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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03404 phylogeny
for restricted amino acid alignment


 
((((((((((((Q92237_GIBFU/337-485,NIA_BEABA/325-473),O13486_METAN/326-474),(O00101_PHANO/325-472,((Q00284_ASPPA/308-454,(Q01696_PENCH/305-451,NIA_EMENI/306-452)),Q00303_BOTCI/326-475))),NIA_NEUCR/404-554),(NIA_PICAN/293-438,(NIA_USTMA/287-441,Q9UVH6_HEBCY/326-475))),(((NIA3_MAIZE/342-475,(NIA1_ORYSA/353-486,NIA1_BRANA/352-485)),(NIA_VOLCA/301-431,Q42497_CHLVU/325-454)),NIA_PHYIN/338-474)),SUOX_DROME/439-573),(SUOX_HUMAN/360-487,Q9XTQ8_CAEEL/410-540)),Q9SNW2_ARATH/258-389),(Q9XB11_MYCBO/246-367,Q9RA07_VIBMA/297-417)),P72178_PARDE/296-416),Q9RYT3_DEIRA/226-345,Q9RJI4_STRCO/413-531);
((((((((((((Q92237_GIBFU/337-485:0.11839,NIA_BEABA/325-473:0.17786):0.03633,O13486_METAN/326-474:0.18970):0.05592,(O00101_PHANO/325-472:0.23193,((Q00284_ASPPA/308-454:0.18637,(Q01696_PENCH/305-451:0.16083,NIA_EMENI/306-452:0.12294):0.06893):0.09212,Q00303_BOTCI/326-475:0.25115):0.08676):0.04585):0.07935,NIA_NEUCR/404-554:0.24230):0.06039,(NIA_PICAN/293-438:0.51105,(NIA_USTMA/287-441:0.48620,Q9UVH6_HEBCY/326-475:0.23526):0.16373):0.05068):0.30216,(((NIA3_MAIZE/342-475:0.12917,(NIA1_ORYSA/353-486:0.13307,NIA1_BRANA/352-485:0.11350):0.03233):0.26249,(NIA_VOLCA/301-431:0.22690,Q42497_CHLVU/325-454:0.32317):0.14317):0.15414,NIA_PHYIN/338-474:0.38374):0.05088):0.72257,SUOX_DROME/439-573:0.46704):0.05490,(SUOX_HUMAN/360-487:0.26484,Q9XTQ8_CAEEL/410-540:0.49212):0.11323):0.12039,Q9SNW2_ARATH/258-389:0.45382):0.14548,(Q9XB11_MYCBO/246-367:0.60907,Q9RA07_VIBMA/297-417:0.95497):0.10687):0.21830,P72178_PARDE/296-416:0.89812):0.16635,Q9RYT3_DEIRA/226-345:0.58761,Q9RJI4_STRCO/413-531:1.01516);