EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF03628 - PapG_C)
PapG chaperone-binding domain
(
Pfam
reference: accession no.
PF03628
)
(
Interpro
reference: accession no.
IPR005309
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 109 aa
(ave. pairwise identity: 0.60)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.93)
nucleotides
(available for above)
3 sequences @ 327 bp
(ave. pairwise identity: 0.64)
New Hampshire format
(total tree length: 0.76)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 109 aa
(ave. pairwise identity: 0.60)
New Hampshire format
(total tree length: 0.93)