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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03539 - Spuma_A9PTase)
Spumavirus aspartic protease (A9)
(Pfam reference: accession no. PF03539)
(Interpro reference: accession no. IPR001641)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 163 aa
(ave. pairwise identity: 0.59)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.57)
nucleotides
(available for above)
5 sequences @ 489 bp
(ave. pairwise identity: 0.63)
New Hampshire format
(total tree length: 1.31)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 163 aa
(ave. pairwise identity: 0.59)
New Hampshire format
(total tree length: 1.57)