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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03446 phylogeny
for amino acid alignment


 
((((((((((((((((Q8U8K6_AGRT5/20-182,Q930C6_RHIME/2-164),(Q8KL12_RHIET/6-167,(Q8FBG0_ECOL6/68-231,YIHU_SALTY/3-164))),(((Q6F842_ACIAD/6-163,Q9JTH7_NEIMA/6-164),(Q89HA0_BRAJA/23-186,(Q7WAJ7_BORPA/2-163,(Q88NR2_PSEPK/5-168,Q9HYT2_PSEAE/5-171)))),(Q8UB58_AGRT5/11-172,((Q8UBW3_AGRT5/9-169,Q930R8_RHIME/4-164),Q9ZNH7_9GAMM/3-163)))),(Q7WCG3_BORPA/4-170,Q7WPN1_BORBR/137-302)),(Q89RT2_BRAJA/5-167,Q8XWP4_RALSO/1-167)),(Q7VYY0_BORPE/2-172,Q8ZAY4_YERPE/4-168)),((((((Q87V80_PSESM/3-165,(Q89R44_BRAJA/8-170,Q92TW9_RHIME/2-164)),(Q7N447_PHOLL/5-169,((Q849Y0_ECOLI/4-167,(Q8FEL0_ECOL6/8-169,Q8ZMG4_SALTY/8-169)),(YGBJ_HAEIN/5-168,Q9CL76_PASMU/4-167)))),Q8VYC5_ARATH/323-486),Q92PN5_RHIME/4-165),Q84H84_9MICC/2-166),((((Q81DR6_BACCR/1-163,Q8ES28_OCEIH/1-163),Q86R98_DROME/49-209),(((3HIDH_RAT/38-200,Q6DC72_BRARE/32-194),Q83D20_COXBU/1-163),(Q889G7_PSESM/2-162,((((MMSB_MYCTU/3-160,Q73S63_MYCPA/4-163),((Q8U8G3_AGRT5/11-170,Q92TQ7_RHIME/1-160),((Q6N493_RHOPA/1-160,Q89N85_BRAJA/1-160),(Q8G003_BRUSU/1-161,Q98L30_RHILO/1-161)))),Q9A8J9_CAUCR/1-161),((Q87H47_VIBPA/1-163,((Q6LIA1_PHOPR/1-167,Q87II1_VIBPA/1-167),Q8D6N9_VIBVU/28-194)),((Q7NWA9_CHRVO/1-163,((Q7VYA3_BORPE/1-162,Q9I5I6_PSEAE/1-163),Q8PB60_XANCP/1-163)),MMSB_PSEAE/1-163)))))),(Q743I1_MYCPA/11-169,(Q7WNR3_BORBR/28-189,(Q7W4M1_BORPA/4-164,Q89UN2_BRAJA/54-214)))))),(Y229_SYNY3/3-167,Q82LI5_STRAW/13-175)),(Q83Q26_SHIFL/5-167,(((Q92TV9_RHIME/1-163,Q9I3L2_PSEAE/1-163),Q6LPW7_PHOPR/1-163),(Q82WJ8_NITEU/3-166,((Q89QG0_BRAJA/1-162,Q8XUA8_RALSO/4-172),Q98N82_RHILO/1-163))))),(((P84067_THETH/1-157,Q6FA14_ACIAD/2-158),(Q6UCZ9_9PROT/20-183,((((Q7W489_BORPA/14-178,Q9I3E1_PSEAE/1-164),(Q8EDH8_SHEON/1-164,(Q6N8D0_RHOPA/1-165,(Q92PA2_RHIME/1-165,(Q8G0Y2_BRUSU/3-167,Q98MJ7_RHILO/1-165))))),Q9KNF7_VIBCH/24-187),Q87G98_VIBPA/3-166))),((((Q949M8_ARATH/34-195,(Q8LQ70_ORYSA/19-182,Q9SZE1_ARATH/37-199)),Q7UTL3_RHOBA/7-171),((Q830A7_ENTFA/1-163,Q88UE9_LACPL/1-163),Q9CDK4_LACLA/1-163)),(((Q6HEC3_BACHK/5-167,(Q8XNE4_CLOPE/1-163,((Q8ESP3_OCEIH/6-168,YKWC_BACSU/2-164),Q97DX8_CLOAB/5-167))),Q73P00_TREDE/5-167),Q8Y8A5_LISMO/1-163)))),(((Q8ZU27_PYRAE/1-148,((Q8NKA4_ASPOR/10-190,((6PGD_TRYBB/2-178,Q95UN7_LEITR/2-178),((((6PGD_BACSU/2-173,Q8CX65_OCEIH/1-172),((Q7NLK6_GLOVI/16-188,((Q83G38_TROWT/2-173,((Q6A799_PROAC/8-180,Q826E4_STRAW/4-177),((O32911_MYCLE/13-185,(Q6NHC5_CORDI/7-179,Q8FTI1_COREF/13-185)),(Q6ADQ1_LEIXX/7-179,Q8G729_BIFLO/5-177)))),((Q8DLC0_SYNEL/3-175,(Q8YLM3_ANASP/3-175,6PGD_SYNY3/10-185)),(6PGD_SYNP7/3-175,Q7U767_SYNPX/3-175)))),(((6PGD2_BACSU/2-173,Q8CXN9_OCEIH/2-174),((6PGD_STAEP/2-174,Q81VN1_BACAN/3-174),(((6PGD_LACLC/3-176,Q88WS6_LACPL/5-178),Q836Q9_ENTFA/3-175),(((6PGD_BUCBP/3-174,(Q7VRX5_CANBF/4-176,Q6UA37_9ENTR/18-190)),(6PGD_BUCAI/3-174,6PGD_BUCAP/3-174)),(O66227_ECOLI/3-175,Q8Y7B0_LISMO/3-174))))),Q74H97_LACJO/1-172))),((((Q8RD52_THETN/1-173,Q9WYR9_THEMA/2-174),Q8R8Q4_THETN/1-173),((Q8SAQ6_CHLRE/3-178,(O22111_SOYBN/5-180,(Q8LG34_ARATH/6-180,Q94KU2_SPIOL/48-222))),(Q8IKT2_PLAF7/1-174,Q9SME1_9PHAE/6-179))),(((Q6MEF8_PARUW/5-177,(((6PGD_TREPA/2-175,(Q7UV82_RHOBA/4-179,Q8A8E5_BACTN/6-184)),Q8TA03_DICDI/5-179),((6PGD_HAEIN/4-177,Q83UJ4_NEIGO/2-175),((6PGD_SCHPO/6-179,(Q874Q3_ASPNG/6-178,((Q754E1_ASHGO/11-183,6PGD_CANAL/28-200),6PGD1_YEAST/2-174))),(((6PGD_SHEEP/2-175,6PGD_CERCA/4-176),(Q17761_CAEEL/3-175,Q7M451_ASCSS/5-177)),6PGD_CUNEL/5-178))))),(6PGD_CHLPN/2-174,(Q823H8_CHLCV/4-176,6PGD_CHLTR/4-176))),Q893F9_CLOTE/3-174))),(Q8SRX1_ENCCU/6-174,(Q8FXG6_BRUSU/3-176,(Q8UF73_AGRT5/3-176,Q98GH7_RHILO/3-176)))))),(O66788_AQUAE/1-164,(Q9CDN4_LACLA/1-167,Q9RU02_DEIRA/2-172)))),Q6BYY0_DEBHA/18-210),((((Q89GM2_BRAJA/8-170,Q98K09_RHILO/7-170),Q98I20_RHILO/4-164),Q7U3U8_SYNPX/5-167),Q9K9L1_BACHD/2-164))),(Q8RWF1_ARATH/51-213,(Q6P1Q2_HUMAN/198-360,Q8T079_DROME/317-478))),Q8TT25_METAC/9-171),(Q97C72_THEVO/4-161,Q9HLR4_THEAC/9-166)),Q8F4I7_LEPIN/4-163),Q82MW0_STRAW/4-163,Q9RD04_STRCO/4-163);
((((((((((((((((Q8U8K6_AGRT5/20-182:0.10112,Q930C6_RHIME/2-164:0.14944):0.59617,(Q8KL12_RHIET/6-167:0.47943,(Q8FBG0_ECOL6/68-231:0.20228,YIHU_SALTY/3-164:0.18438):0.40580):0.08513):0.10763,(((Q6F842_ACIAD/6-163:0.58118,Q9JTH7_NEIMA/6-164:0.79819):0.30542,(Q89HA0_BRAJA/23-186:0.44246,(Q7WAJ7_BORPA/2-163:0.45188,(Q88NR2_PSEPK/5-168:0.20626,Q9HYT2_PSEAE/5-171:0.21184):0.18816):0.08085):0.02838):0.12072,(Q8UB58_AGRT5/11-172:0.55342,((Q8UBW3_AGRT5/9-169:0.27517,Q930R8_RHIME/4-164:0.16658):0.11056,Q9ZNH7_9GAMM/3-163:0.39781):0.09796):0.10246):0.15053):0.05007,(Q7WCG3_BORPA/4-170:0.56116,Q7WPN1_BORBR/137-302:0.53351):0.15824):0.06339,(Q89RT2_BRAJA/5-167:0.79997,Q8XWP4_RALSO/1-167:0.47756):0.13489):0.04720,(Q7VYY0_BORPE/2-172:0.64579,Q8ZAY4_YERPE/4-168:0.60582):0.13333):0.11259,((((((Q87V80_PSESM/3-165:0.52848,(Q89R44_BRAJA/8-170:0.24056,Q92TW9_RHIME/2-164:0.20780):0.20473):0.07489,(Q7N447_PHOLL/5-169:0.44047,((Q849Y0_ECOLI/4-167:0.22590,(Q8FEL0_ECOL6/8-169:0.17692,Q8ZMG4_SALTY/8-169:0.14626):0.06287):0.08707,(YGBJ_HAEIN/5-168:0.16483,Q9CL76_PASMU/4-167:0.08674):0.14558):0.18953):0.27891):0.07589,Q8VYC5_ARATH/323-486:0.59160):0.21549,Q92PN5_RHIME/4-165:0.61881):0.04129,Q84H84_9MICC/2-166:0.67910):0.17389,((((Q81DR6_BACCR/1-163:0.30251,Q8ES28_OCEIH/1-163:0.30843):0.34147,Q86R98_DROME/49-209:0.49579):0.13851,(((3HIDH_RAT/38-200:0.13071,Q6DC72_BRARE/32-194:0.19358):0.37546,Q83D20_COXBU/1-163:0.41127):0.10191,(Q889G7_PSESM/2-162:0.44902,((((MMSB_MYCTU/3-160:0.15352,Q73S63_MYCPA/4-163:0.15872):0.30401,((Q8U8G3_AGRT5/11-170:0.28278,Q92TQ7_RHIME/1-160:0.22007):0.09116,((Q6N493_RHOPA/1-160:0.13426,Q89N85_BRAJA/1-160:0.16272):0.15784,(Q8G003_BRUSU/1-161:0.14923,Q98L30_RHILO/1-161:0.14291):0.10086):0.07138):0.05474):0.05908,Q9A8J9_CAUCR/1-161:0.41927):0.14747,((Q87H47_VIBPA/1-163:0.22391,((Q6LIA1_PHOPR/1-167:0.10142,Q87II1_VIBPA/1-167:0.17663):0.16356,Q8D6N9_VIBVU/28-194:0.19641):0.15443):0.07545,((Q7NWA9_CHRVO/1-163:0.23348,((Q7VYA3_BORPE/1-162:0.18499,Q9I5I6_PSEAE/1-163:0.20928):0.02168,Q8PB60_XANCP/1-163:0.18948):0.08994):0.08488,MMSB_PSEAE/1-163:0.21684):0.14203):0.04562):0.06592):0.13002):0.07518):0.04578,(Q743I1_MYCPA/11-169:0.72464,(Q7WNR3_BORBR/28-189:0.48539,(Q7W4M1_BORPA/4-164:0.42351,Q89UN2_BRAJA/54-214:0.42338):0.16488):0.19714):0.14538):0.03220):0.04336):0.05446,(Y229_SYNY3/3-167:0.59060,Q82LI5_STRAW/13-175:0.43603):0.13801):0.08522,(Q83Q26_SHIFL/5-167:0.43296,(((Q92TV9_RHIME/1-163:0.32287,Q9I3L2_PSEAE/1-163:0.27025):0.05542,Q6LPW7_PHOPR/1-163:0.22355):0.07149,(Q82WJ8_NITEU/3-166:0.43445,((Q89QG0_BRAJA/1-162:0.22225,Q8XUA8_RALSO/4-172:0.28629):0.12124,Q98N82_RHILO/1-163:0.21894):0.06790):0.05125):0.29445):0.09333):0.06783,(((P84067_THETH/1-157:0.35317,Q6FA14_ACIAD/2-158:0.43815):0.40645,(Q6UCZ9_9PROT/20-183:0.54674,((((Q7W489_BORPA/14-178:0.20720,Q9I3E1_PSEAE/1-164:0.35459):0.07760,(Q8EDH8_SHEON/1-164:0.33617,(Q6N8D0_RHOPA/1-165:0.17429,(Q92PA2_RHIME/1-165:0.10270,(Q8G0Y2_BRUSU/3-167:0.16084,Q98MJ7_RHILO/1-165:0.18544):0.04670):0.07907):0.08520):0.02626):0.11134,Q9KNF7_VIBCH/24-187:0.37205):0.08321,Q87G98_VIBPA/3-166:0.27700):0.14092):0.06413):0.11869,((((Q949M8_ARATH/34-195:0.48464,(Q8LQ70_ORYSA/19-182:0.34523,Q9SZE1_ARATH/37-199:0.24745):0.02718):0.19310,Q7UTL3_RHOBA/7-171:0.30063):0.15471,((Q830A7_ENTFA/1-163:0.27852,Q88UE9_LACPL/1-163:0.29769):0.10095,Q9CDK4_LACLA/1-163:0.31053):0.10787):0.08022,(((Q6HEC3_BACHK/5-167:0.38142,(Q8XNE4_CLOPE/1-163:0.41523,((Q8ESP3_OCEIH/6-168:0.38337,YKWC_BACSU/2-164:0.15574):0.06825,Q97DX8_CLOAB/5-167:0.26134):0.06530):0.03497):0.06543,Q73P00_TREDE/5-167:0.49127):0.05632,Q8Y8A5_LISMO/1-163:0.32862):0.05771):0.17443):0.10780):0.05857,(((Q8ZU27_PYRAE/1-148:1.35872,((Q8NKA4_ASPOR/10-190:0.84544,((6PGD_TRYBB/2-178:0.14216,Q95UN7_LEITR/2-178:0.10751):0.48992,((((6PGD_BACSU/2-173:0.19947,Q8CX65_OCEIH/1-172:0.33360):0.16723,((Q7NLK6_GLOVI/16-188:0.25693,((Q83G38_TROWT/2-173:0.46624,((Q6A799_PROAC/8-180:0.35543,Q826E4_STRAW/4-177:0.16278):0.08457,((O32911_MYCLE/13-185:0.19212,(Q6NHC5_CORDI/7-179:0.12926,Q8FTI1_COREF/13-185:0.10022):0.09215):0.08176,(Q6ADQ1_LEIXX/7-179:0.22866,Q8G729_BIFLO/5-177:0.14473):0.12071):0.06297):0.05726):0.19501,((Q8DLC0_SYNEL/3-175:0.15562,(Q8YLM3_ANASP/3-175:0.17450,6PGD_SYNY3/10-185:0.17304):0.05377):0.05099,(6PGD_SYNP7/3-175:0.07879,Q7U767_SYNPX/3-175:0.37458):0.06341):0.09894):0.04606):0.10502,(((6PGD2_BACSU/2-173:0.08505,Q8CXN9_OCEIH/2-174:0.16863):0.02645,((6PGD_STAEP/2-174:0.20300,Q81VN1_BACAN/3-174:0.26617):0.03661,(((6PGD_LACLC/3-176:0.17991,Q88WS6_LACPL/5-178:0.21289):0.04889,Q836Q9_ENTFA/3-175:0.06483):0.07055,(((6PGD_BUCBP/3-174:0.24270,(Q7VRX5_CANBF/4-176:0.35357,Q6UA37_9ENTR/18-190:0.20961):0.08598):0.04091,(6PGD_BUCAI/3-174:0.12890,6PGD_BUCAP/3-174:0.11691):0.10609):0.13104,(O66227_ECOLI/3-175:0.09942,Q8Y7B0_LISMO/3-174:0.17384):0.05553):0.05053):0.04264):0.03776):0.14978,Q74H97_LACJO/1-172:0.32323):0.05753):0.08530):0.06439,((((Q8RD52_THETN/1-173:0.24740,Q9WYR9_THEMA/2-174:0.14633):0.06463,Q8R8Q4_THETN/1-173:0.10812):0.09167,((Q8SAQ6_CHLRE/3-178:0.28043,(O22111_SOYBN/5-180:0.14570,(Q8LG34_ARATH/6-180:0.08824,Q94KU2_SPIOL/48-222:0.18550):0.11011):0.09189):0.08601,(Q8IKT2_PLAF7/1-174:0.31330,Q9SME1_9PHAE/6-179:0.40240):0.05608):0.19401):0.04836,(((Q6MEF8_PARUW/5-177:0.14810,(((6PGD_TREPA/2-175:0.29413,(Q7UV82_RHOBA/4-179:0.24887,Q8A8E5_BACTN/6-184:0.31316):0.08309):0.07310,Q8TA03_DICDI/5-179:0.16575):0.08491,((6PGD_HAEIN/4-177:0.03707,Q83UJ4_NEIGO/2-175:0.21038):0.15048,((6PGD_SCHPO/6-179:0.16155,(Q874Q3_ASPNG/6-178:0.09505,((Q754E1_ASHGO/11-183:0.16216,6PGD_CANAL/28-200:0.09113):0.05599,6PGD1_YEAST/2-174:0.11690):0.04054):0.04231):0.04976,(((6PGD_SHEEP/2-175:0.11255,6PGD_CERCA/4-176:0.21987):0.06064,(Q17761_CAEEL/3-175:0.20138,Q7M451_ASCSS/5-177:0.13097):0.02523):0.04900,6PGD_CUNEL/5-178:0.10583):0.04951):0.07523):0.05550):0.00828):0.14921,(6PGD_CHLPN/2-174:0.12384,(Q823H8_CHLCV/4-176:0.07821,6PGD_CHLTR/4-176:0.22949):0.07408):0.13596):0.11744,Q893F9_CLOTE/3-174:0.38032):0.09271):0.07586):0.03377,(Q8SRX1_ENCCU/6-174:0.52501,(Q8FXG6_BRUSU/3-176:0.37743,(Q8UF73_AGRT5/3-176:0.15598,Q98GH7_RHILO/3-176:0.19298):0.15703):0.16070):0.15538):0.04910):0.12500):0.12471,(O66788_AQUAE/1-164:0.70101,(Q9CDN4_LACLA/1-167:0.49877,Q9RU02_DEIRA/2-172:0.61753):0.17800):0.09595):0.24242):0.08650,Q6BYY0_DEBHA/18-210:1.04213):0.27351,((((Q89GM2_BRAJA/8-170:0.52401,Q98K09_RHILO/7-170:0.39957):0.27752,Q98I20_RHILO/4-164:0.84714):0.15925,Q7U3U8_SYNPX/5-167:0.80424):0.02125,Q9K9L1_BACHD/2-164:0.60726):0.05771):0.06941):0.25279,(Q8RWF1_ARATH/51-213:0.41909,(Q6P1Q2_HUMAN/198-360:0.29193,Q8T079_DROME/317-478:0.50067):0.25339):0.24398):0.06275,Q8TT25_METAC/9-171:0.57082):0.14895,(Q97C72_THEVO/4-161:0.40068,Q9HLR4_THEAC/9-166:0.21116):0.54940):0.11504,Q8F4I7_LEPIN/4-163:0.90593):0.59189,Q82MW0_STRAW/4-163:0.12938,Q9RD04_STRCO/4-163:0.12947);