EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03653 - UPF0093)
Uncharacterised protein family (UPF0093)
(Pfam reference: accession no. PF03653)
(Interpro reference: accession no. IPR005265)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 153 aa
(ave. pairwise identity: 0.40)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.34)
nucleotides
(available for above)
4 sequences @ 459 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 109.70)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 153 aa
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 2.34)