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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF03413 phylogeny |
| (((((((((((((((Q8PSA7_METMA/64-121,Q8TLV5_METAC/114-171),(Q8RBF9_THETN/31-94,Q8RBF9_THETN/109-184)),(((((((((Q46237_CLOPE/161-230,((Q97G51_CLOAB/153-222,Q97G52_CLOAB/161-230),Q97GS5_CLOAB/161-230)),((PROA_LEGPN/131-202,PROA_LEGLO/128-199),(Q814S1_BACCR/148-221,Q87I51_VIBPA/130-204))),(((NPRE_BACSU/139-216,NPRE_BACAM/139-216),(Q81PS1_BACAN/148-220,Q81B13_BACCR/145-217)),(PRO1_LISMO/121-195,((SEPA_STAEP/128-202,AURE_STAAU/129-203),Q9L7Z4_9STAP/122-196)))),(((Q8ESH1_OCEIH/143-217,NPRB_BACSU/144-218),Q81XF5_BACAN/146-219),((NPRE_BACBR/144-218,(NPRE_PAEPO/214-283,((Q8VLQ5_ALTSO/125-198,(((Q8GCX0_CHRVO/118-188,(Q9LCJ5_AERPU/112-178,Q9RMM8_AERHY/112-178)),ELAS_PSEAE/122-192),(O06694_VIBVU/115-191,((EMPA_VIBAN/116-194,NPRV_VIBPR/115-191),(HAPT_VIBCH/115-190,Q8RR31_VIBFL/117-195))))),(Q8RTZ9_9GAMM/126-201,Q9KH34_9GAMM/126-201)))),((THER_BACTH/144-219,(THER_BACST/141-216,NPRE_BACCL/137-212)),(O32309_BACTU/150-220,NPRM_BACME/152-222))))),(((Q8KI26_ENTFA/35-92,Q8D7W4_VIBVU/115-176),(((Q898Z6_CLOTE/221-288,Q97F57_CLOAB/222-288),(Q813I5_BACCR/291-358,YPEB_BACHD/290-357)),Q8U1R9_PYRFU/567-621)),((((YPEB_BACHD/219-281,(YPEB_BACSU/219-282,Q813I5_BACCR/218-282)),(Q8R774_THETN/217-278,Q8RBF9_THETN/290-362)),(Q8YA69_LISMO/189-260,(((Q898Z6_CLOTE/382-443,Q97F57_CLOAB/382-443),Q8R774_THETN/371-432),(YPEB_BACSU/377-438,(YPEB_OCEIH/373-434,(Q813I5_BACCR/375-436,YPEB_BACHD/374-435)))))),(((YPMB_BACSU/99-159,((Q831X2_ENTFA/109-169,Q9KC80_BACHD/94-154),Q8Y605_LISMO/131-191)),(Q81SS8_BACAN/94-163,YPEB_OCEIH/218-280)),(((Q8EYP9_LEPIN/155-250,Q8EYQ2_LEPIN/143-238),Q8F0M6_LEPIN/159-252),Q81R73_BACAN/122-193))))),((((Q8ESM9_OCEIH/119-177,(O35012_BACSU/108-167,Q8ESN0_OCEIH/143-201)),(((Q81R44_BACAN/227-286,O34551_BACSU/98-153),(Q8RD03_THETN/115-173,(Q8ESN0_OCEIH/32-90,Q99WK5_STAAM/129-187))),((Q88WS8_LACPL/132-191,Q82ZK1_ENTFA/146-205),(Q9KFU6_BACHD/130-191,Q9KFU7_BACHD/111-170)))),(((Q8R5Y9_FUSNN/24-83,((((Q8DWU2_STRA5/153-213,Q99WK5_STAAM/52-111),((Q82ZK1_ENTFA/63-122,Q88WS8_LACPL/51-110),(Q8YAR7_LISMO/59-118,(Q8ERG4_OCEIH/56-114,Q8L0X6_LACHE/59-118)))),Q8ERG4_OCEIH/132-194),((Q8R5X9_FUSNN/10-69,Q8R5Y9_FUSNN/99-158),(Q8DWU2_STRA5/78-137,Q8R5X9_FUSNN/83-142)))),(((Q81R44_BACAN/33-88,Q8ESM9_OCEIH/39-97),Q8YAR7_LISMO/142-200),Q8L0X6_LACHE/137-193)),O34551_BACSU/33-89)),((O35012_BACSU/41-99,(((Q81R43_BACAN/43-101,Q8U1R9_PYRFU/327-383),Q9KFU6_BACHD/49-108),Q8ELD0_OCEIH/32-90)),(Q8E0L6_STRA5/31-94,((Q8PWA1_METMA/143-204,(Q8PWA1_METMA/60-123,Q8TTA4_METAC/55-118)),(Q8E690_STRA3/117-182,(Q879H9_STRP3/81-144,Q8DVN1_STRMU/57-120))))))),((((Q812S7_BACCR/419-486,Q81LP4_BACAN/430-497),Q8RBF9_THETN/198-252),Q8RBF9_THETN/464-522),(((Q8CS45_STAEP/42-111,Q8NW28_STAAW/32-101),(Q8EP78_OCEIH/29-101,((((Q82ZL5_ENTFA/37-109,Q88WZ8_LACPL/33-105),Q8Y6S1_LISMO/29-101),O32065_BACSU/28-100),(Q816W8_BACCR/29-101,Q9K7V1_BACHD/28-100)))),(Q47786_ENTFA/119-186,Q8L2E8_VIBHA/118-185)))),(Q8DP25_STRR6/106-160,((Q81R44_BACAN/99-158,Q81R44_BACAN/163-222),Q81BG2_BACCR/41-107))),O34551_BACSU/164-223)),(O26530_METTH/69-131,O27358_METTH/81-143)),(Q8UJH3_AGRT5/92-151,Q8E909_SHEON/27-86)),(Q8E8L7_SHEON/45-99,(Q82US0_NITEU/41-96,YCDB_BACSU/416-471))),(Q8FUC0_COREF/86-161,Q8NU49_CORGL/68-151)),(((Q8FUC0_COREF/177-228,Q8NU49_CORGL/167-220),(Q9JSM6_NEIMA/65-123,Q8KFX7_CHLTE/45-103)),((((((Q87ZP2_PSESM/39-99,Q88KE4_PSEPK/41-101),Q9I0I0_PSEAE/41-101),((Q9I0H9_PSEAE/39-99,(Q88KE5_PSEPK/39-99,Q87ZP1_PSESM/39-99)),Q886H0_PSESM/38-99)),Q9A8Q0_CAUCR/73-133),(Q988S6_RHILO/46-105,Q9A4R3_CAUCR/50-105)),((Q9L126_STRCO/81-167,Q9L2B8_STRCO/168-232),(Q9L2B8_STRCO/83-152,(Q82P05_STRAW/125-192,Q9L126_STRCO/188-249)))))),((((Q82BN5_STRAW/115-187,Q9L2E5_STRCO/131-203),(((Q83WH1_STRGR/164-228,Q82BS4_STRAW/153-218),(Q82P96_STRAW/184-258,((Q82JG0_STRAW/146-220,Q9L1F9_STRCO/142-216),Q9L1F8_STRCO/155-229))),Q8PQ63_XANAC/120-190)),Q8CK35_STRCO/128-197),(O26402_METTH/29-126,(Q89EP6_BRAJA/242-300,Q89L62_BRAJA/85-144)))),(((((P72122_PSEAE/298-357,Q8P606_XANCP/359-418),Q87VQ2_PSESM/285-344),Q88DI6_PSEPK/284-343),((Q8ELE8_OCEIH/178-237,Q9KBS1_BACHD/272-331),(Q8NWQ0_STAAW/269-336,Q9KE75_BACHD/288-347))),((((Q9A7E1_CAUCR/252-316,(Q825U8_STRAW/286-346,Q93J57_STRCO/330-390)),Q8A623_BACTN/26-84),(Q884E8_PSESM/67-126,(Q9I178_PSEAE/60-119,(Q88GC7_PSEPK/63-122,Q8G8F6_PSEAE/60-119)))),(((((Q87VQ2_PSESM/60-118,P72122_PSEAE/65-121),Q88DI6_PSEPK/60-118),(Q9KBS1_BACHD/60-118,(Q8UDX1_AGRT5/75-132,Q9KE75_BACHD/74-132))),(Q8P606_XANCP/82-140,Q8PHC6_XANAC/73-131)),(Q8NN80_CORGL/84-145,((Q825U8_STRAW/84-147,Q93J57_STRCO/113-176),((Q87FZ6_VIBPA/71-130,(Q8D450_VIBVU/70-129,Q9KL57_VIBCH/70-129)),Q9RCU8_STRCO/100-162))))))),(Q82WV7_NITEU/279-343,Q884E8_PSESM/260-320)),Q9A2Q5_CAUCR/61-125),Q82ND7_STRAW/171-257),Q8PEF5_XANCP/27-82),Q8PEF5_XANCP/86-141,Q8PRD6_XANAC/91-145); |
| (((((((((((((((Q8PSA7_METMA/64-121:0.15695,Q8TLV5_METAC/114-171:0.16402):0.42187,(Q8RBF9_THETN/31-94:0.41097,Q8RBF9_THETN/109-184:0.84780):0.30187):0.25751,(((((((((Q46237_CLOPE/161-230:0.41227,((Q97G51_CLOAB/153-222:0.19312,Q97G52_CLOAB/161-230:0.17004):0.14165,Q97GS5_CLOAB/161-230:0.37091):0.08577):0.15083,((PROA_LEGPN/131-202:0.29976,PROA_LEGLO/128-199:0.03926):0.53126,(Q814S1_BACCR/148-221:0.59887,Q87I51_VIBPA/130-204:0.84176):0.08580):0.23934):0.06792,(((NPRE_BACSU/139-216:0.16072,NPRE_BACAM/139-216:0.18490):0.36960,(Q81PS1_BACAN/148-220:0.36230,Q81B13_BACCR/145-217:0.15378):0.41702):0.09274,(PRO1_LISMO/121-195:0.46930,((SEPA_STAEP/128-202:0.22637,AURE_STAAU/129-203:0.18011):0.13495,Q9L7Z4_9STAP/122-196:0.18540):0.22765):0.07300):0.15185):0.10409,(((Q8ESH1_OCEIH/143-217:0.35870,NPRB_BACSU/144-218:0.33885):0.05896,Q81XF5_BACAN/146-219:0.28727):0.09686,((NPRE_BACBR/144-218:0.37276,(NPRE_PAEPO/214-283:0.53793,((Q8VLQ5_ALTSO/125-198:0.20129,(((Q8GCX0_CHRVO/118-188:0.16869,(Q9LCJ5_AERPU/112-178:0.03292,Q9RMM8_AERHY/112-178:0.19947):0.42387):0.06223,ELAS_PSEAE/122-192:0.20143):0.11598,(O06694_VIBVU/115-191:0.29705,((EMPA_VIBAN/116-194:0.21186,NPRV_VIBPR/115-191:0.24723):0.08918,(HAPT_VIBCH/115-190:0.26876,Q8RR31_VIBFL/117-195:0.22662):0.10117):0.13575):0.20708):0.27667):0.19690,(Q8RTZ9_9GAMM/126-201:0.13142,Q9KH34_9GAMM/126-201:0.28563):0.08213):0.46940):0.15682):0.08194,((THER_BACTH/144-219:0.14798,(THER_BACST/141-216:0.23945,NPRE_BACCL/137-212:0.16962):0.29263):0.31399,(O32309_BACTU/150-220:0.17172,NPRM_BACME/152-222:0.28299):0.13757):0.08577):0.15380):0.13468):0.11191,(((Q8KI26_ENTFA/35-92:0.60810,Q8D7W4_VIBVU/115-176:0.64955):0.11496,(((Q898Z6_CLOTE/221-288:0.37369,Q97F57_CLOAB/222-288:0.39914):0.13015,(Q813I5_BACCR/291-358:0.25050,YPEB_BACHD/290-357:0.36446):0.44462):0.21437,Q8U1R9_PYRFU/567-621:0.50755):0.05664):0.18111,((((YPEB_BACHD/219-281:0.29421,(YPEB_BACSU/219-282:0.49731,Q813I5_BACCR/218-282:0.33042):0.14146):0.11881,(Q8R774_THETN/217-278:0.76773,Q8RBF9_THETN/290-362:0.72739):0.25123):0.17761,(Q8YA69_LISMO/189-260:0.68854,(((Q898Z6_CLOTE/382-443:0.17679,Q97F57_CLOAB/382-443:0.36122):0.19412,Q8R774_THETN/371-432:0.23611):0.17322,(YPEB_BACSU/377-438:0.28569,(YPEB_OCEIH/373-434:0.24370,(Q813I5_BACCR/375-436:0.32032,YPEB_BACHD/374-435:0.25260):0.13088):0.06145):0.12703):0.17288):0.19572):0.12043,(((YPMB_BACSU/99-159:0.42328,((Q831X2_ENTFA/109-169:0.49663,Q9KC80_BACHD/94-154:0.45345):0.16060,Q8Y605_LISMO/131-191:0.36247):0.20380):0.13115,(Q81SS8_BACAN/94-163:0.38262,YPEB_OCEIH/218-280:0.51786):0.11491):0.12171,(((Q8EYP9_LEPIN/155-250:0.18734,Q8EYQ2_LEPIN/143-238:0.12286):0.10450,Q8F0M6_LEPIN/159-252:0.23469):0.47487,Q81R73_BACAN/122-193:0.41650):0.24071):0.03644):0.05890):0.04549):0.07584,((((Q8ESM9_OCEIH/119-177:0.13859,(O35012_BACSU/108-167:0.40754,Q8ESN0_OCEIH/143-201:0.25698):0.07797):0.08800,(((Q81R44_BACAN/227-286:0.37121,O34551_BACSU/98-153:0.60487):0.17090,(Q8RD03_THETN/115-173:0.50585,(Q8ESN0_OCEIH/32-90:0.53131,Q99WK5_STAAM/129-187:0.36374):0.10544):0.09191):0.05931,((Q88WS8_LACPL/132-191:0.39867,Q82ZK1_ENTFA/146-205:0.40882):0.25721,(Q9KFU6_BACHD/130-191:0.25828,Q9KFU7_BACHD/111-170:0.42384):0.14113):0.02191):0.04110):0.11233,(((Q8R5Y9_FUSNN/24-83:0.25937,((((Q8DWU2_STRA5/153-213:0.53377,Q99WK5_STAAM/52-111:0.47340):0.13342,((Q82ZK1_ENTFA/63-122:0.29524,Q88WS8_LACPL/51-110:0.52272):0.10746,(Q8YAR7_LISMO/59-118:0.38096,(Q8ERG4_OCEIH/56-114:0.34019,Q8L0X6_LACHE/59-118:0.53490):0.15317):0.06579):0.06168):0.02955,Q8ERG4_OCEIH/132-194:0.67543):0.09462,((Q8R5X9_FUSNN/10-69:0.29317,Q8R5Y9_FUSNN/99-158:0.33004):0.05262,(Q8DWU2_STRA5/78-137:0.42737,Q8R5X9_FUSNN/83-142:0.36820):0.02911):0.06403):0.03549):0.08094,(((Q81R44_BACAN/33-88:0.37835,Q8ESM9_OCEIH/39-97:0.31598):0.11004,Q8YAR7_LISMO/142-200:0.48220):0.05731,Q8L0X6_LACHE/137-193:0.46938):0.07572):0.03110,O34551_BACSU/33-89:0.93902):0.05441):0.07548,((O35012_BACSU/41-99:0.47814,(((Q81R43_BACAN/43-101:0.34355,Q8U1R9_PYRFU/327-383:0.60418):0.10847,Q9KFU6_BACHD/49-108:0.42938):0.05401,Q8ELD0_OCEIH/32-90:0.44775):0.03126):0.07525,(Q8E0L6_STRA5/31-94:0.54885,((Q8PWA1_METMA/143-204:0.51162,(Q8PWA1_METMA/60-123:0.24444,Q8TTA4_METAC/55-118:0.05041):0.21227):0.13028,(Q8E690_STRA3/117-182:0.32071,(Q879H9_STRP3/81-144:0.28481,Q8DVN1_STRMU/57-120:0.34359):0.03646):0.03805):0.02386):0.11845):0.01413):0.10067):0.07909,((((Q812S7_BACCR/419-486:0.15211,Q81LP4_BACAN/430-497:0.08609):0.42576,Q8RBF9_THETN/198-252:0.39112):0.10752,Q8RBF9_THETN/464-522:0.64877):0.18441,(((Q8CS45_STAEP/42-111:0.34599,Q8NW28_STAAW/32-101:0.16897):0.27521,(Q8EP78_OCEIH/29-101:0.17801,((((Q82ZL5_ENTFA/37-109:0.19711,Q88WZ8_LACPL/33-105:0.39039):0.08009,Q8Y6S1_LISMO/29-101:0.20338):0.20186,O32065_BACSU/28-100:0.48030):0.13503,(Q816W8_BACCR/29-101:0.22468,Q9K7V1_BACHD/28-100:0.34534):0.07296):0.09402):0.23438):0.18263,(Q47786_ENTFA/119-186:0.50746,Q8L2E8_VIBHA/118-185:0.67225):0.25777):0.08992):0.06100):0.10215,(Q8DP25_STRR6/106-160:0.67904,((Q81R44_BACAN/99-158:0.35472,Q81R44_BACAN/163-222:0.37930):0.20517,Q81BG2_BACCR/41-107:0.61615):0.09608):0.09062):0.16485,O34551_BACSU/164-223:0.55734):0.10496):0.08544,(O26530_METTH/69-131:0.57823,O27358_METTH/81-143:0.46178):0.25030):0.10463,(Q8UJH3_AGRT5/92-151:0.58389,Q8E909_SHEON/27-86:0.46249):0.16789):0.15833,(Q8E8L7_SHEON/45-99:0.46885,(Q82US0_NITEU/41-96:0.45752,YCDB_BACSU/416-471:0.53552):0.06504):0.25051):0.21598,(Q8FUC0_COREF/86-161:0.35573,Q8NU49_CORGL/68-151:0.49353):0.38770):0.05242,(((Q8FUC0_COREF/177-228:0.22753,Q8NU49_CORGL/167-220:0.39038):0.32078,(Q9JSM6_NEIMA/65-123:0.38029,Q8KFX7_CHLTE/45-103:0.55375):0.07678):0.12660,((((((Q87ZP2_PSESM/39-99:0.23353,Q88KE4_PSEPK/41-101:0.13477):0.03931,Q9I0I0_PSEAE/41-101:0.19529):0.11698,((Q9I0H9_PSEAE/39-99:0.10803,(Q88KE5_PSEPK/39-99:0.15980,Q87ZP1_PSESM/39-99:0.39678):0.07812):0.05583,Q886H0_PSESM/38-99:0.47023):0.11782):0.15019,Q9A8Q0_CAUCR/73-133:0.43831):0.12335,(Q988S6_RHILO/46-105:0.38172,Q9A4R3_CAUCR/50-105:0.41130):0.13959):0.07363,((Q9L126_STRCO/81-167:0.41828,Q9L2B8_STRCO/168-232:0.39679):0.04178,(Q9L2B8_STRCO/83-152:0.13062,(Q82P05_STRAW/125-192:0.42409,Q9L126_STRCO/188-249:0.27863):0.18691):0.12549):0.07445):0.03900):0.04746):0.02311,((((Q82BN5_STRAW/115-187:0.12572,Q9L2E5_STRCO/131-203:0.11350):0.41968,(((Q83WH1_STRGR/164-228:0.13858,Q82BS4_STRAW/153-218:0.24985):0.10984,(Q82P96_STRAW/184-258:0.25641,((Q82JG0_STRAW/146-220:0.09629,Q9L1F9_STRCO/142-216:0.10646):0.05706,Q9L1F8_STRCO/155-229:0.07396):0.04535):0.02837):0.15671,Q8PQ63_XANAC/120-190:0.72407):0.13888):0.11411,Q8CK35_STRCO/128-197:0.44798):0.12388,(O26402_METTH/29-126:0.80452,(Q89EP6_BRAJA/242-300:0.43841,Q89L62_BRAJA/85-144:0.18321):0.12601):0.22292):0.07797):0.07935,(((((P72122_PSEAE/298-357:0.14920,Q8P606_XANCP/359-418:0.51015):0.10098,Q87VQ2_PSESM/285-344:0.15798):0.04903,Q88DI6_PSEPK/284-343:0.12579):0.06936,((Q8ELE8_OCEIH/178-237:0.23360,Q9KBS1_BACHD/272-331:0.26614):0.10933,(Q8NWQ0_STAAW/269-336:0.78741,Q9KE75_BACHD/288-347:0.34132):0.11632):0.31636):0.43773,((((Q9A7E1_CAUCR/252-316:0.51406,(Q825U8_STRAW/286-346:0.21278,Q93J57_STRCO/330-390:0.28708):0.23722):0.12645,Q8A623_BACTN/26-84:0.85402):0.04418,(Q884E8_PSESM/67-126:0.30744,(Q9I178_PSEAE/60-119:0.12752,(Q88GC7_PSEPK/63-122:0.36393,Q8G8F6_PSEAE/60-119:0.16613):0.04005):0.17858):0.19546):0.07189,(((((Q87VQ2_PSESM/60-118:0.37506,P72122_PSEAE/65-121:0.16498):0.05498,Q88DI6_PSEPK/60-118:0.22480):0.26439,(Q9KBS1_BACHD/60-118:0.64702,(Q8UDX1_AGRT5/75-132:0.39976,Q9KE75_BACHD/74-132:0.50391):0.09559):0.17652):0.04095,(Q8P606_XANCP/82-140:0.18525,Q8PHC6_XANAC/73-131:0.22283):0.29749):0.07127,(Q8NN80_CORGL/84-145:0.53758,((Q825U8_STRAW/84-147:0.17997,Q93J57_STRCO/113-176:0.20653):0.09866,((Q87FZ6_VIBPA/71-130:0.34955,(Q8D450_VIBVU/70-129:0.20014,Q9KL57_VIBCH/70-129:0.32244):0.03824):0.39582,Q9RCU8_STRCO/100-162:0.39710):0.04983):0.00714):0.15444):0.04254):0.03350):0.08578):0.05677,(Q82WV7_NITEU/279-343:0.52710,Q884E8_PSESM/260-320:0.45771):0.26632):0.08046,Q9A2Q5_CAUCR/61-125:0.49247):0.17785,Q82ND7_STRAW/171-257:0.37548):0.27341,Q8PEF5_XANCP/27-82:0.25244):0.28266,Q8PEF5_XANCP/86-141:0.12590,Q8PRD6_XANAC/91-145:0.08664); 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