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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03459 phylogeny
for amino acid alignment


 
(((((Q9ABA4_CAUCR/213-275,((Q9I631_PSEAE/184-248,MODE_ECOLI/197-258),((((O26577_METTH/284-346,(O27003_METTH/287-349,(O57896_PYRHO/281-343,Q9V2C0_PYRAB/281-343))),((Q9X8Y8_STRCO/310-371,(MODC_MYCTU/294-359,O31231_ARTNI/288-346)),O27513_METTH/7-70)),(((((MODC_HAEIN/290-351,MODC_PASMU/290-351),MODC_VIBCH/293-359),MODC_ECOLI/290-352),((MODC1_BRAJA/298-364,MODC_RHOCA/290-357),((MODC1_AZOVI/297-361,MODC_PSEAE/297-361),MODC2_AZOVI/294-358))),MODC_RHILO/294-357)),((((Q9AK85_STRCO/3-66,Q9AK85_STRCO/74-136),Q9X8Y5_STRCO/66-128),((((Q9HYG5_PSEAE/6-68,MODE_HERSE/129-192),(MODE_AZOVI/132-195,Q44529_AZOVI/3-66)),((MODE_AZOVI/203-266,(MOPA_RHOCA/199-262,MOPB_RHOCA/204-267)),(P70768_9NOST/3-66,(Q44529_AZOVI/75-138,((MOP1_CLOPA/3-66,MOP_HAEIN/3-66),(Q98KI0_RHILO/3-66,MODE_HERSE/201-264)))))),((MOPA_RHOCA/127-190,MOPB_RHOCA/132-195),Q9ABA4_CAUCR/147-210))),(((MODE_ECOLI/125-189,(MODE_HAEIN/125-189,Q9CMR6_PASMU/126-190)),Q9I631_PSEAE/115-178),Q9PIJ7_CAMJE/66-128))))),((MODE_HAEIN/196-251,Q9CMR6_PASMU/195-259),((((O54119_STRCO/240-292,Q9HY19_PSEAE/236-289),(Q9RUT0_DEIRA/236-288,Q9YB65_AERPE/234-289)),O86831_STRCO/247-302),(((Q9HZ51_PSEAE/238-293,UGPC_ECOLI/237-287),(((Q987D5_RHILO/236-288,Q9PEG1_XYLFA/237-291),Q9RSH1_DEIRA/272-323),Q9KWT9_9SPHN/237-290)),(((MALK_VIBCH/236-290,MALK_ECOLI/236-292),((AGLK_RHIME/237-290,Q98CK7_RHILO/237-290),((Q989G1_RHILO/236-292,LACK_AGRRD/236-292),Q9AI63_9ENTR/237-291))),(Q9AN99_BRAJA/236-290,((Q98D09_RHILO/238-290,Q987L3_RHILO/274-325),(Q9I1D7_PSEAE/236-290,O30494_PSEFL/236-290)))))))),((((((((Q98D09_RHILO/293-351,(Q48394_KLEOX/302-362,Q9PEG1_XYLFA/294-352)),(Q9HZ51_PSEAE/296-354,Q988P3_RHILO/304-356)),(((Q98G42_RHILO/287-345,Y4FO_RHISN/275-333),(O53482_MYCTU/293-347,P96483_STRRE/304-366)),((Q9I1D7_PSEAE/295-354,O30494_PSEFL/292-351),((Q98DB3_RHILO/264-323,Q9R9Q4_RHIME/266-325),(Q98D04_RHILO/265-324,(SMOK_RHOSH/265-324,O68113_RHOCA/265-323)))))),((((((Q9KWT9_9SPHN/295-353,(Q9V2Q1_PYRAB/302-354,O32151_BACSU/304-357)),(((Q9KDS1_BACHD/297-355,Q99X09_STAAM/297-355),(Q97PM5_STRPN/313-366,(Q9CIE2_LACLA/314-367,Q99XX6_STRPY/309-367))),Q9HHQ5_HALN1/296-354)),Q9X103_THEMA/301-359),(((Q97YY4_SULSO/290-349,(((Q9V293_PYRAB/303-361,O57933_PYRHO/307-365),Q9YGA6_THELI/304-362),(Q98GD4_RHILO/201-259,O28665_ARCFU/284-342))),(Q98GC8_RHILO/300-360,((Q98IN2_RHILO/295-353,P73468_SYNY3/335-396),Q98GD2_RHILO/293-352))),(Q987D5_RHILO/290-348,(Q9YG58_AERPE/311-371,Q9WYQ2_THEMA/290-349)))),((AGLK_RHIME/292-352,((Q98FW7_RHILO/287-346,Q98LW3_RHILO/288-345),Q9RSH1_DEIRA/330-388)),(Q98EP4_RHILO/291-346,(Q987L3_RHILO/326-383,(Y4OS_RHISN/304-360,Q982U5_RHILO/289-342))))),(MALK_ECOLI/294-354,(Q9X0V9_THEMA/293-345,Q9YBG2_AERPE/282-341)))),Q9YB65_AERPE/293-351),(((O86751_STRCO/281-340,(((Q98JX3_RHILO/290-350,(Q9HY73_PSEAE/285-344,Q9HY19_PSEAE/296-360)),(O86831_STRCO/312-374,(Q985H3_RHILO/296-358,Q98BX9_RHILO/268-327))),Q98JA8_RHILO/170-230)),(((Q98HB1_RHILO/299-359,Q9I6T2_PSEAE/306-367),Q988Z0_RHILO/313-377),Q986V9_RHILO/299-364)),Q9I6G5_PSEAE/283-346)),Q982L2_RHILO/296-356),((Q97P19_STRPN/274-335,Q9RUT0_DEIRA/293-356),Q98JZ1_RHILO/300-362))),(CYSA_MYCTU/270-334,CYSA_SYNP7/276-339)),O50559_AGRSP/256-319,Q9R702_9RHIZ/291-354);
(((((Q9ABA4_CAUCR/213-275:1.00283,((Q9I631_PSEAE/184-248:0.59585,MODE_ECOLI/197-258:0.66351):0.32950,((((O26577_METTH/284-346:0.82716,(O27003_METTH/287-349:0.81700,(O57896_PYRHO/281-343:0.07787,Q9V2C0_PYRAB/281-343:0.27296):0.17927):0.12033):0.20687,((Q9X8Y8_STRCO/310-371:0.49604,(MODC_MYCTU/294-359:1.06347,O31231_ARTNI/288-346:0.13467):0.33687):0.26624,O27513_METTH/7-70:0.58011):0.18922):0.28466,(((((MODC_HAEIN/290-351:0.34063,MODC_PASMU/290-351:0.30876):0.18125,MODC_VIBCH/293-359:0.50091):0.24903,MODC_ECOLI/290-352:0.36958):0.23905,((MODC1_BRAJA/298-364:0.86439,MODC_RHOCA/290-357:0.51164):0.16187,((MODC1_AZOVI/297-361:0.31187,MODC_PSEAE/297-361:0.18997):0.19847,MODC2_AZOVI/294-358:0.40911):0.06210):0.15659):0.10843,MODC_RHILO/294-357:0.86940):0.21633):0.14646,((((Q9AK85_STRCO/3-66:0.05749,Q9AK85_STRCO/74-136:0.29058):0.40206,Q9X8Y5_STRCO/66-128:0.56456):0.08812,((((Q9HYG5_PSEAE/6-68:0.48268,MODE_HERSE/129-192:0.53249):0.13254,(MODE_AZOVI/132-195:0.35141,Q44529_AZOVI/3-66:0.40236):0.05660):0.06341,((MODE_AZOVI/203-266:0.43310,(MOPA_RHOCA/199-262:0.30277,MOPB_RHOCA/204-267:0.30773):0.10806):0.17739,(P70768_9NOST/3-66:0.44346,(Q44529_AZOVI/75-138:0.36072,((MOP1_CLOPA/3-66:0.30988,MOP_HAEIN/3-66:0.30946):0.14828,(Q98KI0_RHILO/3-66:0.31165,MODE_HERSE/201-264:0.56158):0.16693):0.04094):0.10491):0.10629):0.11957):0.06494,((MOPA_RHOCA/127-190:0.29619,MOPB_RHOCA/132-195:0.37717):0.09739,Q9ABA4_CAUCR/147-210:0.42753):0.15952):0.05844):0.02854,(((MODE_ECOLI/125-189:0.43112,(MODE_HAEIN/125-189:0.48979,Q9CMR6_PASMU/126-190:0.11198):0.38661):0.27788,Q9I631_PSEAE/115-178:0.68487):0.20649,Q9PIJ7_CAMJE/66-128:1.12345):0.03717):0.22535):0.28382):0.00557):0.15857,((MODE_HAEIN/196-251:0.75499,Q9CMR6_PASMU/195-259:0.36534):1.00428,((((O54119_STRCO/240-292:0.55738,Q9HY19_PSEAE/236-289:0.69519):0.25460,(Q9RUT0_DEIRA/236-288:0.52678,Q9YB65_AERPE/234-289:0.82313):0.25766):0.03966,O86831_STRCO/247-302:0.90033):0.20220,(((Q9HZ51_PSEAE/238-293:0.98402,UGPC_ECOLI/237-287:0.35981):0.12741,(((Q987D5_RHILO/236-288:0.54752,Q9PEG1_XYLFA/237-291:0.75154):0.10493,Q9RSH1_DEIRA/272-323:0.66810):0.11135,Q9KWT9_9SPHN/237-290:0.63953):0.15693):0.12480,(((MALK_VIBCH/236-290:0.43258,MALK_ECOLI/236-292:0.46956):0.45389,((AGLK_RHIME/237-290:0.39417,Q98CK7_RHILO/237-290:0.48504):0.40076,((Q989G1_RHILO/236-292:0.58936,LACK_AGRRD/236-292:0.59434):0.17009,Q9AI63_9ENTR/237-291:0.49852):0.16318):0.17649):0.14667,(Q9AN99_BRAJA/236-290:0.69566,((Q98D09_RHILO/238-290:1.01522,Q987L3_RHILO/274-325:0.45364):0.47261,(Q9I1D7_PSEAE/236-290:0.48992,O30494_PSEFL/236-290:0.25698):0.18592):0.17160):0.27234):0.11503):0.29008):0.42810):0.00000):0.11522,((((((((Q98D09_RHILO/293-351:0.95230,(Q48394_KLEOX/302-362:1.07965,Q9PEG1_XYLFA/294-352:0.98096):0.00000):0.07214,(Q9HZ51_PSEAE/296-354:0.92036,Q988P3_RHILO/304-356:0.34282):0.42266):0.08204,(((Q98G42_RHILO/287-345:0.70376,Y4FO_RHISN/275-333:0.83577):0.26262,(O53482_MYCTU/293-347:0.60076,P96483_STRRE/304-366:0.67334):0.22507):0.42817,((Q9I1D7_PSEAE/295-354:0.41481,O30494_PSEFL/292-351:0.26760):0.49096,((Q98DB3_RHILO/264-323:0.38288,Q9R9Q4_RHIME/266-325:0.78206):0.43551,(Q98D04_RHILO/265-324:0.16264,(SMOK_RHOSH/265-324:0.33321,O68113_RHOCA/265-323:0.38873):0.14125):0.18280):0.29014):0.19092):0.24123):0.17412,((((((Q9KWT9_9SPHN/295-353:0.64398,(Q9V2Q1_PYRAB/302-354:0.57569,O32151_BACSU/304-357:0.72809):0.21840):0.09816,(((Q9KDS1_BACHD/297-355:0.40215,Q99X09_STAAM/297-355:0.47368):0.06848,(Q97PM5_STRPN/313-366:0.36310,(Q9CIE2_LACLA/314-367:0.20457,Q99XX6_STRPY/309-367:0.31208):0.30253):0.20471):0.24199,Q9HHQ5_HALN1/296-354:0.75779):0.19372):0.06499,Q9X103_THEMA/301-359:0.46057):0.11766,(((Q97YY4_SULSO/290-349:0.79254,(((Q9V293_PYRAB/303-361:0.32138,O57933_PYRHO/307-365:0.11975):0.06123,Q9YGA6_THELI/304-362:0.31060):0.43504,(Q98GD4_RHILO/201-259:0.79475,O28665_ARCFU/284-342:0.85719):0.16496):0.21593):0.09619,(Q98GC8_RHILO/300-360:0.97982,((Q98IN2_RHILO/295-353:0.85785,P73468_SYNY3/335-396:0.59510):0.23665,Q98GD2_RHILO/293-352:0.87666):0.28559):0.13150):0.00000,(Q987D5_RHILO/290-348:0.78578,(Q9YG58_AERPE/311-371:0.51419,Q9WYQ2_THEMA/290-349:0.69345):0.20055):0.11151):0.09000):0.04198,((AGLK_RHIME/292-352:0.90248,((Q98FW7_RHILO/287-346:0.80040,Q98LW3_RHILO/288-345:0.44955):0.14265,Q9RSH1_DEIRA/330-388:0.63405):0.07984):0.21491,(Q98EP4_RHILO/291-346:0.69621,(Q987L3_RHILO/326-383:0.51179,(Y4OS_RHISN/304-360:0.26839,Q982U5_RHILO/289-342:0.64932):0.13713):0.35561):0.19430):0.12766):0.16479,(MALK_ECOLI/294-354:1.11107,(Q9X0V9_THEMA/293-345:0.37430,Q9YBG2_AERPE/282-341:0.77488):0.04829):0.30486):0.03395):0.10811,Q9YB65_AERPE/293-351:0.96484):0.26125,(((O86751_STRCO/281-340:1.83014,(((Q98JX3_RHILO/290-350:0.82588,(Q9HY73_PSEAE/285-344:0.86944,Q9HY19_PSEAE/296-360:1.05131):0.15944):0.38706,(O86831_STRCO/312-374:0.89294,(Q985H3_RHILO/296-358:0.71467,Q98BX9_RHILO/268-327:0.61008):0.41132):0.05603):0.19308,Q98JA8_RHILO/170-230:0.56827):0.25691):0.14983,(((Q98HB1_RHILO/299-359:0.65307,Q9I6T2_PSEAE/306-367:0.96171):0.38707,Q988Z0_RHILO/313-377:0.85975):0.04699,Q986V9_RHILO/299-364:0.94756):0.16150):0.09208,Q9I6G5_PSEAE/283-346:1.10120):0.16304):0.17070,Q982L2_RHILO/296-356:1.47804):0.14319,((Q97P19_STRPN/274-335:1.33645,Q9RUT0_DEIRA/293-356:1.25815):0.15100,Q98JZ1_RHILO/300-362:1.04416):0.29393):0.13569):0.44604,(CYSA_MYCTU/270-334:1.14801,CYSA_SYNP7/276-339:0.82429):0.25755):1.05584,O50559_AGRSP/256-319:0.02247,Q9R702_9RHIZ/291-354:0.30246);