EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03577 - Peptidase_C69)
Peptidase family C69
(Pfam reference: accession no. PF03577)
(Interpro reference: accession no. IPR005322)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
21 sequences @ 519 aa
(ave. pairwise identity: 0.35)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.22)
nucleotides
(available for above)
20 sequences @ 1557 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 8.22)
amino acids, restricted set
(corresp. to available nt seqs)
20 sequences @ 519 aa
(ave. pairwise identity: 0.35)
New Hampshire format
(total tree length: 10.70)