EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03561 alignment
(13 sequences with 579 bp)


Q9I3J8_PSEAE/20-164 GGCAGCCAGGTGGTCGCCGTCAGCGACGAATGGTTCGCCCCGGCCAGCCGCATGCTGCAGGCCGGCGAACCGGTGTGGAAGGAAGGCGTATTCGACGACAGCGGCAAGTGGATGGACGGCTGGGAAACCCGCCGCAAGCGCTTC------...............------------------------GAGGGCCAT---GACCAGGCGGTGATCCGCCTGGGTGTGCCG---GGCGTGCTGAAGGGCGTCGACATCGACACCCGCTTCTTCACCGGCAACCATCCGCCGGCGGCTTCCCTGGATGGCTGCTTCTGCGCCGAAGGCGAC---------------......------------------------------------------------------CCGGACGACAGCACGTCCTGGAGCGAAGTGCTGGCGGCGGTGGGGCTGCAG---------GGCGATAGCCATCACTACCACCCG---------ATAGACGACGAACGTCCCTGGACCCACCTGCGCCTGAACATCTACCCGGACGGAGGTATCGCCCGCCTGCGCCTCTATGGC
ALC_XENLA/28-199 GGGGGGAAGGTGTTGTTCGCTACTGATGACTGGTTTGCTCCTGCAGAACATTTATTAAAGAAAACTGAACCAGAATTCAAAGTGGGATTGTTCACAGAGTTTGGAAAATGGATGGATGGCTGGGAGACAAGAAGGAAACGCATC------...............------------------------CCAGGTCAT---GACTGGTGCATAATTCAACTGGGCGTGCCA---GGGATCATTCATGGCTTTGAAGCTGACACTCGCTTTTTCACAGGAAACTATGCCCCTCGCATCTCAATTCAGGCAGCGTGTTTGAAGCCAGAGGAAATTACATTGCAACCA......AGAGAAGACAAAATTGGCACCGCTGCTTCTGATGAAGAATTTAAAGCAGCTGATAAGCTTAAGTCAGAGAAGTGGAGTCATCTGCTTAAAATGACTGAGCTCAAACCTGGGTACGCTGAATCAAGTCACAGCTAC------TTTCAAGTAAACTCAAAGGAGAGATGGACACATTTACGACTTAACATCTATCCAGATGGTGGAATAGCCCGTTTTAAAGTCTATGGC
Q9JHX6_MOUSE/28-201 GGAGGAAAGGTTTTGTTTGCGACGGATGACTTTTTCGGTCCTGCAGAGAATCTCATAAAGAGCGACAGTCCAACTTTTAAGGAACATGAATACACTGAGTTTGGCAAATGGGTGGATGGATGGGAGACCAGACGTAAGCGAATT------...............------------------------CCAGGTCAT---GACTGGTGTGTCATCCAACTGGGGATACAG---GGCATTATTCGTGGTATCGACGTGGACATTTCTTACTTCTCAGGGAACCATGCTCCTCGCATGTCAATCCAAGCAGCGAACCTGAGTGAAGAAGATACAATGTCAAACATCccaccaAGGGGAGTTAGGATGGGAACTGCAGCGACGCCTGAGGAGTTTGAAGCCGTTACTGAGCTGAAATCACACTCCTGGGATTACCTGGTTCCCATGTCGGAGCTTAAGCTAGGGGACCCTGACTCCAGCCACAACTATTATTTT------GTTAATTCCCAGCAGAGATGGACTCATATAAGACTCAACATCTTCCCAGATGGTGGTGTTGCACGCCTTCGAGTATACGGC
ALC_STRCO/47-206 GGCGCGGGTGTCGTCGCCGCCAACGACGAGTTCTTCGCCCAGCGCGAGAACCTGCTGGTGCCCGAGCCCGCCGAGTTCGACCCCGAGCACTTCGGGCACAAGGGCAAGGTCATGGACGGCTGGGAGACCCGCCGGCGCCGCGGCGTCTCG...............GCCGAGCAGCCCTGGCCCACCGAGGAGGACCAC---GACTGGGCGCTGATCCGCCTCGGCGCCCCC---GGCGTGATCCGCGGCATCGTCGTCGACACCGCCCACTTCCGCGGCAACTACCCGCAGGCCGTCTCCGTCGAGGGCGCCTCGGTCGCGGGCTCCCCCTCCCCGGAGGAACTG......------------------------------------------------------CTCGCGGACGACGTGAAGTGGACGACCCTCGTCCCGCGCACCCCGGTCGGC---------GGCCACGCGGCCAACGGCTTCGCC---------GTCTCGGCCGAGCAGCGCTTCACCCACCTGCGCCTCAAGCAGCACCCAGACGGCGGCATCGCCCGCCTGCGGGTGTACGGC
ALC_SCHPO/31-178 GGTGGTCAGGTGCTTGGGTGTAGCGATGATTTCTTTGCATCTTGCGAAAACCTCATCAATCCTGCGGACCCTATTCGCAAAGCCGGTGTATTCGTTGAAACGGGTGCCTGGTATGATGGATGGGAGACGCGTAGACACAATACC------...............------------------------GCTCCTTGT---GACTGGGTTATAGTTAAGTTAGGGCCTTCAAGTGGAAGGGTTACTGGCTGTGAAATTGATACTACCTTTTTTAACGGCAATCATGCTCCAGAAGTGAGTGTGGAAGCTGCTTTTTTACCGGAAGGTAAC---------------......------------------------------------------------------CCCGACGCCAAAACAAATTGGACCCCTATACTTCCTAAGCTTCCTTGTGGA---------CCCACTCAGAGACATATCTATCGCTTTAAGGAGATA---CCACAGCAAAATTTTACCCATGTTCGTTTATGTATGTATCCTGACGGCGGTATAGCTCGATTCCGTCTTTATGGC
ALC_YEAST/31-182 GGTGGTCAAGTGGTTTCTTTTTCAGATGAATGGTTTGCTTCTGCTGAAAATTTAATTCAGCCAACTGCTCCTATAAGGGATCCTACCAGATTTGTTCATTCAGGCGCATGGTACGACGGCTGGGAAACACGAAGACATAATGAG------...............------------------------ATGGAATAC---GATTGGGTTATCATCAAGATGGGAGTCGCTGCTGCCCATATTATTGGTGGTGAAATTGACACTGCGTTTTTCAATGGTAATCATGCACCATTTGTATCAATAGAGGCGCTCTATGACGAGGGCGAAGAA---------------......---------------GGTAATATA------------------------------GTGGAAGATGACTCGCGTTGGGTTGAGATTGTTGAGAAATTTGAGTGTGGT---------CCTTCGCAAAGGCATCTTTTCGTTAGAGGCAACGGCCTTACTAAAGAAAGGTTTACTCACATCAAGCTGAAGATGTACCCCGATGGAGGAATCGCCAGATTTAGATTATACGGA
ALC_NEUCR/38-190 GGTGGCAAGGTTCTCGGTTTCTCGGACGAATGGTTCGCCGAAGCAGCCAACCTCCTCACTCCTACAGCCCCAATCCGCCAGCCGGGAAAGATGGTTTACACCGGCGCCTGGTATGACGGATGGGAGACAAGGAGACACAACCCT------...............------------------------GCCGAGTTC---GACTGGGTTGTGATCCGTCTGGGCGTCGCCTCGGGTACCGTCGAGGGTGTCGAGATTGACACGGCTTTCTTCAACGGCAACCATGCGCCCGCCATCTCGGTCGAGGGTTGCTTCAGCCAAAACGACGATGAGGTTCTGTCATGG......------------------------------------------------------AAGGGCGAGCGTGGTGGATGGGAGACTATTCTTGGCGTTCAAGAGTGCGGC---------CCTTCGCAGAGATTCGGCTGGAAACTCGAGAAC---CCTACCAAGAAGCAGTACACCCATGTGCGACTAAACATGTACCCCGACGGCGGCATTGCCAGGTTCCGTCTGTTTGGA
Q9I3J8_PSEAE/187-327 GGCGGCCGGGCGCTGGCCTGCTCCGACCAGCATTTCGGACGCATGGGCAACCTGCTCAACCCCGGACGTGCCATC------------------------------AACATGGGCGACGGCTGGGAAACCGGCCGCCGCCGCACG------...............------------------------CCGGGCCAC---GACTGGGTGATCGTCGCCCTCGGCCATCCC---GGCAGCATCGAGGCGGCGGTCGTCGATACCTTGCACTTCAAGGGCAACTATCCGGAAAGCTGCAGCATCCAGGCCGCCTTCGTGGAAGGCGGGAACGAGGCCCGGATC---......------------------------------------------------------GAGGCGCAGAGCCTCTTCTGGCGCGAGCTGCTGCCAGCGCAGAAGCTGGAA---------ATGCACCAGGAACATCGGTTCGAGCGG---CACCTCAACGCCCTCGGCCCGATCACCCATGTACGCCTGAACATCTTTCCCGACGGCGGCGTCAGCCGCCTGCGCCTGTTCGGC
ALC_SCHPO/200-337 GGTGGACTGGTTGTTCAATGTAGTGATCAACATTTTGGTAAGAAGGACAATCTCCTCCTTCCTGGACGTGGTGTG------------------------------AACATGGGCGATGGTTGGGAAACTGCTAGAAGTAGGGAA------...............------------------------AAGGGTCATGTTGACTGGGTTATTGTAAAGCTTGGCGCAAGA---GGCTACATTGATGATGCTCTTATCGACACTAACCACTTTAAAGGCAATTATCCTAAAGAGGTCATCTTAGAAGCCATTGATTCTCCTGACCACATT---------------......------------------------------------------------------CCTGGCCCCGATGCCCAGTGGGTTACGATTTTACCAGCTCGTAAGCTCGGT---------CCCCATATGGAACATGTCTTCACCAATCTTCAA---AATAACTCAACCCCGATGACCCATGTGCGTATGATAATTATCCCCGATGGCGGCGTCAAGCGTCTTCGTATTTACGGA
ALC_NEUCR/212-350 GGCGGAGTTGCGATCTCCTGCAGTGACCAGCACTTTGGTACCAAGGACAACCTTATCCTTCCGGGCCGCGGCAAG------------------------------GACATGGGCGACGGTTGGGAGACAGCACGCTCGCGCACC------...............------------------------AAGGGCCACGTCGACTGGACCATCATCAGACTCGGCGCGCCC---GGCTACATTCAGAATTTCATGGTCGACACGGCTCACTTCCGCGGTAACTACCCCCAGCAGGTCAAGCTGCAAGCTATCGAGTGGAAGAGCGAGGGCGAGCCG---------......------------------------------------------------------GGAGCGGATTCTGAGGGCTGGACAGAGGTTGTTGAGCCCATCAAGTGCGGT---------CCCGATCAGGAACACCCTGTCGAGAGC------TTGGTGAAGGACAAGCCGTTCACCCACGTCAAGCTCATCATTGTGCCTGACGGCGGAGTGAAAAGACTGCGGGTGTTTGCG
ALC_YEAST/204-342 GGTGCTGTCGCTTTAAAGTATTCTGACCAACACTTCGGTTCAGTTGATAATTTGCTACTGCCAGGTCGAGGTCAT------------------------------GATATGTCGGACGGCTGGGAAACCAAAAGATCGAGACAA------...............------------------------CCAGGTCATACTGATTGGGCGGTAATTCAACTGGGCAGGGAGTCTTCTTTCATTGAGAAGATTATTGTTGATACGGCACACTTCAGGGGGAACTTCCCTCAGTTCATTACCGTGGAAGGTTGCTTGAAGGAGTCAGAATCAAGTGAG---------......------------------------------------------------------AACACTGGTGAAGGAACATGGGTAGAGCTAGTTGGTAAGTCAAAGACGGGG---------CCTGACAAAGAACATGTGTATGAA---------ATACGTAAGAGTATAAGAGTCTCCCATGTCAAATTAACGATTATTCCAGATGGAGGAGTGAAAAGAATAAGAGTTTGGGGG
ALC_XENLA/222-383 GGTGGAGTTTGCCTTGGCTTCAGTGATGCTCACTATGGACATCCTAGGAATCTCATAGGCAATGGAAGAGCATGT------------------------------GATATGGGAGATGGATGGGAAACAGCAAGAAGGCTGGACAGGCCAccaattcttaaagctGATAGTAAAGGCATTCTCCAGGTGCCTGGATTT---GAATGGGCTGTTCTTAAACTGGGCCACCCT---GGCTTAGTAACACATATAGAAATAGACACTAATCACTTTAAAGGAAATTCCCCAAACTCCTGCAAAATTGATGCTTGTGCCCTGAAACCTACAGAG---------------......CAAGAGGAAGTAAAGGGGCATGGAAATTTC---------------------------GAGCAAGGTTATAACTGGAAACCACTACTTCCTGTGACTCAGATCCAC---------CCTCATAAGAGACATTTCATGGAAAGCACATCCCTGGCATTACACCAGGTTATAAGTCATGTGAAGATAACGATTGCACCAGACGGAGGTGTCAGCAGAATTCGGCTTTGGGGA
ALC_STRCO/229-357 GGCGGCCAGGTCGAGGACGCCTCCAACCTCTTCTACTCCCCGGCCACCAACACCATCCAGCCGGGCCGCTCCCGC------------------------------AAGATGGACGACGGCTGGGAGACCCGCCGCCGCCGCGAC------...............------------------------AAGGGCAAC---GACTGGATCCAGTACCGCCTGGTGGACCGC---TCGCAGATCCGCGCGATCGAGATCGACACGGCGTACCTGAAGGGCAACAGCGCCGGCTGGGCCTCCGTCTCCGTCAAGGAC------------------------------......---------------------------------------------------------GGCGAGGCGGGCGAGTGGCGCGAGGTGCTCCCGCGCACCCGGATGCAG---------CCCGACACCAACCACCGCTTCGTC---------CTGCCGGAGGCGGCCGTCGGCACCCACGCGCGCGTGGACATCTTCCCCGACGGCGGCATCTCCCGGCTGCGCCTGTTCGGC