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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03412 alignment
(34 sequences with 144 aa)


P74829_9SPHN/25-147 ----ELR.ESGLVALSLLLGVHNIAVTPEQLRHMLG..HAEGASVDDLILLAKRQQGVRAKAVDVPRG.------GLARQPLPAIADGPEGWFVIGGLT....-EHGVIIQRP--GHAPEQVDREGLDALWSGtLVLLTTRAVA
CYAB_BORPE/5-133 VAQCASVpDSGLLCLVMLARYHGLAADPEQLRHEFA..--EQAFCSETIQLAARRVGLKVRRHRPAPA.--RLPRAPLPAIAL----DRQGGYFVLARFe.pgADQAVLIQRP--GQAPARLGQAEFEALWAG.ELLLCACAAS
HLYB_PASSP/5-131 ---HQSN.DLGLVALKMLAQYHNIPLNPEEIKHKFD..IEGKGLTLTSWLLAAKSLELKAKHIKKEIS.-----RLHLVNLPALVWQDNGKHFLLVKID....TDKKRYLTYNLEQDAPKILSQEEFESCYQG.KIILVTSRAS
RT1B_ACTPL/4-130 ---YREE.DYGLYALTILAQYHNIAVNPEELKHKFD..LEGKGLDLTAWLLAAKSLELKAKQVKKAID.-----RLAFIALPALVWREDGKHFILTKID....NEAKKYLIFDLETHNPRILEQAEFESLYQG.KLILVASRAS
Y390_MYCGE/4-131 IYQEQQN.ECGICVIGMLANAIHDEKYVHDELLEQI.nLPPNGLSLFEMESYGKKFGLEINSYQLTF-.-----QELKELDSKFIIVHFKDHFVIVKNK....HENSWEVYDP--AKGKYLLTDEKLEKLWTG.YAATVAKAFK
Y390_MYCPN/4-131 IYQEQPN.ECGICVLGMLANELHEDKYAHDELLEQI.nLPASGLSFFELETYGKKFGLEIASYQLTL-.-----EELKQLEGKYFIVHFPKHFVVVHKK....QDNLWEVFDP--AKGKYLLNDEELKKQWTG.YAATVQKSFK
SUNT_BPSPC/10-143 TKQFNSH.DCGLACISSILKFHNLNYGIDFLLDLIG..-DKEGYSLRDLIVIFKKMGIKTRPLELQENkTFEALKQIKLPCIALLEGEEYGHYITIYEI....RNNYLLVSDPD-KDKITKIKKEDFESKFTN.FILEIDKESI
O53037_HAEIN/41-169 IRQTKNN.SCGAAALATMLKYKFHISEINEDTILYKlkNPNEEASFFELARISKEFNINAIGLALTLK.--ELLNINKPVIAYVNNSLNNDHFIIINGI....FNKELLISDP--AIGNYSLKVSDFEKIWLLrNDKKG-----
O27690_METTH/67-193 VLQTRNY.TCGPAALATVLQRLGVNTTEDELAGLAG..TTEEGTTMQGLLEASRAKGMNATGMKLNIS.------ELKENMIAYTINDGTGHYTVINEI....TNDTIKLADP--SLGNIEMNIEEFAEIYSG.YTLVIKDPNN
Y1463_METTH/16-142 VMQSRSY.SCGPAALATVLRNLGVNCTEAELAELAG..TDESGTTMYGLIVAATSKGLRARGVKMELN.------DLRKNHIVFVKYGDTCHYTVIMSM....DERNVTLADP--ALGRITVKREIFSRIFTG.NVLVVERPCD
Q9RJD7_STRCO/33-163 VLQMEAV.ECGAASLAMVLGHYGRHVPLEELRIACG..VSRDGSRASNLLKAARSYGFTAKGMQMDLA.------ALAEVTAPAILFWEFNHYVVYDGMgrrfGRRGVFINDP--GKGRRFVSLEDFDGSFTG.VVLTMEPGDG
Q46973_ECOLI/27-153 VHQTESS.ECGLACLSMICGHYGRHIDLSTLRRQFN..LSALGTTLAGITEIGSQLGMETRAFSLDLN.--ELSVLKLPCILH----WEFSHFVVLVSV....RKNHFVLHDP--ARGRRTVGLAEMSQCFTG.VALEVWPGTE
CVAB_ECOLI/24-150 IHQTETA.ECGLACLAMICGHFGKNIDLIYLRRKFN..LSARGATLAGINGIAEQLGMATRALSLELD.--ELRVLKTPCILH----WDFSHFVVLVSV....KRNRYVLHDP--ARGIRYISREEMSRYFTG.VALEVWPGSE
P74652_SYNY3/24-154 VQQQSGE.DCAAASLAIIAKHHGRNIRINRIRALVG..TRQGGTTLLGLKYGAQELGFITSAIQAEP-.--EILDELDEWALPAIIFWKGYHFVVLYGQ....EKDKYVIADP--AIGVRYLDRQEVIKGWQGgMMLLLEPDPK
O54354_ANASP/339-465 IQQQSSS.DCGAACLAMISQYWGKRLSLYSLRNLAQ..VDRNGASLEGLTVAAQTLGYDVLPVRGSLP.--KLEWHYNPWVAH----WQGNHYVVVWQI....KGDRVLISDP--AVGRKWLSRPQFETSWTG.YALLLDPTES
O85760_9LIST/7-139 IKQHDEK.DCGVACLSMILNTYGTKIPISKLRNMAG..TNSQGTSALGLVCALETLGFESEVYQTDST.IWKEESLIFPFIAHVVIDKSFLHYVVIYGY....KNGKILLADP--AKGKLTKTPDEFGKEWTG.IVLSTSPTPN
Q9X478_ENTFC/8-140 VQQQDEK.DCGVACLSMILKYFKTDIPIHKLRDLSG..TDLEGTSAFGLKKTFEKLSFDCMAIQADSE.IWKERDLILPLIAHILVDNSYMHYVVIYKT....KGNVLWIADP--ANGKNRKTIEAFQKEWTG.ILLLPMPRET
Q46599_9LACT/5-137 ILQQDEK.DCGVACIAMILKFYRTEIPIHKLRELSG..TDLDGTTAFGLKKTFEKLNFNCSAIQADND.IWQEKELPLPLIAHILVENKYMHYVVIYEV....RGNTLLIADP--AKGKEKKLVSDFSKEWTG.VLLLPIPTDD
Q46317_CARPI/7-139 VQQQDEK.DCGVACIAMILKKYKSEVPIHKLRELSG..TSLEGTSPFGLKNCIEKLGFDCQAVQADQE.VWNEKELPFPLIAHVVINKTYMHYVVVYGV....KENKLLIADP--AEGKMKKSIENFSEEWSG.VLLLMTPKNS
Q9ZEG6_9LACT/6-140 VAQVDNK.DCGIAALSMIMKKYNTNISLSKLRQLAH..TDLNGTTVLGLTKAAEYFKFETKVINANEN.FLEDNTFEAPFIVHVVKNEILAHYYVIYEI....TKNHILVADPDSDVGIFKMKKEDFYEQWTG.IAMFIFPSLE
PEDD_PEDAC/11-145 TAQVDEN.DCGLAALNMILKYYGSDYMLAHLRQLAK..TTADGTTVLGLVKAAKHLNLNAEAVRADMD.ALTASQLPLPVIVHVFKKNKLPHYYVVYQV....TENDLIIGDPDPTVKTTKISKSQFAKEWTQ.IAIIIAPTVK
Q9ZI23_STRSL/7-141 ISQVDQR.DCGVAALAMILKHYGSSYSLAYLRELAQ..TSREGTSALGLVEVAKQLGLETQAIRADLD.LFKQESLSYPFIAHVVKEGGLQHYYTVFGQ....IKGKLVIGDPDPSKKVIKMPLEEFAKEWTG.VALFFVPGET
COMA_STRPN/9-143 RPQVDQM.DCGVASLAMVFGYYGSYYFLAHLRELAK..TTMDGTTALGLVKVAEEIGFETRAIKADMT.LFDLPDLTFPFVAHVLKEGKLLHYYVVTGQ....DKDSIHIADPDPGVKLTKLPRERFEEEWTG.VTLFMAPSPD
P71471_LACPL/7-141 VAQVDEM.DCGVAALAMILKNYGSTTSLAYLRNIAK..TSLEGTTALGLVKTAEKLGFETKAIQADMS.LFEVQDLPLPFIVHVTKNGDLQHFYVVVKT....SKTHVVIADPDPTVAVISMSKERFESEWSG.VALFFAPKSE
Q48868_LACSK/9-143 VAQVDEM.DCGVAALAMVLKHYGSTYSLAYLRQKAK..TDLEGTSALGLMKTAESFDFETKAIQADMS.LFEVEDLPLPFIAHVIKEGGLLHYYVVLSI....KKNQIVIADPDPTVSITKIYKDQFASEWSG.VAIFMAPKPT
Q48872_LACSK/8-142 IPQVDEM.DCGVAALAMILKHYGSSASLAYLRNEAK..TDLEGTTALGLVKTAENLGFETKAIQADMS.LFEVADLPFPFIAHVLKNGELLHYYVVLGI....KKDAIIIADPDPTVGIAKMTQSQFKSEWTG.VALFIAPKPS
MESD_LEUME/14-148 ISQVDER.DCGVAALAMILAHYKTRLSLAKLRDLAK..TDMEGTTALGIVKAANALDFETMPIQADLS.LFDKKDLPYPFIAHVIKEGKYPHYYVVYGM....KGDQLLIADPDNTVGKTKMTKAHFNEEWTG.VSIFIAPNPT
Q9S4D0_STAAU/15-142 SLQIAQT.ECGLCCVKSILNYYDFSVSLPELRKIKE..PGRDGLGLKQIKGLLECYNFKVKNFKVKD-.----NKAFDMLNFPLIAFWKGCHYVVLESY....NDKNVVIMDP--SVGRIKISTLEFNANFDR.YVILCTPNDN
O87239_9LACT/7-134 TFQVAQT.ECGLCCVRTILDYFGYETTVTKLRILKE..PGRDGSSFNDIRKLLERFGVDSKLYKVKD-.----NRIFSTLQLPIIIYWKNVHFVCVERI....SKKTVIIMDP--SVGRTKMSLTEFFQNFSG.LILIPKKNTE
Q57403_9ZZZZ/7-133 VAQGEHS.ECALACITMLLNYYGNQSTLVELREKYG..VPKGGLTIKNIRTVFDEYGFDVSTFKSSFS.------NYLDLPTPVISYWNNQHFVVIEKI....KKKKVLILDP--ASNKRWIDISEFKKNFSN.ILIYAHKKKT
Q9RC21_BACSY/8-137 VRQMGQY.ECGPACLTMILSYYGSTISLNKISEQCD..AQRNGVSVSILKSVSEYYGLNCKVYQVSFK.---DLKKYINSYLPCIIFWDERHFVVLEQI....KKGLFHIIDP--NRGKLKLSEEEFKRHYSK.VILTFKKSDK
O31053_STRPY/4-134 ILQNNEE.DCLLACYTMLLNDLGHKVPLYEIYDKDT..LPADGLNVSYLLSLSDRFGVKINAYHASFD.--ELLKVYGEKKQRMILHWNNDHFVVLEKI....TSNKTVIVDP--AIGRIKYSRDEFLTHYSE.TMVSVNKRNN
LCN3_LACLA/4-135 VLQNNEQ.DCLLACYSMILGYFGRDVAIHELYSGEM..IPPDGLSVSYLKNINMKHQVSMHVYKTDKK.N-SPNKIFYPKMLPVIIQWNDNHFVVVTKI....YRKNVTLIDP--AIGKVKYNYNDFMKKFSG.YIITLSPNSS
Q9ZAB2_STRMU/4-134 VLQNNEQ.DCLIACYAMILSSFGCNVSLEDLYLDEY..IPPDGLSVSYLHSLNTKFRLKMQVLKGDGQ.Q-VLEYIYQHKCK-AIAYWKNSHFVVVDKC....TKKSVNIMDP--SLGTITIPISSFLDNFSS.YILIFSKQSN