EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03480 - SBP_bac_7)
Bacterial extracellular solute-binding protein, family 7
(Pfam reference: accession no. PF03480)
(Interpro reference: accession no. IPR004682)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
35 sequences @ 326 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 27.80)
nucleotides
(available for above)
35 sequences @ 978 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 18.81)
amino acids, restricted set
(corresp. to available nt seqs)
35 sequences @ 326 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 27.80)