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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03636 alignment
(14 sequences with 347 aa)


Q98PT5_MYCPU/12-257 KIYQKGYDPLL-SGK.TESIFAQGNGYLGIR--------AV.----DEEN--SH-------------FHKEDFF--INGLF-------.--N-------.------------RGDENEVSELAN.LSNTIQLKI.LIDGRV-FETS--.--HVSSYYKELDLKNGKLKRILRYKQKD-KF-FELIFERLVDQENKQLYAQKITIK------QLKGLESEIKIFPLIDGQSTNRG--IQHFKEGKKLL------------ISDALIQYQEQT--NQSN--.---FWAIHNMKIKVFENKKLLECDNDNFVIKMARRQIGYEIKSKVSIGKDFVLE-KIMSVNSlTKDV
YCJT_ECOLI/6-241 TLSEPHFSQHT-LNK.YASLMAQGNGYLGLR--------AS.----HEEDYTRQ---------------TRGMY--LAGLY-------.--H-------.-----------RAGKGE-INELVN.LPDVVGMEI.AINGEV-FSLSH-.----EAWQRELDFASGELRRNVVWRTSNGSG-YTIASRRFVSADQLPLIALEITIT------PLDADA-SVLISTGIDATQTNHG--------------RQHLDETQVRVFGQHLMQGSYTT--QDGR--.---SDVAISCCCKVSGDVQQCY--------TAKERRLLQHTSAQLHAGETMTLQ-KLVWIDW.RDDR
Q9RJM8_STRCO/7-260 TWDYDHYDAAE-ERL.RESLCTLGNGYFATR--------GA.----LPECAADD-------------VHYPGTY--VAGCY-------.--NRLIST--.-------VA----GREVENEDMVN.LPNWLPLRF.RPAGGDWLTPDT-.-AEVLDHRQTVHLDSGVLERLTRFGLDGERV-LSVRQLRLVHMADPHLAALRTEFT------A-EGGPVDLEVEAALDGGVTNSG------VPRYRDLDGHHLTHVHTGTAGDDTVWLRCRT--RTSD--.---IRTGMAARTTADAPVT----------AAREHLCVTQRVTLRARPGRTATVD-KVVALHT.SRDP
Y2006_MYCTU/536-795 TLVFHGYDPGQ-ERL.REALCAVGNGYLGSR--------GC.----APESAESE-------------AHYPGTY--VAGVY-------.--NQLTDH--.-------I----EGCTVDNESLVN.LPNWLSLTF.RIDGGAWFNVDT-.-VELLSYRQTFDLRRATLTRSLRFRDAGGRV-TTMTQERFASMNRPNLVALQTRIE------S-ENWSGTVDFRSLVDGGVHNTL--VD---RYRQLSSQHLTTA-EIEVLADS-VLLRTQT--SQSG--.---IAIAVAARSTLWRDGQRVD---AQYRVARDTNRGGHDIQVTLSAGQSVTLE-KVATIFT.SRDA
TREPP_LACLA/6-253 IIQYDKKEVGK-RSYgQESLMSLGNGYLGLR--------GA.--PLWSTC--SD-------------NHYPGLY--VAGVF-------.--NRTSTE--.-------VA----GHDVINEDMVN.WPNPQLIKV.YIDGEL-VDFEA-.--SVEK-QATIDFKNALQIERYQVK-LA-KGNLTLVTTKFVDPINFHDFGFVGEII------A-DFSC-KLRIETFTDGSVLNQN------VERYRAFDS-----KEFEVTKISKGLLVAKT--RTSE--.---IELAIASKS--FLNGL-AF---PKID-SENDEILAEAIEIDLQKNQEVQFD-KTIVIAS.SYES
Q9L2I8_STRCO/13-273 RVRETALNLDL-LAQ.SESVFALSNGHVGWR--------GN.----LDEGEP---------------HGLPGSY--LNGVY-------.--ELHPLP--.-------YAEAGYGYPESGQTVIN.VTNGKLLRL.LVDDEP-FDLRY-.-GRLGRHERTLDLRRGVLERTCEWTSPAGTT-VRVRSTRLVSLTQRAIAAVEYEVE------PVDTRT-RVVIQSELVANESLPSSDGDPRAAQALQSPLEP----EEDLAMGSRLRLVHRT--RRSG--.---LRVAVAADHVVDAPGE------ITTSSESNTDVSRLTITSVLDPGQRLRVQ-KTVAHGW.SGAR
Y3401_MYCTU/13-273 QVRETKLNLNL-LAQ.SESLFALSNGHIGLR--------GN.----LDEGEP---------------FGLPGTY--LNSFY-------.--EIRPLP--.-------YAEAGYGYPEAGQTVVD.VTNGKIFRL.LVGDEP-FDVRY-.-GELISHERILDLRAGTLTRRAHWRSPAGKQ-VKVTSTRLVSLAHRSVAAIEYVVE------AIEEFV-RVTVQSEL---VTNEDVPETSADPRVSAILDRPLQAVEHE-RTERGALLMHRT--RASA--.---LMMAAGMEHEVEVPGR------VEITTDARPDLARTTVICGLRPGQKLRIV-KYLAYGW.SSLR
O87772_LACSN/11-262 TITSHELQPAD-KRL.QESMTSLGNEYMGMR--------GM.----FEETYSG--------------DSMQGVY--IGGVW-------.--FPDKTR--.-------VGWWKIGYPEYFGKAIN.ALNFVKAII.QIDGVT-VDLAT-.-VPYTDFEVTLDMQAGVLHRQFTV-----NG-VRVQVDRFISVATKELADLRWSFT------AIDGQTHDVQLTALIDGDVVNED--SNYDEKFWDVLDA--------EVTNDT-AFLMTRT--VPNP--.---FGVPQFTV-AAQQRFVSDL---PAIDVVQEDKQVGNVFAGQVG-AVTQRIE-KRVIVTT.SRDY
Q9K109_NEIMB/12-263 TLRSAKLEKEH-KRL.QESLTSLGNGYMGMR--------GS.----FEETYSA--------------DSHLGTY--IAGVW-------.--FPDKTR--.-------VGWWKNGYPKYFGKAIN.AFNFSKVKI.FVDGQE-VDLAK-.-NDVAGFSVELDMQHGVLRRSFTVF-----G-VRFNVCKFLSVAQKELAVIRWEAV------SVDGKTHQVRIDSIIDADVKNED--SNYEEKFWQVLDK--------GVSDSL-SYIAAQT--VANP--.---FGVEQFIVN-AEQTFAGSF---KALGGSQTDWQVSNSFESEVG-STPETFE-KRVIVTT.SRDY
Q9CF04_LACLA/14-266 KITSNQIEKED-RRL.QESLTSIGNGYMGMR--------GN.----FSETYSG--------------DSHQGTY--IAGVW-------.--FPDKTR--.-------VGWWKNGYPEYFGKAIN.ALNFASVRV.FIDDKE-VDLAA-.-SHVTDFNLSLDMEKGVLTYTYVA-----YG-VRVTAERFFSIAQQELAVFAFMFE------SLDGEIHQIRTASIIDANVRNED--SNYDEKFWTVKNL--------DNTATG-SFIVTET--IPNP--.---FGVEQFTV-AAKQSFTGDF---TRVKQETRESSVLDVYEAKLIENAPLTFI-KNVLVVT.SRDI
YVDK_BACSU/13-265 KIKTNTFNKEH-TRL.LESLTSLANGYMGVR--------GN.----FEEGYSG--------------DSHQGTY--IAGVW-------.--FPDKTR--.-------VGWWKNGYPEYFGKVIN.AMNFMGIGL.YVDGEK-IDLHQ-.-NPIELFEVELNMKEGILRRSAVVRIQD-KT-VRIRSERFLSLAVKELCAIHYEAE------CLTGDA-VITLVPYLDGNVANED--SNYQEQFWQEEAK--------GADSHS-GHLAAKT--IENP--.---FGTPRFTVLAAMANETEGF---VHESFKTTEMYVENRYSYQ----TKASLK-KFVIVTT.SRDF
Q97FP3_CLOAB/11-268 NIVEDNFMEEK-NKI.SESIFSIGNGYMGQR--------GN.----FEEDYSG--------------LTLKGTY--MAGIY-------.--YPDRTR--.-------VGWWKNGYPKYFAKVLN.STNWIGIKV.NVNGKC-FDISR-.-CKIESFKRVLNMREGYLYRQVIATFKDGER-IKLETKRFVSIVSKEIGAIKYSIT------PLNFS-GEISFFPYLDGDVRNAD--ANYGEKFWSEVSK--------GIRKNE-AHLLIKT--KKLD--.---FYLCSCMKYYIVSESKKHK---LRYKEASKEKFVGSKIKLWLKEEEEVSLF-KYVSNVT.SRDF
ATH1_YEAST/132-415 ILGSNLFSKNTYSRQ.----PYVANGYIGSRIPNIGFGYAL.----DTLNFYTDAPGALNNGWPLRNHRFAGAF--VSDFYCLQPKLNsTNFPELDD--.-------VG--------YSTVISS.IPQWTNLQFsLVNDSKWFNPQNVtLDDVTNYSQNLSMKDGIVTTELDW--LN-SQ-IHVKSEIWAHRHIHPLGVVSLEISLNTDHLPSDFDSLDVNIWDILDFNTSHRT-----------VLHS-----TGTDEKNNA-VFMIVQPDNVPSS--.---NCAIYSTCTVKYENSTNPI---NSSESFEEKDVSSNIYNVILTEDQPKIIVHKYVGIM-.STEF
TREA_EMENI/63-338 QWVLTTSSLDQ-GHY.-QSRGSVANGYIGIS--------VSsVGPFFELDLPVA--GDVINGWPL--YSRRQSFATISGFF-------.--DIQAETNGsNFPWMNQYG---------GESVISgVPHWSGLIL.DLGDDDYLDSTVD.NVTLSDFKSSYDFKAGVLSWSYTWTPAGDKGSYAITYRLFANKLNVNQAVVDMEIT------P--SQDGHATIVNVLDGYSAVRT---------DFVESQ--------E-DDGA-IYSAVRP--WGIPDVsAYFYANITGSKH-VDLSSRRLI--HGKPYVSANESSIAQAADVNFVANEKVRIT-KFVGAA-.STDA