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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03403 alignment
(8 sequences with 448 aa)


PAFA_HUMAN/48-416 AASFGQTKIPRGNGPYSVG-------------CTDLMFDHT-N--KGTFLRLYYPS---Q-DNDRLDTLWIPNKEYFWGLSKFLGTHWLMGNIL-RLLFGSMTTPANWNSPLRPG--EK-YPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIG-------DKSWLYLRTLKQ-EEETHIRNEQVRQRAKECSQALSLILDID-HGKPVKNA-----LDLKFD---MEQLKDSIDREK--IAVIGHSFGGATVI-------QTLSED----QRFRCGIALDAWMFPLGDEVY.SRIPQPLFFINSEYFQYPANIIKMKK----------------------CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKL--KGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENL
PAFA_MOUSE/47-415 AAGSGHSKIPKGNGSYPVG-------------CTDLMFGYG-N--ESVFVRLYYPA---Q-DQGRLDTVWIPNKEYFLGLSIFLGTPSIVGNIL-HLLYGSLTTPASWNSPLRTG--EK-YPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYFFEDQVAAKVE-------NRSWLYLRKVKQ-EESESVRKEQVQQRAIECSRALSAILDIE-HGDPKENV-----LGSAFD---MKQLKDAIDETK--IALMGHSFGGATVL-------QALSED----QRFRCGVALDPWMYPVNEELY.SRTLQPLLFINSAKFQTPKDIAKMKK----------------------FYQPDKERKNDYNQGLRHQNFDDFTFVTGKIIGNKLTL--KGEIDSRVAIDLTNKASMAFLQKHLGLQKDFDQWDPLVEGDDENL
PAFA_CAVPO/48-414 ITSFGHTTIPKGNGPYSVG-------------CTDLMSGYT-N--QSSFLRLYYPS---Q-DNDFPDALWIPNEEYFQGLTETLGASSFLGKLL-KLLYGSVKVPAKWNSPLKTG--EK-YPLIIFSHGLGAFRSIYSAIGIELASHGFIVAAVEHRDESAAATYYFQDAPAAESG-------NRSWIYYKVG---NLETEERKRQLRQRGEECSQALSWLLSID-EGEPVKNV-----LDLNFD---IQQLKGSLDRSK--VAIIGHSFGGATVI-------QTLSED----QRFRCGIALDPWMFPVGEDVH.SKIPQPLFFINSEYFQSANDTKKIEK----------------------FYQPQKERKMIAVKGSVHHNFVDFTFATGKIIGQMLSL--KGKIDSEVAMDLINKASLAFLQKYLGLDKNFDQWNSLMEGDDENL
PAFA_CHICK/31-410 GGAEKGYRIPAGKGPHAVG-------------CTDLMTGDA-A--EGSFLRLYYLSC--D-DTDTEETPWIPDKEYYQGLSDFLNVYRALGERLFQYYVGSVTCPAKSNAAFKPG--EK-YPLLVFSHGLGAFRTIYSAICIEMASQGFLVAAVEHRDESASATYFCKKKADSEPEEDQTSGVEKEWIYYRKLRAGEEERCLRHKQVQQRAQECIKALNLILKIS-SGEEVMNV-----LNSDFD---WNHLKDSVDTSR--IAVMGHSFGGATVI-------ESLSKE----IRFRCGIALDAWMLPVGDDTYqSSVQQPLLFINSEKFQWAANILKMKK----------------------LSSNDTNKKMITIKGSVHQSFPDFTFVSGEIIGKFFKL--KGEIDPNEAIDICNHASLAFLQKHLSLKRDFDKWDSLVDGIGPNV
PAF2_HUMAN/1-381 MGVNQSVGFPPVTGPHLVG-------------CGDVMEGQN-L--QGSFFRLFYPCQ--KAEETMEQPLWIPRYEYCTGLAEYLQFNKRCGGLLFNLAVGSCRLPVSWNGPFKTK--DSGYPLIIFSHGLGAFRTLYSAFCMELASRGFVVAVPEHRDRSAATTYFCKQAP--EENQPTNESLQEEWIPFRRVEEGEKEFHVRNPQVHQRVSECLRVLKILQEVT-AGQTVFNI-----LPGGLD---LMTLKGNIDMSR--VAVMGHSFGGATAI-------LALAKE----TQFRCAVALDAWMFPLERDFY.PKARGPVFFINTEKFQTMESVNLMKK----------------------ICAQHEQSRIITVLGSVHRSQTDFAFVTGNLIGKFFSTETRGSLDPYEGQEVMVRAMLAFLQKHLDLKEDYNQWNNLIEGIGPSL
O44753_CAEEL/4-368 YLSSPQILTRKMPGQFKVG-------------CMDLMIEEAAG--SGLFMRLFFPTD-SEITGPSSLPVWIPRPEYAYGVGEYLGHSPHQMDLISSLVIGDKRVDCIDNAQLSTK-SDK-WPVLVFSHGLGGSRTFYSTYCTSLASHGYVVAAVEHRDSSACWTYKLVEKNGTLVE-------KPMKIKLVDRN-DKDQFKIRNEQVGKRAEECAKAVKILEQLD-SGNVKDKV----IIGNNAN---LEFFKNKLLTTT--ASIIGHSFGGATSI-------ASSSSD------FQKAIVLDGWMYPLDQNQQ.EQAKQPIMFLNVGDWQWNENLEVMRK----------------------ILPNNEGNILLTLSGAVHQSFTDFPFVFPNWLAKQFGV--HGPTEPYLCMQSAIELTLSFLKDGKD---------GVQKLKDEKY
PAFA_CAEEL/4-372 YISSPQVLTRQVSGQFQVG-------------CKDLMIDGTVLGDRGLFMRLYFPTD-SQAADISSYPLWLPKPQYAHGLGEYLGQSSQKMNVITSTVVGEKREDCIENAQMSTK-CDK-WPIVVFSHGLGGSRTFYSTYCTSLASHGYVVAAVEHKDHSACWTYQLTEKNGELVE-------QPIKIKLIEKNE-KNEFKIRNQQVGKRVTECVKALNVLEQLN-LGTVPEKV----LIGNDYN---WAQFKNKLVMSS--ASVIGHSFGGATSL-------ASSAYT----TDFQKAIVFDGWMYPLDSTQQ.EQAKQPTLFLNVGDWQWNENLDVMKK----------------------IISHNDGNLALTLNGAVHQCFSDFPFIFPSWLAKKFGV--QGRTEPSLCMQAAIELSLAFLENGKD---------GAQKLKDEKF
Q9URV1_SCHPO/3-430 LGFSSKKQLPAYCGPLPVGSLVLELSVPEEFRCEYKTIEHK-L--RTVKVRIFYPLDPTKDVEPRTDELWLPFHE---GIPEVAKGFRWWLLRAFASGLTNLALPVYKGELFHPPNNGK-LPVFIFSHGLVGSRNVYSSLCGTIASYGIVVLAMEHRDNSAIISTV-RDPLHPEEPPYVVQYRE-----ISDFYA-DATVVLQNERLLFRQQEIQIALQMIRNINDLGTPDENLPFLCSVDSSFYNSVFQSMKGNLNTAQGELIVAGHSFGAATCAFISGSSTKSLYNDYMFHTEFKCSILYDIWMLPVRQLHL.STMRYPTLMIISYEFRRFVDNFQALESWLVNKDSENQNAGESADEKMSVVPLKKYSHVFVYDGTVHANQSDLPILLPRMVLRVLKG--KFEADPYEALRINTRSSVQFLREN---HVENVQGDNDPSSLQTNI