,Q8TLH3_METAC/5-61),(O58194_PYRHO/3-60,O29225_ARCFU/1-57)),(Q8PX98_METMA/32-88,Q8TUQ2_METAC/110-166)),(Q8F4J9_LEPIN/25-81,(Q8EEQ2_SHEON/14-70,(Q7VIZ7_HELHP/5-61,(Q7MBQ3_VIBVY/20-76,CHER3_VIBCH/12-68))))),(O51613_BORBU/205-262,(CHER_CAMJE/8-63,(CHER_BORBU/15-71,((((Q8EQB5_OCEIH/1-56,(CHER_LISIN/5-61,CHER_BACHD/1-57)),CHER_BACSU/1-56),Q8RA73_THETN/1-56),((Q81SI4_BACAN/3-59,CHER_THEMA/25-80),(Q893S7_CLOTE/1-57,Q97GZ4_CLOAB/2-55))))))))),CHER2_VIBCH/7-65)),(Q7M942_WOLSU/5-62,(((Q7NRT7_CHRVO/21-77,Q8P9J5_XANCP/19-75),Q7NSI7_CHRVO/24-80),(((CHER_ECOLI/23-79,Q7N5T2_PHOLL/27-83),(Q7WAA5_BORPA/19-75,Q8XQ81_RALSO/20-76)),(((Q8EF63_SHEON/8-67,CHER2_PSEAE/18-74),((Q7NV39_CHRVO/9-65,(Q888V6_PSESM/8-64,Q8P7A7_XANCP/15-71)),((Q53129_RHOSH/18-74,O85127_9RHIZ/25-81),O87716_CAUCR/23-79))),Q82TM4_NITEU/17-73))))),(((P72254_RHOCE/2-58,(Q89T54_BRAJA/2-58,Q89XC4_BRAJA/2-58)),(Q9A2T4_CAUCR/2-58,Q9AAJ9_CAUCR/2-58)),((Q7NG43_GLOVI/37-93,Q8KLS6_RHOSH/5-61),(CHER1_PSEAE/4-60,((Q8EC93_SHEON/9-62,CHER_VIBAN/7-63),Q8GLP9_AERHY/5-61)))))),(Q8P4M1_XANCP/228-284,(Q7UK14_RHOBA/211-267,YH19_RHOCA/176-232))),((O85748_TREDE/198-250,P96124_TREPA/208-260),((Q8PBD8_XANCP/7-63,(Q88GG4_PSEPK/7-63,(Q7MDV2_VIBVY/10-66,((Q8F5D9_LEPIN/60-116,Q81H19_BACCR/18-74),Q8YVX1_ANASP/9-65)))),Q7NXP6_CHRVO/266-322))),Q7USG5_RHOBA/230-286),((Q8YW99_ANASP/159-215,Q7NJH8_GLOVI/220-276),Q7NFG3_GLOVI/214-270)),Q92W49_RHIME/203-259),Q8TK74_METAC/285-341,Q8TPC4_METAC/272-328); |
(((((((((((Q98PC8_RHILO/3-54:0.72752,Q9HXT5_PSEAE/1-54:0.23882):0.01819,(Q886T1_PSESM/1-57:0.22739,(Q88MS8_PSEPK/4-55:0.32123,Q842H1_PSEFL/1-56:0.18907):0.10154):0.11277):0.21269,(Q7X4X5_RHOCE/16-72:0.49075,FRZF_MYXXA/5-61:0.42032):0.14151):0.13245,(Q51346_PSEAE/16-72:0.51197,(O33557_RHOSH/6-62:0.51094,Q89SQ2_BRAJA/13-69:0.41345):0.04263):0.08995):0.11290,(((Q7X4Y2_RHOCE/31-90:0.23102,((Q8RAZ1_THETN/2-61:0.13861,((O51375_BORBU/5-61:0.32339,O83638_TREPA/28-84:0.75457):0.19207,(((((Q8Q013_METMA/5-61:0.23651,Q8TLH3_METAC/5-61:0.00955):0.16525,(O58194_PYRHO/3-60:0.48186,O29225_ARCFU/1-57:0.37966):0.08537):0.33195,(Q8PX98_METMA/32-88:0.12380,Q8TUQ2_METAC/110-166:0.12686):0.30324):0.19999,(Q8F4J9_LEPIN/25-81:0.48092,(Q8EEQ2_SHEON/14-70:0.46525,(Q7VIZ7_HELHP/5-61:0.61427,(Q7MBQ3_VIBVY/20-76:0.20481,CHER3_VIBCH/12-68:0.20443):0.23222):0.10230):0.00000):0.09550):0.05610,(O51613_BORBU/205-262:0.63514,(CHER_CAMJE/8-63:0.47988,(CHER_BORBU/15-71:0.28682,((((Q8EQB5_OCEIH/1-56:0.30285,(CHER_LISIN/5-61:0.33545,CHER_BACHD/1-57:0.33486):0.15143):0.06556,CHER_BACSU/1-56:0.43678):0.03364,Q8RA73_THETN/1-56:0.32193):0.17879,((Q81SI4_BACAN/3-59:0.46217,CHER_THEMA/25-80:0.52352):0.14064,(Q893S7_CLOTE/1-57:0.11647,Q97GZ4_CLOAB/2-55:0.29793):0.29392):0.06694):0.11144):0.07423):0.11584):0.02469):0.04786):0.28069):0.22684,CHER2_VIBCH/7-65:0.25977):0.38299):0.27247,(Q7M942_WOLSU/5-62:0.99138,(((Q7NRT7_CHRVO/21-77:0.30220,Q8P9J5_XANCP/19-75:0.21142):0.04380,Q7NSI7_CHRVO/24-80:0.29213):0.06406,(((CHER_ECOLI/23-79:0.13129,Q7N5T2_PHOLL/27-83:0.26490):0.27229,(Q7WAA5_BORPA/19-75:0.13794,Q8XQ81_RALSO/20-76:0.30380):0.04084):0.05276,(((Q8EF63_SHEON/8-67:0.57483,CHER2_PSEAE/18-74:0.15709):0.05294,((Q7NV39_CHRVO/9-65:0.31686,(Q888V6_PSESM/8-64:0.38229,Q8P7A7_XANCP/15-71:0.34975):0.08204):0.11969,((Q53129_RHOSH/18-74:0.28603,O85127_9RHIZ/25-81:0.40530):0.13455,O87716_CAUCR/23-79:0.20207):0.07465):0.12184):0.12099,Q82TM4_NITEU/17-73:0.47874):0.03427):0.02055):0.00172):0.04536):0.05255,(((P72254_RHOCE/2-58:0.32109,(Q89T54_BRAJA/2-58:0.06541,Q89XC4_BRAJA/2-58:0.22481):0.26026):0.05534,(Q9A2T4_CAUCR/2-58:0.35915,Q9AAJ9_CAUCR/2-58:0.31209):0.19495):0.05438,((Q7NG43_GLOVI/37-93:0.77272,Q8KLS6_RHOSH/5-61:0.27623):0.31720,(CHER1_PSEAE/4-60:0.23466,((Q8EC93_SHEON/9-62:0.31715,CHER_VIBAN/7-63:0.44446):0.16192,Q8GLP9_AERHY/5-61:0.21378):0.28989):0.09939):0.13465):0.15832):0.06904):0.21199,(Q8P4M1_XANCP/228-284:0.29959,(Q7UK14_RHOBA/211-267:0.50256,YH19_RHOCA/176-232:0.33257):0.07192):0.05023):0.05589,((O85748_TREDE/198-250:0.66910,P96124_TREPA/208-260:0.00000):1.17057,((Q8PBD8_XANCP/7-63:0.23096,(Q88GG4_PSEPK/7-63:0.18912,(Q7MDV2_VIBVY/10-66:0.49041,((Q8F5D9_LEPIN/60-116:0.37217,Q81H19_BACCR/18-74:0.46004):0.11559,Q8YVX1_ANASP/9-65:0.28007):0.09215):0.20647):0.13718):0.18983,Q7NXP6_CHRVO/266-322:0.31942):0.06127):0.21997):0.06035,Q7USG5_RHOBA/230-286:0.57532):0.03028,((Q8YW99_ANASP/159-215:0.39399,Q7NJH8_GLOVI/220-276:0.25307):0.04815,Q7NFG3_GLOVI/214-270:0.12069):0.18751):0.14765,Q92W49_RHIME/203-259:0.38960):0.30683,Q8TK74_METAC/285-341:0.13309,Q8TPC4_METAC/272-328:0.07255); |
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