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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF03550 alignment |
| Q74FZ5_GEOSL/36-200 | TL---AATVSLSVK.--.-TPDGSTGGNGYLLYRRPDRFHMVMLTPFGTTALEFFA.aGERITILLPSKGQAYVGTFADLPAKgGLQGWR-----MMQWVvegsplyrpeaAGRTEEQSDDGGVTLATYGPDGLLERKRSARG-EVIYRNY-----RSLEGVPFPALVEFS....DSHG........VRVKITFDEP |
| Q6F8J1_ACIAD/39-193 | QPNEFDLQGKIGVR.--.-TPQQSGSAFFTWSQH-QDDFDIELSGILGVGKTQIEG..KPGEVTLNSAKTGLITASSPEELLK.RATGWDAPITHIVSWV...........QAKPAT--LLAKTMQDDQGRIKDIQE----DGWNVNL--------SYNAQQTLPNKLILKqslaDNQE........NRITMIIQNR |
| LOLB_PSEAE/45-198 | ELDAWQIDGKVGIR.--.-APRDSGSGTLFWLQR-QGYYDIRLSGPLGRGAARLTG..REGAVSLEVAGQGRYQAESPEALLE.EQLGWRLPVSHLLWWV...........RGLPAPD-SKSRLTLDADSRLARLEQ----DGWQIEYTRY-----AEQNGYWLPERLKLH....-GQD........LDVTLVIKDW |
| LOLB_BORPE/40-199 | GEDVFSRVGRFAITvTEsDGKQQAVQGGFAWRDD-GGSYLLDLTNPLGSTEARVEG..RPGMAVLTRANGERLAAEHPDALAE.DALGSPVPVTGLRDWL...........RGRLMAGAAPDGLERDAQGRPTAFEQ----DGWNARLSRY---------DAQGPQLLVLQ....-RQEpgrr....ILVRLVITQP |
| LOLB_RALSO/41-209 | DATITRYQGRFSAR.YVqDDAQQSAVGSFLWRER-GADVQLELMSPLGQTLAIVSQ..NRQGATLELPNQPPRRAAEVDTLMQ.DALGFSLPVSGLRDWL...........RARPTPG-TPARVARDAQSRPETIEQ----NGWTVHYVAWSDDGDNSTANARV-RRLDLD....-RPQgaggapgpLSVRLVLDQ- |
| LOLB_XYLFT/57-213 | EHPNWSFYGRAAIR.--.-QGSDGGSVRVEWEQH-GRGYRIVLSAPMSRQSWVLSG.sSSGPARLEGVGGWVRVGEVAEQVLF.EATGWQVPMGLLPDWV...........RGRNSDS-GGGDVQLDAEGRPHRVYQ----GGWQLRFLDWF---PSSVGRPMLPRQIEAS....-RGS........ARIRLIVDQW |
| LOLB_XANCP/56-214 | AHPAWSFQGRVAIS.--.-KGRDGGSGRLDWQQD-GPRYHVQLSAPVTRQSWVLTGdtTTGAGRLEGLDGGPRAGADAEQVLL.EATGWTIPVNQMPDWV...........RALRIADAGAARVDLDEHGRPRTVQQ----DGWTIDFLEWT---PASAAQPELPRRIEAR....-NGD........AKVRLLVDQW |
| LOLB_NEIMA/32-176 | HTRSFTAEGRLAVK.--.-AEGKGSYANFDWTYQ-PPVETININTPLGSTLGQLCQ..DRDGALAVDGKGNVYQAESAEELSR.QLVGFKLPIQYLHIWA...........DGRPVAG-APYRILPDG-----ILEQ----YGWTVG---------RTADSGGQVRTLQLN....-NGN........LNIRLVFTEI |
| LOLB_CHRVO/33-179 | ADAPFSVSGRLSAN.--.-LDGKGHVANFDWRHL-PPRDEVAINSPLGNTVAKVLR..DPGGVTLL-ADGKRWQADDVESLTR.QVMGWPLPLSNLVWWI...........RGLPAPG-VESRVDADGN-----LEQ----QGWHIRFIR------DADVDSDHPKRVEMQ....-REG........LTVKVVVQSW |
| LOLB_COXBU/57-209 | RISQWNIDGAFSIQ.--.-QPGKTIIAAYDWQQK-GMNYRIRIHSSLDIYSVNISG..RPGMVTLWRSPRQHYTASTPEQLMQ.QQLGWQLPLSNLYYWI...........RGIPAP--GAYQADFDTYTHLIALQQ----SGWHIRFSQY-----TTVGSVDLPRTLQLS....-NGS........LAVKIVVKHW |
| LOLB_NITEU/42-197 | ANEPFVLTGRLAVN.--.-ARQHRFSGGIRWQHT-GQSDEIYLFSPLGQIVAEIFR..DQTGVRLVTSEPAIYRAQNAEYLTS.QVLGWELPLAGMRFWV...........RGTHFPD-TVAEKDLDKNRRTVAIRQ----DGWQVVYQNYY---PAQEGMSVLPRLLEFS....-RPD........VKMRLLVDQW |
| LOLB_SHEON/45-200 | QAKAWELQGKLAIR.--.-TPEDKLSANLYWRHS-EERDELTLTTMLGTTVLTLEA..TPNSAHLHI-DGKDFRDTNAQALLE.RVSGWSIPINDLPLWI...........TGQIGS--LDRVIAVDSAGQAKQLQNMQTPPPWLVTFLSW-----QSQSGAKVPYQLTLE....-RGD........LQLKLQLNQW |
| LOLB_HAEIN/51-207 | KIQSYQAKGQIGYI.--.-SPTERFSSRFEWQYQNPKSYTLKLYSLISKSTLWIQM..HQSGMTISDNNGNQQSAANSKLLLQ.EIIGMDVPLEHLAYWL...........KGQPA---MNADYQVGTNHLLGAFTYHVDGSQWTADYLTY-----HSNNS--MPENILLK....-NDStk......QTLKIRVDEW |
| LOLB_ACTAC/49-205 | QIQGYPALGQLGYI.--.-SSKERFSTRFDWQYNNPRDYTLQLYSTISSETLQIQM..HAQGMTISDNKGRQRSAADAKMLLR.EIIGMDFPLEQFAFWL...........KGQPE---DNADYQVGENHLLATFSRTIDGKPWTADYLSY-----HVNRRPPMPENILLK....-TEG........QTLKIRVDEW |
| LOLB_PASMU/50-205 | KIRDYTNQGQLGYI.--.-SQKERFSTRFDWQYQNPTNYRLTLSSTLSPTTLSIEV..RHNVMHLSDNKGPLRSAQDAKRLLK.EIVGMDLPLDQFALWL...........KGQPD---ESREYRVAENHLLAHFSYPIDNQQWTADYLSY-----HQLPLP-LPKDILLK....-TEG........QTLKIRIDNW |
| LOLB_HAEDU/51-207 | EIKNYEVKGQFGYI.--.-SPTERFSAHFDWQYKTPIDFTLALSSNLSTKLLKLQR..SHQGLTVSDSEGYSRTEADIHALMQ.EIIGVSFPIDQFAYWV...........KGQPA---QEGNYIVNEKRQLSQFSYPINQQIWQARYVEY-----HENRVPYLPKLIVLE....-NGQ........QTLKIRLDHW |
| LOLB_VIBPA/40-199 | TIHDFQATGKLGYI.--.-GPDQRQSLNFFWKHS-TALSQLRLTTVLGQTALKLTI..TPQGATVETYDDQVLSARNANQLIY.RLTGLMMPVDHMPDWL...........LGLPT---DADTFQLSPANTLQTLDKQIGLNDWKIAYERYGDVEWHEQTLP-LPNKLKLT....-TSD........VKINLVITKW |
| LOLB_VIBVY/40-199 | QIQSFQAVGKLGYI.--.-SPDQRQNLNFYWKHS-PEQSNLRFTTFLGQTALNLTM..TPQGARVETYDDQILTAANATALVQ.QLTGLVIPVEQLSDWI...........IGLPN---GADDFQLNEQNTLSSLEKDLNFQRWHIAYTQYRDVEFHQQVVP-LPAKLSLT....-QQD........IKLNIVVSKW |
| LOLB_VIBCH/42-201 | QIQHYQLTGKLGYI.--.-APDQRQSFNFQWQKS-PQKLSLRLSNFLGQTVLNLQV..DEQGARVETYDDQIYRDQDAQSLIR.NLTGLDIPVEQLEDWI...........LGLPT---QATHYELNEQNTLATLTKLASTEEWHVEYQRYQAIEWQHQPIP-LPDKLKLQ....-QNK........TSIQLVISQW |
| Q6LNB2_PHOPR/63-218 | NLSRYDAKGKLGYK.--.-APKLRFGGNMIWQTT-PNSDKLLLTNFLGKTLLKLDA..TPKMTTLVDYDGKQHSGANASELVR.ELTGINLPIEQMRDWL...........IGLPT---AADTYQLNPQNRVAYLAKQVDGQIWEMDYQEY-----DYSIYPSLPKRMVLT....-QDK........QQITLIINEW |
| LOLB_PHOLL/49-205 | QLNQYQTRGSFAYL.--.-SNEKKVYARFFWQQYHPERYRLLLTNPLGSTELELIV..QPNMTQLTDSQGKKYFSDNPEEIIY.QFTNMDIPLDNLRHWI...........TGLPG---DAKNFKLDANYLLKTVNYQQNGATWQVNYQSY-----DTSTTPALPNRLELI....-QGD........RRIKLKMDNW |
| LOLB_YERPE/48-204 | QLGQFETRGAFAYL.--.-SDKQKVYARFFWQQTSPERYRLLLTNPLGSTELELVV..QPGVTQLTDNQGKRYVSDDPQEMIQ.KLTGMSIPLESLRQWI...........LGLPG---DTSDFTLDDKYRLKKLTYQQNGVTWVVDYQEY-----NTQVTPSLPSRLELN....-QDG........QRIKLKMDSW |
| Q6D553_ERWCT/48-204 | QLTQYQTRGAFAYI.--.-SDSKRVSANFFWQDTPPQRYRLLLTNPLGSTELELRA..QPDGVQITDNQGKRYVGKDAEYMIQ.QLTGMAIPLNNLRQWI...........LGIPG---DATEFTLDERYLLKTITYRQGNQNWDVSYQSY-----NTELTPPLPTSLELV....-QGE........QRIKLKMNNW |
| LOLB_SALTI/48-204 | HLNQYQTRGAFAYI.--.-SDDQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNA..QPGNVQLVDNKGQRYTADDAEEMIG.KLTGMPIPLNSLRQWI...........LGLPG---DATDYKLDDQYRLSEVNYHQDGKNWKVVYGGY-----DSKTQPAMPANMELS....-DGS........QRIKLKMDNW |