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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03412 phylogeny
for restricted amino acid alignment


 
((((((((RT1B_ACTPL/4-130,HLYB_PASSP/5-131),(CYAB_BORPE/5-133,P74829_9SPHN/25-147)),SUNT_BPSPC/10-143),(Y1463_METTH/16-142,O27690_METTH/67-193)),(((((Q9ZEG6_9LACT/6-140,(((P71471_LACPL/7-141,Q48868_LACSK/9-143),Q48872_LACSK/8-142),((PEDD_PEDAC/11-145,Q9ZI23_STRSL/7-141),COMA_STRPN/9-143))),MESD_LEUME/14-148),((Q46317_CARPI/7-139,(Q46599_9LACT/5-137,Q9X478_ENTFC/8-140)),O85760_9LIST/7-139)),(O54354_ANASP/339-465,P74652_SYNY3/24-154)),((CVAB_ECOLI/24-150,Q46973_ECOLI/27-153),Q9RJD7_STRCO/33-163))),((((Q9ZAB2_STRMU/4-134,LCN3_LACLA/4-135),O31053_STRPY/4-134),(O87239_9LACT/7-134,Q9S4D0_STAAU/15-142)),(Q9RC21_BACSY/8-137,Q57403_9ZZZZ/7-133))),O53037_HAEIN/41-169),Y390_MYCPN/4-131,Y390_MYCGE/4-131);
((((((((RT1B_ACTPL/4-130:0.33224,HLYB_PASSP/5-131:0.10711):0.87387,(CYAB_BORPE/5-133:0.56138,P74829_9SPHN/25-147:1.01948):0.24234):0.71645,SUNT_BPSPC/10-143:0.95044):0.03512,(Y1463_METTH/16-142:0.38070,O27690_METTH/67-193:0.42345):0.54170):0.26487,(((((Q9ZEG6_9LACT/6-140:0.54789,(((P71471_LACPL/7-141:0.22622,Q48868_LACSK/9-143:0.13029):0.04788,Q48872_LACSK/8-142:0.11451):0.08290,((PEDD_PEDAC/11-145:0.48626,Q9ZI23_STRSL/7-141:0.30415):0.08670,COMA_STRPN/9-143:0.35019):0.06795):0.07056):0.02662,MESD_LEUME/14-148:0.25445):0.18354,((Q46317_CARPI/7-139:0.19921,(Q46599_9LACT/5-137:0.18167,Q9X478_ENTFC/8-140:0.19757):0.13487):0.21068,O85760_9LIST/7-139:0.37635):0.17447):0.31341,(O54354_ANASP/339-465:0.58427,P74652_SYNY3/24-154:0.68755):0.07229):0.17950,((CVAB_ECOLI/24-150:0.18122,Q46973_ECOLI/27-153:0.16794):0.62121,Q9RJD7_STRCO/33-163:0.64536):0.15405):0.14300):0.35120,((((Q9ZAB2_STRMU/4-134:0.51796,LCN3_LACLA/4-135:0.35468):0.18990,O31053_STRPY/4-134:0.49066):0.25710,(O87239_9LACT/7-134:0.33349,Q9S4D0_STAAU/15-142:0.55082):0.47292):0.08518,(Q9RC21_BACSY/8-137:0.65263,Q57403_9ZZZZ/7-133:0.63952):0.09384):0.17132):0.35373,O53037_HAEIN/41-169:1.05275):0.97630,Y390_MYCPN/4-131:0.27523,Y390_MYCGE/4-131:0.05264);