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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF03524 alignment |
| O25263_HELPY/41-491 | VVNKKIAYLGDEKPITIW.-.------TSLDNVTVIQLEKDETISY...ITTGFNKGWSIVPNSN--------HIFIQPKSVKSnlmfekeavnfalmtrdyqeflktkklivdapdpkeleeqkkalekekeakeqaqkaqkdkrekrkeeraknranlenltnamsnpqnlsnnknlsefikqqreneldqmerledmqeqaqanalkqieelnkkqaeetikqrakdkiniktdkpqkSPEDNSIELSPSDSAWRTNLVVRTN.....KALYQFIL.---.R--IAQKDNFASAYLTVKLEYPQRHEVSSVIEEELKKREEAKRQKELIKQENLNTTayinrvmmasneqiinkekireekqkiildqakaletqyvhnalkrnPVPRNYNYYQAPEKRSKHIMPSEIFDDGTFTYFGFK---NITLQPAIFVVQ.PDGkLSM--TDAAIDPNMTNSGLRWYRVNEIAEKFKLIKDK---ALVTVINKG |
| Q9PHJ2_XYLFA/27-252 | DPHIRIVDYNPMNLVKLS.-.------TFYGVSTHVQFADGETIQA...VALGDDQAWKVVNREN--------HLFIKPQAKKA.............................................................................................................................................................----------------DTNLTVVTN.....LRTYEFALvVHPrRPNDSTAWADPNLIFSLTFRYPADEAAKA---AASAKQLALKSKLSEVKAKLSDAA...............................................RVGKNTDYWVAGSEK---ISPTAARDDGRFIYLKFT---NNRDMPAVYEVD.EKG.-----NEALINTNVIDG--NTIVVQRLVRRLMLRKGD---AVASVINKS |
| Q9RPX6_BRUSU/29-260 | DSRIQYVDYNSGDVVLVR.-.------ALPGVGARIVFAPGENIED...VASGFTQGWEFKASHN--------ILYLKARSMTL.............................................................................................................................................................SHSNQSIDMAPEPGKWDTNLMVTTD.....QRMYDFDL.---.R--LMPGRNNQRVAYRVQFRYPAAAAAAA-----------VAAAQKRVVQARMNAR...............................................PSPVNWNYTMQVGTNSASIAPTLAYDDGRFTYLRFP---NNRDFPAAFLVA.EDK.-----SESIVNSHIDPSAPDILVLHRVAKQMVLRLGN---KVIGIYNES |
| O50336_ECOLI/30-241 | DHRIRYVTYNPADVVQVD.-.------TVLGVATHIMLEEGEQYLT...HAFGIPKPMPLPGRA---------GIFLSSRTAEL.............................................................................................................................................................---------------ANTNLIVVTD.....RRSYKFRL.---.----QMRNDRNGAMYELAFRYPDTQARQT----------REANARAAVEAAFEQRV...............................................GAYYNLKYMMSGDKD---IAPVNAWDDGRFTYFKFS---ANADLPSIYFVD.AEG.-----NESLVPRTTVGSSNNIIAVHKVNPKWMIRLGN---RALAIFNEA |
| Q9ZDP1_RICPR/29-246 | DPRLRVMIYNPDDVFKFT.-.------GYYGYQASIELAQEEEIVS...ISMGDTTSWQIVPAGH--------RIFIKPMEPDA.............................................................................................................................................................----------------TTNMTLITN.....KRTYFFEL.---.YAAETLDIRDPEMVFNVKFLYPDDENDNM---------SGHMQTFSTSLASPDLTH...............................................PEKYNFNYYISGSEE---IAPIKIFDDGEFTYLQFRD--KNAEISGIFAVD.DSL.-----RESLVNYRLAQDNPNMIILEQVFPKLAIRKGK---KVTCVFNHS |
| Q9RNC9_BARHE/35-260 | DNRIRFVNYDPYNVTKII.-.------GSIRSSVQLEFADDEEVTY...VGIGNSVAWQVAPAGH--------FVFLKPREVQP.............................................................................................................................................................----------------VTNLQIVTSrqdgtKRSYQFEL.---.QVREGDVSAGNDTYFLVKFRYPEDEALRKKLAEAAKAAQREENFVNDIFNTHED--...............................................FGPRNWAYEAQGSPL---IEPASVYDNGKTTTFTFL---GNTEIPAIYLVS.LDG.-----QEALVPKTIKG---NKVIVHATAAQFTLRRGN---DVLCIFNKR |
| Q981S0_RHILO/32-244 | DSRIRFVWYQKDDVVSVP.-.------ASYGASTMIEFGDDEKIET...LGAGDVPAWSIEPNKKGN------VLFVKPIEKNA.............................................................................................................................................................----------------GGNLNVLTN.....KRSYVFFL.---.K---GEFRPVAQQVYAIKFRYPEEASDAA---------LMDEARARASQPNRQGFK...............................................AENANSSYAYKGSSA---NKPLVIYDDGVKTWFRFD---PAREVPAIYVVD.SER.-----NETLVNYRREG---AYIVVDKVNFQWTLRNGH---DATCVFNLR |
| Q9RLR5_LEGPN/29-238 | DIRIKKVVYRENDVIPVH.-.------GIPFTTTQIQFAKQERVLD...IEGGDTTAWMVTYHPQLEN-----MIFIKPTMFDS.............................................................................................................................................................----------------KTNMTVITN.....QRAYYFSL.---.TSAKKLEQEPGKKTYALKFEYPQPQPVNT-----------------KNTTPNKTVH...............................................PKVVNTAYRFSGSPQ---LVPRHVFDDGKFTYFELS---AQGSVPAIFAVDdQSG.-----KESTVNTRREG---KFIVVQRLAPQFTLRQGG---LTASVFNTP |
| Q9A5M6_CAUCR/28-236 | DQRVRIVRYVPDQVVRLD.-.------ATLGFVVTLFFGEDERIEN...VAVGDSLGWQITPNRRAR------VLFVKPNERAT.............................................................................................................................................................----------------ATNMTVVTT.....LRSYNFDL.---.R--AVASSRARQPLFSLRFDYPAPAKAVL--------------ATPAITPPSPPEP...............................................PQEVNKAYSFSGSSQ---GLPERVFDDGVSTFFVFP---AGVDYPAIFAVD.PDN.-----KEAVVNIAQRD---GFVIVDRLASAFVLRRGQ---QVTRIINDG |
| Q98P56_RHILO/9-227 | YNAIQIYPWSEGALYQVY.-.------AAPGQITDIALEPGETLTGdgpIAAGDTARWIIGDTESGSGIARRVHVLVKPSRADI.............................................................................................................................................................----------------TTNLIIATD.....RRSYMLEL.---.R------AGAKPYMPAVAWSYPAQKAGTL----------------RAIATTPAIPA...............................................VAARNYRYGLTGDNPP--WTPVNVYDDGRRVYVEFPRGIVQGEMPPIFVIG.PDG.-----EAEITNSRVYQ---NVLIVDRLFGAAELRLGAGKRQQTVRIVRT |
| Q989I8_RHILO/94-315 | VNAVQVYPFADGALYQLY.-.------AAPERVTDIALQPGEKLTA...VSAGDTVRWVIGDTVSGTGDNQRTHVLVKPFAPGL.............................................................................................................................................................----------------NTNLVITTE.....RRTYHLQL.---.Q------STEKTSMAAISWTYSEDQIIAL---------RQRNAQAEAAAPVSSNVT...............................................LENIRFRYSISGDTPP--WRPTRAFDDGSKVYIEFPRRIDQGEAPPLFIVG.ADG.-----NNQLVNYRMRG---NYYIVDRLFAAAELRLGT-KQQQVVRITRT |
| Q9A4Y6_CAUCR/97-318 | INAIQVYPWTEGALYRLY.-.------TAPERVSDVALEPGEQLTA...VSAGDTVRWVVGDTTSGEGQAKRAHVLIKPFAAGL.............................................................................................................................................................----------------STNMVITTD.....RRAYHLAL.---.E------STDTTAMAAISWVYPQDKLILL---------RRQNSEATAAQPAAVNVA...............................................VDSLHFRYTISGDNPA--WRPVRAWDDGSKVYIEFPERLDQGEAPPLFVVG.PLG.-----DTQLVNYRVRG---NHYIVDRLFAAAELRLGE-APQHVVRVTRT |
| TRBG_AGRTU/57-282 | GLVTK---GADGKVIFLY.GeVQPSVVCSPLQVCDIELQGGEVVRD...VLVGDTVRWKVEPRHRALAGGQAIHLIVKPSEPGL.............................................................................................................................................................----------------VTSMVVTTS.....RRTYHIQL.---.K------SHPTQYMARVGFEYPEDVSTKL-----ADVNAR----LEASTIPGTGVP...............................................AEQLSFSYSISGSAG---WRPTRVYSDGLKTYIQFPRSISGQDAPVLFVV-.SGG.-----QNRIVNYRMKS---NMMVVDYNIDRAVLVSGVGWKQQKVTISRG |
| P71182_ENTAE/66-305 | ATGIKPVAGSGGAIKFVY.GaQQPSIVCAVLQVCDVALQPGEQVNS...INLGDTARWTVEPAITGSGATEVQHLIIKPMDVGL.............................................................................................................................................................----------------ETSLVVITN.....RRSYHFRL.---.R------SHRTEYMPQVSFTYPEEAQAKW-----DAIQRREKQERTDNTLPVTGEY...............................................LGDLSFDYELSGSAS---WKPVRVYNDGRKTIIEMPGTMQQTEAPTLLVVR.KEGgLFTDDETVLVNYRVQG---NRYIVDTVFDRAILIAGVGSSQDRVTISRR |
| Q9PBT7_XYLFA/58-295 | D--LKPFQGSDGSINWPYlPgKQYPIMCAVLQVCDIALQPGENVNG...TNIGDP-RYHVEPAVTGSGASQIIHLILKPLDVGL.............................................................................................................................................................----------------DTTLVLTTD.....RRTYHFRL.---.R------SSRTQLMPFVSFTYPEDAMAKW-----DAIKARETKVRQDNTIPHTGEY...............................................LGNLSFDYVVSGSVR---WKPVRVYNDGRKTVIEMPSKMQQSEAPALLVVH.KDGsLFKDDETQMVNYRVQD---ARYIVDTIFDKAILVSGVGSSQQKVTITRG |