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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03446 phylogeny
for restricted amino acid alignment


 
(((((((((((((Q84H84_9MICC/2-166,Q92PN5_RHIME/4-165),(((Q87V80_PSESM/3-165,(Q89R44_BRAJA/8-170,Q92TW9_RHIME/2-164)),(Q7N447_PHOLL/5-169,((Q849Y0_ECOLI/4-167,(Q8FEL0_ECOL6/8-169,Q8ZMG4_SALTY/8-169)),(YGBJ_HAEIN/5-168,Q9CL76_PASMU/4-167)))),Q8VYC5_ARATH/323-486)),(((((Q8U8K6_AGRT5/20-182,Q930C6_RHIME/2-164),(Q8KL12_RHIET/6-167,(Q8FBG0_ECOL6/68-231,YIHU_SALTY/3-164))),(Q7VYY0_BORPE/2-172,Q8ZAY4_YERPE/4-168)),((Q7WCG3_BORPA/4-170,Q7WPN1_BORBR/137-302),(((Q6F842_ACIAD/6-163,Q9JTH7_NEIMA/6-164),(Q89HA0_BRAJA/23-186,(Q7WAJ7_BORPA/2-163,(Q88NR2_PSEPK/5-168,Q9HYT2_PSEAE/5-171)))),(Q8UB58_AGRT5/11-172,((Q8UBW3_AGRT5/9-169,Q930R8_RHIME/4-164),Q9ZNH7_9GAMM/3-163))))),(Q89RT2_BRAJA/5-167,Q8XWP4_RALSO/1-167))),((((Q81DR6_BACCR/1-163,Q8ES28_OCEIH/1-163),Q86R98_DROME/49-209),((Q6DC72_BRARE/32-194,Q83D20_COXBU/1-163),(Q889G7_PSESM/2-162,((((MMSB_MYCTU/3-160,Q73S63_MYCPA/4-163),((Q8U8G3_AGRT5/11-170,Q92TQ7_RHIME/1-160),((Q6N493_RHOPA/1-160,Q89N85_BRAJA/1-160),(Q8G003_BRUSU/1-161,Q98L30_RHILO/1-161)))),Q9A8J9_CAUCR/1-161),((Q87H47_VIBPA/1-163,((Q6LIA1_PHOPR/1-167,Q87II1_VIBPA/1-167),Q8D6N9_VIBVU/28-194)),((((Q7VYA3_BORPE/1-162,Q9I5I6_PSEAE/1-163),Q8PB60_XANCP/1-163),Q7NWA9_CHRVO/1-163),MMSB_PSEAE/1-163)))))),(Q743I1_MYCPA/11-169,(Q7WNR3_BORBR/28-189,(Q7W4M1_BORPA/4-164,Q89UN2_BRAJA/54-214))))),(Q83Q26_SHIFL/5-167,(((Q92TV9_RHIME/1-163,Q9I3L2_PSEAE/1-163),Q6LPW7_PHOPR/1-163),(Q82WJ8_NITEU/3-166,((Q89QG0_BRAJA/1-162,Q8XUA8_RALSO/4-172),Q98N82_RHILO/1-163))))),(Y229_SYNY3/3-167,Q82LI5_STRAW/13-175)),((((((Q7W489_BORPA/14-178,Q9I3E1_PSEAE/1-164),(Q8EDH8_SHEON/1-164,(Q6N8D0_RHOPA/1-165,(Q92PA2_RHIME/1-165,(Q8G0Y2_BRUSU/3-167,Q98MJ7_RHILO/1-165))))),Q9KNF7_VIBCH/24-187),Q87G98_VIBPA/3-166),(Q6UCZ9_9PROT/20-183,Q6FA14_ACIAD/2-158)),(((Q7UTL3_RHOBA/7-171,(Q949M8_ARATH/34-195,(Q8LQ70_ORYSA/19-182,Q9SZE1_ARATH/37-199))),((Q830A7_ENTFA/1-163,Q88UE9_LACPL/1-163),Q9CDK4_LACLA/1-163)),(((Q6HEC3_BACHK/5-167,(Q8XNE4_CLOPE/1-163,((Q8ESP3_OCEIH/6-168,YKWC_BACSU/2-164),Q97DX8_CLOAB/5-167))),Q73P00_TREDE/5-167),Q8Y8A5_LISMO/1-163)))),(((Q8ZU27_PYRAE/1-148,((O66788_AQUAE/1-164,(Q9CDN4_LACLA/1-167,Q9RU02_DEIRA/2-172)),((Q8SRX1_ENCCU/6-174,(Q8FXG6_BRUSU/3-176,(Q8UF73_AGRT5/3-176,Q98GH7_RHILO/3-176))),(((((Q8SAQ6_CHLRE/3-178,(O22111_SOYBN/5-180,(Q8LG34_ARATH/6-180,Q94KU2_SPIOL/48-222))),(Q8IKT2_PLAF7/1-174,Q9SME1_9PHAE/6-179)),((Q8RD52_THETN/1-173,Q9WYR9_THEMA/2-174),Q8R8Q4_THETN/1-173)),(((Q6MEF8_PARUW/5-177,(((6PGD_TREPA/2-175,(Q7UV82_RHOBA/4-179,Q8A8E5_BACTN/6-184)),Q8TA03_DICDI/5-179),((6PGD_HAEIN/4-177,Q83UJ4_NEIGO/2-175),(((6PGD_CERCA/4-176,6PGD_SHEEP/2-175),Q17761_CAEEL/3-175),((6PGD_SCHPO/6-179,(6PGD1_YEAST/2-174,((Q754E1_ASHGO/11-183,6PGD_CANAL/28-200),Q874Q3_ASPNG/6-178))),6PGD_CUNEL/5-178))))),(6PGD_CHLPN/2-174,(Q823H8_CHLCV/4-176,6PGD_CHLTR/4-176))),Q893F9_CLOTE/3-174)),(((((6PGD_TRYBB/2-178,Q95UN7_LEITR/2-178),((Q6A799_PROAC/8-180,Q826E4_STRAW/4-177),((Q6ADQ1_LEIXX/7-179,Q8G729_BIFLO/5-177),((O32911_MYCLE/13-185,(Q6NHC5_CORDI/7-179,Q8FTI1_COREF/13-185)),Q83G38_TROWT/2-173)))),(Q7NLK6_GLOVI/16-188,((Q8DLC0_SYNEL/3-175,(Q8YLM3_ANASP/3-175,6PGD_SYNY3/10-185)),(6PGD_SYNP7/3-175,Q7U767_SYNPX/3-175)))),(((6PGD2_BACSU/2-173,Q8CXN9_OCEIH/2-174),((6PGD_STAEP/2-174,Q81VN1_BACAN/3-174),(((6PGD_LACLC/3-176,Q88WS6_LACPL/5-178),Q836Q9_ENTFA/3-175),(((6PGD_BUCBP/3-174,(Q7VRX5_CANBF/4-176,Q6UA37_9ENTR/18-190)),(6PGD_BUCAI/3-174,6PGD_BUCAP/3-174)),(O66227_ECOLI/3-175,Q8Y7B0_LISMO/3-174))))),Q74H97_LACJO/1-172)),(6PGD_BACSU/2-173,Q8CX65_OCEIH/1-172)))))),Q6BYY0_DEBHA/18-210),((((Q89GM2_BRAJA/8-170,Q98K09_RHILO/7-170),Q98I20_RHILO/4-164),Q9K9L1_BACHD/2-164),Q7U3U8_SYNPX/5-167))),(Q8RWF1_ARATH/51-213,(Q6P1Q2_HUMAN/198-360,Q8T079_DROME/317-478))),Q8TT25_METAC/9-171),(Q97C72_THEVO/4-161,Q9HLR4_THEAC/9-166)),Q8F4I7_LEPIN/4-163),Q82MW0_STRAW/4-163,Q9RD04_STRCO/4-163);
(((((((((((((Q84H84_9MICC/2-166:0.65748,Q92PN5_RHIME/4-165:0.59069):0.07692,(((Q87V80_PSESM/3-165:0.53269,(Q89R44_BRAJA/8-170:0.24278,Q92TW9_RHIME/2-164:0.20605):0.19636):0.06839,(Q7N447_PHOLL/5-169:0.44435,((Q849Y0_ECOLI/4-167:0.22595,(Q8FEL0_ECOL6/8-169:0.17812,Q8ZMG4_SALTY/8-169:0.14531):0.06284):0.08497,(YGBJ_HAEIN/5-168:0.16477,Q9CL76_PASMU/4-167:0.08674):0.14805):0.18827):0.28876):0.07198,Q8VYC5_ARATH/323-486:0.59671):0.20754):0.18173,(((((Q8U8K6_AGRT5/20-182:0.08962,Q930C6_RHIME/2-164:0.16034):0.60647,(Q8KL12_RHIET/6-167:0.49022,(Q8FBG0_ECOL6/68-231:0.19438,YIHU_SALTY/3-164:0.19272):0.40104):0.06152):0.09424,(Q7VYY0_BORPE/2-172:0.62790,Q8ZAY4_YERPE/4-168:0.63276):0.12866):0.05600,((Q7WCG3_BORPA/4-170:0.54061,Q7WPN1_BORBR/137-302:0.54541):0.15047,(((Q6F842_ACIAD/6-163:0.58222,Q9JTH7_NEIMA/6-164:0.80054):0.29922,(Q89HA0_BRAJA/23-186:0.44184,(Q7WAJ7_BORPA/2-163:0.45146,(Q88NR2_PSEPK/5-168:0.20671,Q9HYT2_PSEAE/5-171:0.21133):0.18956):0.07095):0.04181):0.12992,(Q8UB58_AGRT5/11-172:0.54784,((Q8UBW3_AGRT5/9-169:0.27261,Q930R8_RHIME/4-164:0.16864):0.10602,Q9ZNH7_9GAMM/3-163:0.40504):0.10169):0.09422):0.15661):0.04875):0.08607,(Q89RT2_BRAJA/5-167:0.80176,Q8XWP4_RALSO/1-167:0.47701):0.14218):0.10069):0.04439,((((Q81DR6_BACCR/1-163:0.28086,Q8ES28_OCEIH/1-163:0.33140):0.34519,Q86R98_DROME/49-209:0.50472):0.13351,((Q6DC72_BRARE/32-194:0.53704,Q83D20_COXBU/1-163:0.44847):0.07067,(Q889G7_PSESM/2-162:0.43283,((((MMSB_MYCTU/3-160:0.15111,Q73S63_MYCPA/4-163:0.16087):0.30165,((Q8U8G3_AGRT5/11-170:0.28608,Q92TQ7_RHIME/1-160:0.21837):0.09415,((Q6N493_RHOPA/1-160:0.13489,Q89N85_BRAJA/1-160:0.16179):0.15911,(Q8G003_BRUSU/1-161:0.14976,Q98L30_RHILO/1-161:0.14223):0.10084):0.06929):0.05554):0.05445,Q9A8J9_CAUCR/1-161:0.43244):0.14745,((Q87H47_VIBPA/1-163:0.22483,((Q6LIA1_PHOPR/1-167:0.10147,Q87II1_VIBPA/1-167:0.17659):0.16859,Q8D6N9_VIBVU/28-194:0.19087):0.15973):0.06765,((((Q7VYA3_BORPE/1-162:0.18490,Q9I5I6_PSEAE/1-163:0.20920):0.02210,Q8PB60_XANCP/1-163:0.18935):0.08718,Q7NWA9_CHRVO/1-163:0.23541):0.09841,MMSB_PSEAE/1-163:0.20528):0.13826):0.04975):0.07003):0.12285):0.07801):0.06545,(Q743I1_MYCPA/11-169:0.70583,(Q7WNR3_BORBR/28-189:0.48095,(Q7W4M1_BORPA/4-164:0.42660,Q89UN2_BRAJA/54-214:0.42488):0.15277):0.23191):0.13250):0.04895):0.07624,(Q83Q26_SHIFL/5-167:0.42989,(((Q92TV9_RHIME/1-163:0.32013,Q9I3L2_PSEAE/1-163:0.27288):0.05497,Q6LPW7_PHOPR/1-163:0.22457):0.07057,(Q82WJ8_NITEU/3-166:0.43473,((Q89QG0_BRAJA/1-162:0.22294,Q8XUA8_RALSO/4-172:0.28547):0.12045,Q98N82_RHILO/1-163:0.22000):0.06685):0.05254):0.28902):0.11448):0.05120,(Y229_SYNY3/3-167:0.55644,Q82LI5_STRAW/13-175:0.45479):0.16233):0.02473,((((((Q7W489_BORPA/14-178:0.20637,Q9I3E1_PSEAE/1-164:0.35738):0.07839,(Q8EDH8_SHEON/1-164:0.33678,(Q6N8D0_RHOPA/1-165:0.17365,(Q92PA2_RHIME/1-165:0.10158,(Q8G0Y2_BRUSU/3-167:0.16141,Q98MJ7_RHILO/1-165:0.18499):0.04785):0.07893):0.08418):0.02608):0.11667,Q9KNF7_VIBCH/24-187:0.36934):0.08538,Q87G98_VIBPA/3-166:0.27556):0.15455,(Q6UCZ9_9PROT/20-183:0.50161,Q6FA14_ACIAD/2-158:0.81521):0.04722):0.14618,(((Q7UTL3_RHOBA/7-171:0.30256,(Q949M8_ARATH/34-195:0.48444,(Q8LQ70_ORYSA/19-182:0.34585,Q9SZE1_ARATH/37-199:0.24683):0.02696):0.19293):0.15470,((Q830A7_ENTFA/1-163:0.27897,Q88UE9_LACPL/1-163:0.29753):0.10359,Q9CDK4_LACLA/1-163:0.30927):0.10556):0.07322,(((Q6HEC3_BACHK/5-167:0.37912,(Q8XNE4_CLOPE/1-163:0.41301,((Q8ESP3_OCEIH/6-168:0.38357,YKWC_BACSU/2-164:0.15538):0.06671,Q97DX8_CLOAB/5-167:0.26354):0.06709):0.03501):0.06850,Q73P00_TREDE/5-167:0.48676):0.05387,Q8Y8A5_LISMO/1-163:0.33146):0.06290):0.16454):0.14620):0.05479,(((Q8ZU27_PYRAE/1-148:1.38215,((O66788_AQUAE/1-164:0.66792,(Q9CDN4_LACLA/1-167:0.50133,Q9RU02_DEIRA/2-172:0.61088):0.19249):0.09554,((Q8SRX1_ENCCU/6-174:0.49416,(Q8FXG6_BRUSU/3-176:0.39032,(Q8UF73_AGRT5/3-176:0.17026,Q98GH7_RHILO/3-176:0.17843):0.14321):0.18326):0.11915,(((((Q8SAQ6_CHLRE/3-178:0.28033,(O22111_SOYBN/5-180:0.14450,(Q8LG34_ARATH/6-180:0.08755,Q94KU2_SPIOL/48-222:0.18623):0.11118):0.09021):0.08916,(Q8IKT2_PLAF7/1-174:0.32169,Q9SME1_9PHAE/6-179:0.39553):0.05184):0.19754,((Q8RD52_THETN/1-173:0.24782,Q9WYR9_THEMA/2-174:0.14841):0.06642,Q8R8Q4_THETN/1-173:0.10215):0.09291):0.05998,(((Q6MEF8_PARUW/5-177:0.14854,(((6PGD_TREPA/2-175:0.29024,(Q7UV82_RHOBA/4-179:0.25357,Q8A8E5_BACTN/6-184:0.30972):0.08671):0.06892,Q8TA03_DICDI/5-179:0.16664):0.09117,((6PGD_HAEIN/4-177:0.04298,Q83UJ4_NEIGO/2-175:0.20384):0.13836,(((6PGD_CERCA/4-176:0.20702,6PGD_SHEEP/2-175:0.12041):0.05767,Q17761_CAEEL/3-175:0.20329):0.04157,((6PGD_SCHPO/6-179:0.16635,(6PGD1_YEAST/2-174:0.12427,((Q754E1_ASHGO/11-183:0.15102,6PGD_CANAL/28-200:0.10021):0.06207,Q874Q3_ASPNG/6-178:0.10089):0.02168):0.04528):0.05948,6PGD_CUNEL/5-178:0.13942):0.01117):0.07563):0.06352):0.00000):0.14755,(6PGD_CHLPN/2-174:0.12529,(Q823H8_CHLCV/4-176:0.07551,6PGD_CHLTR/4-176:0.23245):0.07478):0.13271):0.11873,Q893F9_CLOTE/3-174:0.38921):0.08549):0.06327,(((((6PGD_TRYBB/2-178:0.10097,Q95UN7_LEITR/2-178:0.14772):0.43156,((Q6A799_PROAC/8-180:0.35345,Q826E4_STRAW/4-177:0.17330):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