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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03446 phylogeny
for nucleotide alignment


 
(((((((((((((((((((((Q8CXN9_OCEIH/2-174,(6PGD2_BACSU/2-173,Q81VN1_BACAN/3-174)),((((Q88WS6_LACPL/5-178,Q836Q9_ENTFA/3-175),6PGD_LACLC/3-176),(O66227_ECOLI/3-175,Q8Y7B0_LISMO/3-174)),6PGD_STAEP/2-174)),((6PGD_BUCBP/3-174,(6PGD_BUCAI/3-174,6PGD_BUCAP/3-174)),(Q7VRX5_CANBF/4-176,Q6UA37_9ENTR/18-190))),Q74H97_LACJO/1-172),((6PGD_CHLTR/4-176,(Q823H8_CHLCV/4-176,6PGD_CHLPN/2-174)),((((6PGD_HAEIN/4-177,Q83UJ4_NEIGO/2-175),(6PGD_CUNEL/5-178,(((((Q754E1_ASHGO/11-183,Q874Q3_ASPNG/6-178),6PGD1_YEAST/2-174),6PGD_CANAL/28-200),6PGD_SCHPO/6-179),(6PGD_CERCA/4-176,(Q17761_CAEEL/3-175,6PGD_SHEEP/2-175))))),(Q6MEF8_PARUW/5-177,Q8TA03_DICDI/5-179)),(Q8A8E5_BACTN/6-184,(Q7UV82_RHOBA/4-179,((((((Q8DLC0_SYNEL/3-175,(Q8YLM3_ANASP/3-175,6PGD_SYNY3/10-185)),(6PGD_SYNP7/3-175,Q7U767_SYNPX/3-175)),Q7NLK6_GLOVI/16-188),Q83G38_TROWT/2-173),((Q8FXG6_BRUSU/3-176,(Q8UF73_AGRT5/3-176,Q98GH7_RHILO/3-176)),(((((Q826E4_STRAW/4-177,O32911_MYCLE/13-185),(Q6NHC5_CORDI/7-179,Q8FTI1_COREF/13-185)),(Q6ADQ1_LEIXX/7-179,Q8G729_BIFLO/5-177)),Q6A799_PROAC/8-180),((6PGD_TRYBB/2-178,Q95UN7_LEITR/2-178),((Q8SAQ6_CHLRE/3-178,(O22111_SOYBN/5-180,(Q8LG34_ARATH/6-180,Q94KU2_SPIOL/48-222))),Q9SME1_9PHAE/6-179))))),6PGD_TREPA/2-175)))))),((Q8IKT2_PLAF7/1-174,Q893F9_CLOTE/3-174),((Q8RD52_THETN/1-173,Q9WYR9_THEMA/2-174),Q8R8Q4_THETN/1-173))),(6PGD_BACSU/2-173,Q8CX65_OCEIH/1-172)),Q8SRX1_ENCCU/6-174),(Q9CDN4_LACLA/1-167,(O66788_AQUAE/1-164,(Q8ZU27_PYRAE/1-148,Q9RU02_DEIRA/2-172)))),((((Q9CDK4_LACLA/1-163,((Q949M8_ARATH/34-195,(Q8LQ70_ORYSA/19-182,Q9SZE1_ARATH/37-199)),Q7UTL3_RHOBA/7-171)),(Q830A7_ENTFA/1-163,Q88UE9_LACPL/1-163)),((Q73P00_TREDE/5-167,Q8Y8A5_LISMO/1-163),((YKWC_BACSU/2-164,Q6HEC3_BACHK/5-167),(Q8XNE4_CLOPE/1-163,(Q8ESP3_OCEIH/6-168,Q97DX8_CLOAB/5-167))))),((Q97C72_THEVO/4-161,Q9HLR4_THEAC/9-166),((Q8RWF1_ARATH/51-213,(Q6P1Q2_HUMAN/198-360,Q8T079_DROME/317-478)),Q8TT25_METAC/9-171)))),(Q8F4I7_LEPIN/4-163,Y229_SYNY3/3-167)),Q6F842_ACIAD/6-163),(Q6UCZ9_9PROT/20-183,((Q87G98_VIBPA/3-166,(((Q98MJ7_RHILO/1-165,((Q6N8D0_RHOPA/1-165,(Q7W489_BORPA/14-178,Q9I3E1_PSEAE/1-164)),Q92PA2_RHIME/1-165)),Q8G0Y2_BRUSU/3-167),Q9KNF7_VIBCH/24-187)),Q8EDH8_SHEON/1-164))),Q6FA14_ACIAD/2-158),Q9K9L1_BACHD/2-164),(Q8ZAY4_YERPE/4-168,Q6BYY0_DEBHA/18-210)),Q8VYC5_ARATH/323-486),(((Q89GM2_BRAJA/8-170,Q98K09_RHILO/7-170),(((Q6DC72_BRARE/32-194,(((Q83D20_COXBU/1-163,(Q81DR6_BACCR/1-163,Q8ES28_OCEIH/1-163)),((Q6LIA1_PHOPR/1-167,Q87II1_VIBPA/1-167),Q8D6N9_VIBVU/28-194)),Q87H47_VIBPA/1-163)),Q86R98_DROME/49-209),(((Q84H84_9MICC/2-166,Q92PN5_RHIME/4-165),(Q83Q26_SHIFL/5-167,(Q9I3L2_PSEAE/1-163,(((Q89QG0_BRAJA/1-162,Q8XUA8_RALSO/4-172),(Q92TV9_RHIME/1-163,Q98N82_RHILO/1-163)),(Q82WJ8_NITEU/3-166,Q6LPW7_PHOPR/1-163))))),(((Q82LI5_STRAW/13-175,Q8XWP4_RALSO/1-167),(((((MMSB_MYCTU/3-160,Q73S63_MYCPA/4-163),(((Q6N493_RHOPA/1-160,Q89N85_BRAJA/1-160),(Q9A8J9_CAUCR/1-161,(Q8G003_BRUSU/1-161,Q98L30_RHILO/1-161))),(Q8U8G3_AGRT5/11-170,Q92TQ7_RHIME/1-160))),((Q7NWA9_CHRVO/1-163,(Q7VYA3_BORPE/1-162,Q8PB60_XANCP/1-163)),(MMSB_PSEAE/1-163,Q9I5I6_PSEAE/1-163))),Q889G7_PSESM/2-162),((((Q8U8K6_AGRT5/20-182,Q930C6_RHIME/2-164),(Q8KL12_RHIET/6-167,(Q8FBG0_ECOL6/68-231,YIHU_SALTY/3-164))),((Q7VYY0_BORPE/2-172,(Q7WCG3_BORPA/4-170,Q7WPN1_BORBR/137-302)),(((Q7WAJ7_BORPA/2-163,(Q88NR2_PSEPK/5-168,Q9HYT2_PSEAE/5-171)),(Q89HA0_BRAJA/23-186,Q7U3U8_SYNPX/5-167)),(((Q82MW0_STRAW/4-163,Q9RD04_STRCO/4-163),Q89RT2_BRAJA/5-167),(Q8UB58_AGRT5/11-172,((Q8UBW3_AGRT5/9-169,Q930R8_RHIME/4-164),Q9ZNH7_9GAMM/3-163)))))),(Q98I20_RHILO/4-164,(Q7WNR3_BORBR/28-189,(Q7W4M1_BORPA/4-164,Q89UN2_BRAJA/54-214)))))),(Q9JTH7_NEIMA/6-164,Q743I1_MYCPA/11-169))))),(Q87V80_PSESM/3-165,(Q89R44_BRAJA/8-170,Q92TW9_RHIME/2-164)))),Q7N447_PHOLL/5-169),(Q8FEL0_ECOL6/8-169,(Q849Y0_ECOLI/4-167,Q8ZMG4_SALTY/8-169))),YGBJ_HAEIN/5-168,Q9CL76_PASMU/4-167);
(((((((((((((((((((((Q8CXN9_OCEIH/2-174:0.18126,(6PGD2_BACSU/2-173:0.18368,Q81VN1_BACAN/3-174:0.27022):0.04663):0.05816,((((Q88WS6_LACPL/5-178:0.23000,Q836Q9_ENTFA/3-175:0.11452):0.05210,6PGD_LACLC/3-176:0.18627):0.04431,(O66227_ECOLI/3-175:0.23531,Q8Y7B0_LISMO/3-174:0.17127):0.06425):0.05447,6PGD_STAEP/2-174:0.21419):0.05922):0.03904,((6PGD_BUCBP/3-174:0.16857,(6PGD_BUCAI/3-174:0.15933,6PGD_BUCAP/3-174:0.09561):0.07932):0.03428,(Q7VRX5_CANBF/4-176:0.23903,Q6UA37_9ENTR/18-190:0.13400):0.04105):0.12116):0.04488,Q74H97_LACJO/1-172:0.29404):0.05056,((6PGD_CHLTR/4-176:0.18960,(Q823H8_CHLCV/4-176:0.14319,6PGD_CHLPN/2-174:0.18840):0.06233):0.13818,((((6PGD_HAEIN/4-177:0.10325,Q83UJ4_NEIGO/2-175:0.28207):0.13209,(6PGD_CUNEL/5-178:0.11045,(((((Q754E1_ASHGO/11-183:0.20007,Q874Q3_ASPNG/6-178:0.16547):0.11119,6PGD1_YEAST/2-174:0.11453):0.06432,6PGD_CANAL/28-200:0.11687):0.06406,6PGD_SCHPO/6-179:0.19307):0.03557,(6PGD_CERCA/4-176:0.26450,(Q17761_CAEEL/3-175:0.20249,6PGD_SHEEP/2-175:0.23098):0.07267):0.06973):0.04880):0.05740):0.05045,(Q6MEF8_PARUW/5-177:0.23704,Q8TA03_DICDI/5-179:0.16954):0.04684):0.05204,(Q8A8E5_BACTN/6-184:0.30749,(Q7UV82_RHOBA/4-179:0.25307,((((((Q8DLC0_SYNEL/3-175:0.20681,(Q8YLM3_ANASP/3-175:0.23115,6PGD_SYNY3/10-185:0.20417):0.06594):0.06756,(6PGD_SYNP7/3-175:0.13403,Q7U767_SYNPX/3-175:0.30744):0.06429):0.08051,Q7NLK6_GLOVI/16-188:0.21730):0.04814,Q83G38_TROWT/2-173:0.53767):0.04856,((Q8FXG6_BRUSU/3-176:0.24345,(Q8UF73_AGRT5/3-176:0.16882,Q98GH7_RHILO/3-176:0.17764):0.09869):0.16460,(((((Q826E4_STRAW/4-177:0.19789,O32911_MYCLE/13-185:0.23262):0.07347,(Q6NHC5_CORDI/7-179:0.22249,Q8FTI1_COREF/13-185:0.08973):0.07404):0.03220,(Q6ADQ1_LEIXX/7-179:0.18258,Q8G729_BIFLO/5-177:0.18696):0.07028):0.02806,Q6A799_PROAC/8-180:0.36442):0.08261,((6PGD_TRYBB/2-178:0.26732,Q95UN7_LEITR/2-178:0.11084):0.19578,((Q8SAQ6_CHLRE/3-178:0.20300,(O22111_SOYBN/5-180:0.25713,(Q8LG34_ARATH/6-180:0.16042,Q94KU2_SPIOL/48-222:0.14504):0.10237):0.14607):0.07219,Q9SME1_9PHAE/6-179:0.29316):0.15285):0.07287):0.05640):0.10026):0.11995,6PGD_TREPA/2-175:0.27146):0.07420):0.09870):0.15367):0.07582):0.09431):0.05666,((Q8IKT2_PLAF7/1-174:0.30495,Q893F9_CLOTE/3-174:0.24639):0.04160,((Q8RD52_THETN/1-173:0.19041,Q9WYR9_THEMA/2-174:0.27350):0.05986,Q8R8Q4_THETN/1-173:0.15968):0.11165):0.04004):0.01598,(6PGD_BACSU/2-173:0.32680,Q8CX65_OCEIH/1-172:0.24273):0.10972):0.04429,Q8SRX1_ENCCU/6-174:0.58651):0.03624,(Q9CDN4_LACLA/1-167:0.39673,(O66788_AQUAE/1-164:0.35563,(Q8ZU27_PYRAE/1-148:0.72938,Q9RU02_DEIRA/2-172:0.51381):0.24524):0.15505):0.10309):0.25516,((((Q9CDK4_LACLA/1-163:0.19415,((Q949M8_ARATH/34-195:0.39042,(Q8LQ70_ORYSA/19-182:0.39671,Q9SZE1_ARATH/37-199:0.19585):0.11819):0.13055,Q7UTL3_RHOBA/7-171:0.36304):0.19255):0.06431,(Q830A7_ENTFA/1-163:0.20372,Q88UE9_LACPL/1-163:0.35154):0.10537):0.07750,((Q73P00_TREDE/5-167:0.36452,Q8Y8A5_LISMO/1-163:0.25568):0.05089,((YKWC_BACSU/2-164:0.20215,Q6HEC3_BACHK/5-167:0.25649):0.08310,(Q8XNE4_CLOPE/1-163:0.25539,(Q8ESP3_OCEIH/6-168:0.31723,Q97DX8_CLOAB/5-167:0.24123):0.07676):0.04056):0.04750):0.02585):0.07857,((Q97C72_THEVO/4-161:0.33057,Q9HLR4_THEAC/9-166:0.32920):0.30105,((Q8RWF1_ARATH/51-213:0.29090,(Q6P1Q2_HUMAN/198-360:0.36726,Q8T079_DROME/317-478:0.31227):0.25086):0.16020,Q8TT25_METAC/9-171:0.49650):0.05342):0.11865):0.04732):0.05196,(Q8F4I7_LEPIN/4-163:0.55266,Y229_SYNY3/3-167:0.40321):0.10308):0.02735,Q6F842_ACIAD/6-163:0.68652):0.02425,(Q6UCZ9_9PROT/20-183:0.37274,((Q87G98_VIBPA/3-166:0.24406,(((Q98MJ7_RHILO/1-165:0.16179,((Q6N8D0_RHOPA/1-165:0.17574,(Q7W489_BORPA/14-178:0.17364,Q9I3E1_PSEAE/1-164:0.26786):0.09411):0.06190,Q92PA2_RHIME/1-165:0.11558):0.08016):0.09505,Q8G0Y2_BRUSU/3-167:0.14824):0.13865,Q9KNF7_VIBCH/24-187:0.25238):0.13892):0.07904,Q8EDH8_SHEON/1-164:0.27102):0.16696):0.07380):0.10548,Q6FA14_ACIAD/2-158:0.48462):0.04658,Q9K9L1_BACHD/2-164:0.51616):0.08370,(Q8ZAY4_YERPE/4-168:0.53685,Q6BYY0_DEBHA/18-210:0.61108):0.07951):0.05509,Q8VYC5_ARATH/323-486:0.44818):0.12804,(((Q89GM2_BRAJA/8-170:0.38750,Q98K09_RHILO/7-170:0.24066):0.25273,(((Q6DC72_BRARE/32-194:0.49101,(((Q83D20_COXBU/1-163:0.34015,(Q81DR6_BACCR/1-163:0.26511,Q8ES28_OCEIH/1-163:0.29869):0.29896):0.07139,((Q6LIA1_PHOPR/1-167:0.13841,Q87II1_VIBPA/1-167:0.27536):0.16038,Q8D6N9_VIBVU/28-194:0.21359):0.13593):0.06175,Q87H47_VIBPA/1-163:0.25529):0.10808):0.12741,Q86R98_DROME/49-209:0.36542):0.09769,(((Q84H84_9MICC/2-166:0.36940,Q92PN5_RHIME/4-165:0.42085):0.11175,(Q83Q26_SHIFL/5-167:0.51486,(Q9I3L2_PSEAE/1-163:0.19036,(((Q89QG0_BRAJA/1-162:0.22242,Q8XUA8_RALSO/4-172:0.18135):0.04272,(Q92TV9_RHIME/1-163:0.23426,Q98N82_RHILO/1-163:0.15150):0.07450):0.04461,(Q82WJ8_NITEU/3-166:0.28312,Q6LPW7_PHOPR/1-163:0.33130):0.18042):0.01985):0.11521):0.07412):0.01369,(((Q82LI5_STRAW/13-175:0.29907,Q8XWP4_RALSO/1-167:0.34977):0.07651,(((((MMSB_MYCTU/3-160:0.16269,Q73S63_MYCPA/4-163:0.10384):0.21542,(((Q6N493_RHOPA/1-160:0.09214,Q89N85_BRAJA/1-160:0.14716):0.10385,(Q9A8J9_CAUCR/1-161:0.34053,(Q8G003_BRUSU/1-161:0.20918,Q98L30_RHILO/1-161:0.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