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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03408 alignment
(5 sequences with 998 aa)


ENV_SFV3L/5-982 MNLQQWLLWKKMNETHLALENISSLTEEQKQQVIIEIQQEEVIPTRMDRVKYLAYACCATSTRVMCWLFLICVLLIIVFVSCFVTVARIQWNRDINVFGPVIDWNVTHQATYQQLKAARLTRSLKVEHPHISYISINMSSIPQGVMYTPHPEPIILKERVLGISQVLMINSENIANVANLSQETKVLLTDMINEELQDLSNQMIDFELPLGDPRDQDQYIHHKCYQEFAHCYLVKYKKPSPWISEGIIVDQCPLPRIH-DPNYYKYQPIWDYYLKIQNIRPQGWTSKSYYGTARMGSFYIPTFLR-NNTVSHVLFCSDQLYGKWYNIENNIQENEQLLKTKLYN--LTT--YSKLKARALPKEWNNQGNARLFRSFNPLDVCNRPEAVLLLNTTYFTYSLWEGDCNYTTALIQNLT-ECRQ---PDRLKLKHPYACRFWRYKE----GQEEVKCLGNEKKKCLYYSEYSSPEAQFDFGFLSYLNAFPGLKYIENQTVREPEYEVYSLYMECMNSAEKYGIDSVLFALKTFLNFTGTPVNEMSTARAFVGLTDPKFPPTYPNITKEQ--KRCNNLKRRKRS---TNIEKLRSMGYSLTGAVQTLSQISDINDERLQQGVSLLRDHVVTLMEAALHDITIMEGMLAIQHVHTHLNHLKTILLMRKIDWTFIKSNWIKEQLQKTEDEMKIIRRTAKSLVYYVTQTSSSTTATSWEIGIYYEITIPKHIYLNNWQVINIGHLVESAGHLTLIRVKHPYEVINKECTYEQYLHLEDCISQDYVICDTVQIVSPCGNSTTTSDCPVTAEKVKEPYVQVSALKNGSYLVLTSRTDCSIPAYVPSIVTVNETVKCFGVEFHKPLYSESKVS-FEPQVPHLKLRLPHLVGIIANLQNLEIEVTSTQESIKDQIERAKSQLLRLDIHEGDFPAWIQQLASATRDVWPAAARALQGIGNVLSNTAQGIFGTTVSILSYAKPILIGIGVILLIAFLFKIVSWLPGKKKRN
ENV_SFV1/1-985 MTLEQWLLWKKMSQAHQALENVTTLTEEQKQQVIIDIQHEDVVPTRMDKLKYLAYSCCATSTRVLCWIVLVCVLLLVVFISCFVTMSRIQWNKDIAVFGPVIDWNVSQQAVIQQIRAKRLARSIRVEHATETYVEVNMTSIPQGVLYVPHPEPIILKERILGLSQVMMINSENIANTANLTQETKVLLADMINEEMNDLANQMIDFEIPLGDPRDQKQYQHQKCFQEFAHCYLVKYKTTKGWPSSTVIADQCPLPGNH-PTVQYAHQNIWDYYVPFEQIRPEGWNSKSYYEDARIGGFYIPKWLR-NNSYTHVLFCSDQIYGKWYNIDLTAQERENLLVRKLIN--LAKGNSSQLKDRAMPAEWDKQGKADLFRQINTLDVCNRPEMVFLLNSSYYEFSLWEGDCGFTRQNVTQANSLCKDFYNNSKWQKLHPYSCRFWRYKQ----EKEETKCSNGEKKKCLYYPQWDTPEALYDFGFLAYLNSFPSPICIKNQTIREPEYKISSLYLECMNASDRHGIDSALLALKTFLNFTGQSVNEMPLARAFVGLTDPKFPPTYPNITRES--SGCNNNKRKRRSV--NNYERLRSMGYALTGAVQTLSQISDINDERLQHGVYLLRDHVVTLMEAALHDVSIMEGMLAIQHVHTHLNHLKTMLLMRKIDWTFIRSDWIQQQLQKTDDEMKLIRRTARSLVYYVTQTSSSPTATSWEIGIYYEIVIPKHIYLNNWQVINVGHLLESAGHLTHVKVKHPYEIINKECSDTQYLHLEECIREDYVICDIVQIVQPCGNATELSDCPVTALKVKTPYIQVSPLKNGSYLVLSSTKDCSIPAYVPSVVTVNETVKCFGVEFHKPLYAETKTS-YEPQVPHLKLRLPHLTGIIASLQSLEIEVTSTQENIKDQIERAKAQLLRLDIHEGDFPDWLKQVASATRDVWPAAASFIQGVGNFLSNTAQGIFGSAVSLLFYAKPILIGIGVILLIALLFKIISWLPGKPKKN
ENV_FOAMV/1-985 MTLQQWIIWKKMNKAHEALQNTTTVTEQQKEQIILDIQNEEVQPTRRDKFRYLLYTCCATSSRVLAWMFLVCILLIIVLVSCFVTISRIQWNKDIQVLGPVIDWNVTQRAVYQPLQTRRIARSLRMQHPVPKYVEVNMTSIPQGVYYEPHPEPIVVKERVLGLSQILMINSENIANNANLTQEVKKLLTEMVNEEMQSLSDVMIDFEIPLGDPRDQEQYIHRKCYQEFANCYLVKYKEPKPWPKEGLIADQCPLPGYH-AGLTYNRQSIWDYYIKVESIRPANWTTKSKYGQARLGSFYIPSSLR-QINVSHVLFCSDQLYSKWYNIENTIEQNERFLLNKLNN--LTSG-TSVLKKRALPKDWSSQGKNALFREINVLDICSKPESVILLNTSYYSFSLWEGDCNFTKDMISQLVPECDGFYNNSKWMHMHPYACRFWRSKK---NEKEETKCRDGETKRCLYYPLWDSPESTYDFGYLAYQKNFPSPICIEQQKIRDQDYEVYSLYQERKIASKAYGIDTVLFSLKNFLNYTGTPVNEMPNARAFVGLIDPKFPPSYPNVTREH-YTSCNNRKRRSVD---NNYAKLRSMGYALTGAVQTLSQISDINDENLQQGIYLLRDHVITLMEATLHDISVMEGMFAVQHLHTHLNHLKTMLLERRIDWTYMSSTWLQQQLQKSDDEMKVIKRIARSLVYYVKQTHSSPTATAWEIGLYYELVIPKHIYLNNWNVVNIGHLVKSAGQLTHVTIAHPYEIINKECVETIYLHLEDCTRQDYVICDVVKIVQPCGNSSDTSDCPVWAEAVKEPFVQVNPLKNGSYLVLASSTDCQIPPYVPSIVTVNETTSCFGLDFKRPLVAEERLS-FEPRLPNLQLRLPHLVGIIAKIKGIKIEVTSSGESIKEQIERAKAELLRLDIHEGDTPAWIQQLAAATKDVWPAAASALQGIGNFLSGTAQGIFGTAFSLLGYLKPILIGVGVILLVILIFKIVSWIPTKKKNQ
O41895_9RETR/5-988 MTLQQWLQWRYNLETTNLLQMNPKM--ESVCLPDFDPPGDEEVSLRI-RCKYWIYLCCATSTRIMAWIVFILTVLSILLISVLIAVFRLQWKGAIESPGPILVWNNSNSINAQPTTPPHYSRLRRAIHLAQKPVQVNFTSIPQGLFLEPHPKPIISKERVLGLSQVVMVDSSTLTQKLNLEGEAKSLLIKTINEELISLQDVVLNFDLPLGDPHTQEEYIAKRCYQHFGHCYVVHIPGGKEWPTREIIQDQCPLNNSWLTALHYDYLPAWDYYNQPPP-RQLSLKDFRKYNISNNGSRYEAYRLPLQDKIGAVAFCSPTLYSSWWNYTQSSREREELFRRKLET--FLNPQTGCLNPEALPGTWHTLGKGEWFRDLTTYDFCKKPEAVFGLNKTYYSWSLWEGDCGRQGNDTQDYPPECRN---YEKKDGVHVYGCRYWRTYSQTAHTPDNLSCYLSEDY-CLFQPKWDSAEIRSDLGYLAYLGAFPSPICIEARNLTDQDYKVTSIYAECVKQGKQYDIIDVTRQLTSKLTRRGVFLGDLPADRAFSLLTDFSLPASYQNKTQDGRRKVCSSKRTRRS-I--NNWRRLQITGQSMNQAITTLSKLSDLNDENLAAGIHLLQDHIVTLMEATLHDVSLLGHMTSIQHLHTHLATFKNLLIGNRVDWSVLENKWIQEELKYTDEVMNVIRRTARSITYDVQNVKNTSDSTMWEIYIYYELILPERIWIRNWQVANLGHLTHNSGYLTHVTIHHPYEIVNQDCEELTFLHLVDCHEQDYLICEEVMEVEPCGNLTG-SDCPVLAENIQAPYVYLHPLKNGSYLLMASHTDCSLPPYEPVVVTVNDSLECYGKPLKRPLTSHTEIKLFAPQIPQLRVRLPHLVGIIAKLKSLKIKVTSTWESIKDQIHRSEQELLRLDLHEGDYSDWILQLGNALEDVWPVAASAVSTIGTLLEKAAGTLFGNVFSILAYAKPVIIGIILIILLLLVIRILRWLAVERRRK
P90478_9RETR/7-979 MTLKEWMEWN----AHKQLQKLQLTHPELHVDIPEDIHSVPEKVPLKMRMRYRCYTLCATSTRIMFWILFFLLCFSIVTLSTIISILRYQWKEAITHPGPVLSWQVTNSHVTMGGNTSSSSRRRRDIQYHKLPVEVNISGIPQGLFFAPQPKPILHKERTLGLSQVILIDSDTITQG-HIK-QQKAYLVSTINEEMEQLKKTVLPFDLPTKDPLTQKEYIEKRCFQHFGHCYVIEYGSPRKWPFDDLIQDQCPLPVIYSNGPRYRNHTIWSLYIYQPFSVPKNWSNP--YGDARIGSFYVPKEFK-ENA-THGIFCSDQLYGEWYDRTLPSQTLQELAKTFLMRILLKRRNGNKLNESSLAPTLSSKGQKLLFRDLVPYDSCNIPKAVLLLNRTYWPFSLWEGDCGIFQTNITEHAS-CKKF---NRTQTSHPYACTFWRQYL----GNASIKCVD-DSARCYYSPAYTGVENREDFGWQAYNDNFPSPVCIKEIPIIKKNYKVSSVLAECINKAKQYGIKEVIDKLENL--FSTKHVLPEDTFKPYNNFTWPKYEKQNKQQKTSC--EGSKN-KRQRRSVSTENLRRMQEAGLGLANAITTVAKISDLNDQKLAKGVHLLRDHVVTLMEANLDDIVSLGEGIQIEHIHNHLTSLKLLTLENRIDWRFINDSWIQEELGVSDNIMKVIRKTARCIPYNVKQTRNLNTSTAWEIYLYYEIIIPTTIYTQNWNIKNLGHLVRNAGYLSKVWIQQPFEVLNQECGTNIYLHMEECVDQDYIICEEVIEFPPCGNGTG-SDCPVLTKPLTDEYLEIEPLKNGSYLVLSSTTDCGIPAYVPVVITVNDTISCFDKEFKRPLKQELRVTKYAPSVPQLELRVPRLTSLIAKIKGIQIEITSSWETIKEQVARAKAELLRLDLHEGDYPEWLQLLGEATKDVWPAISNFVSGVGNFIKDTAGGIFGTAFSFLGYVKPVLLGFVIIFCIILIIKIIGWLQNTRKKD