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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03566 alignment
(4 sequences with 689 aa)


Q9YRB2_9VIRU/1-608 MDANVQI------RPARNNPSQGNQGRNNNNKRRRR---RRGLKLPPVVAPITSPG--QMAEPANHANTRVNRG----------------------------RTRVRGLR-QAMMESPMAATSEAWIHDYLDPDGEYKTSLDDGK---IPDGAIPQSTCGQFRGTVGARYPGLNSTTLPLDGGTWPLLVMHLPFFRHPLLFITTTSNTEVEVTNADLDAFANDWNNRT-DWTEATYPS-WAQVGN---VFYMVVPTEALTDVPPPTQLGVSGLLESYRLTSSGVTAYFNAPTLVNQGVAVIAQFQ--PDKEHQ--KEN-----------PDIVAGTTQTGGTLQLGGSGPNYT---LTMTIG--DQVEFGGAAIPLPTVS-MGPMPESGQLVFQTANLTFDVGNTI-TITTTLPPGS-------VTGMWQFTASNGTDTVTVDAGARLYAFGA---NLDASELNLQDINSIKIPPTNMNQMMQATPKTIQFQLNETKG-FYMPLRAFQPVFEMTMATSYGPVRWKTPRTTVVDYHRAIGGLQDTIDSNFAIGVAAMTGMSTSTVPYFKVFRRFEAIPAEGSPWGPFASATPPKDDVALTVARTWTDLHPFAYPERYNGFGALFAMVAKTIAQIPRYVRSAAGVANAVTDCIESATESVASNSTSERRQRRARRVGGIARGARNLVGRIG
Q9YK87_9VIRU/108-757 GSSNLKDKS--MPFRPRSRRLRGPRPQNLGVRAEGRGSLLTCGDVEENPGPTTVAGLVQEAVGGLNKATKTAPGKRTRRRRRNGKGRIGNPNQPFSISAGAPMSKIPALRGTLAMTEPISPSSVGWLETNLDPCGEYKSTLDYGK---VPDGAIPMSVCGQFRETFTIRHPGANPMLAPLDGSMWTLGIIRTNLWRTPFLLIADMNNAEISDE--SLDEVARSFNNYVGDLADASHPN-WVETSQAG-LYWSIQRWTALIGVPPPSDTGVSPYITDFRITGSGFTVSSNTPSLINQGMVVVAQFN--PNTENK---EV--------I--PHSESGETPLGWSRLYSVTASTVAITYIQPGVG-GAQNQRTVTLNRSGSVINSSVLPQVTQGYRFNNGDTYAVGDTLRFQLTERDSGGYTVRLQRSADGTTFTNIGPLSTTTGQNGGFNTDSGLG--VLLEGDVLAGRVNMLTLPPFTQSDLMQQTPKTCVFQIKE--GGFYVRQDIWQPVYNMTPASRYAPVRFVSNAITLDALNSAVGTIRDTADSNYGFALCHMTSLPLACAPFIKAEMRFEAVPGRNSPWGPFATSTPPKDEVALTISRTVMDLEPFAMPLAYNGWGLMFSKVLSIVRRIPKALRTASNVAETVAGCVEDAQAGVTKVYET---------VRGR-RGAMRDMTLQQ
Q82462_9VIRU/2-647 GDAGVASQRPHNRRGTRNVRVSANTVTVNGRRNQRR---RTGR-QVSPPDNFTAAA--QDLAQSLDANTVTFPAN---------------------------ISSMPEFRNWAKGKIDLDSDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVKFSVDAEIREIYNEECPVVTDVSVPLDGRQWSLSIFSFPMFRTAYVAVANVENKEMSLD--VVNDLIEWLNNLA-DWRYVVDSEQWINFTNDTTYYVRIRVLRPTYDVPDPTEGLVR-TVSDYRLTYKAITCEANMPTLVDQGFWIGGQYALTPTSLPQYDVSEAYALHTLTFARPSSAAALAFVWAGLPQGGTAPAGTPAWEQASSGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAG-DTVTFRQVAVDEV---VVTNNPAGGGSAPTFTVRVPPSN-AYTNTV-FRNTLLETRPSSRRLELPMPPADFGQTVANNPKIEQSLLKETLGCYLVHSKMRNPVFQLTPASSFGAVSFNNPGYERTRDLPDYTGIRDSFDQNMSTAVAHFRSLSHSCSIVTKTYQGWEGVTNVNTPFGQFAHAGLLKNEEILCLADDLATRLTGVYPATDNFAAAVSAFAANMLSSVLKSEATSSIIKSVGETAVGAAQSGLAKLPGLLMSVPGKIAARVRARRARRRAARAN
Q90063_9VIRU/1-642 MDSNSAS----GKRRSRNVRIAANTVNVAPKQRQARG--RRARSRANNIDNVTAAA--QELGQSLDANVITFPTN---------------------------VATMPEFRSWARGKLDIDQDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVKFSVDAEIREIYNEECPTVSDASIPLDGAQWSLSIISYPMFRTAYFAVANVDNKEISLD--VTNDLIVWLNNLA-SWRDVVDSGQWFTFSDDPTWFVRIRVLHPTYDLPDPTEGLLR-TCSDYRLTYKSITCEANMPTLVDQGFWIGGHYALTPIATTQNAVEGSGFEHPFNVTRPGIAAGVTLTWASMPPGGSAPSGDPAWIPDSTT-QFQWRHGGFDAPTGVITYTIPRGYTMQYFDTTTNEWNGFANPD-DVVTFGQTGG------AAGTNATITITAPTVTLTILATTTSAANVINFRNLDAETTAASNRSEVPLPPLTFGQTAPNNPKIEQTLVKDTLGSYLVHSKMRNPVFQLTPASSFGAISFTNPGFDRNLDLPGFGGIRDSLDVNMSTAVCHFRSLSKSCSIVTKTYQGWEGVTNVNTPFGQFAHSGLLKNDEILCLADDLATRLTGVYGATDNFAAAVLAFAANMLTSVLKSEATTSVIKELGNQATGLANQGLARLPGLLASIPGKIAARVRARRDRRRAARMN