EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03403 alignment
(8 sequences with 1344 bp)


PAFA_HUMAN/48-416 GCTGCAAGCTTTGGCCAAACTAAAATCCCCCGGGGAAATGGGCCTTATTCCGTTGGT---------------------------------------TGTACAGACTTAATGTTTGATCACACT---AAT------AAGGGCACCTTCTTGCGTTTATATTATCCATCC---------CAA---GATAATGATCGCCTTGACACCCTTTGGATCCCAAATAAAGAATATTTTTGGGGTCTTAGCAAATTTCTTGGAACACACTGGCTTATGGGCAACATTTTG---AGGTTACTCTTTGGTTCAATGACAACTCCTGCAAACTGGAATTCCCCTCTGAGGCCTGGT------GAAAAA---TATCCACTTGTTGTTTTTTCTCATGGTCTTGGGGCATTCAGGACACTTTATTCTGCTATTGGCATTGACCTGGCATCTCATGGGTTTATAGTTGCTGCTGTAGAACACAGAGATAGATCTGCATCTGCAACTTACTATTTCAAGGACCAATCTGCTGCAGAAATAGGG---------------------GACAAGTCTTGGCTCTACCTTAGAACCCTGAAACAA---GAGGAGGAGACACATATACGAAATGAGCAGGTACGGCAAAGAGCAAAAGAATGTTCCCAAGCTCTCAGTCTGATTCTTGACATTGAT---CATGGAAAGCCAGTGAAGAATGCA---------------TTAGATTTAAAGTTTGAT---------ATGGAACAACTGAAGGACTCTATTGATAGGGAAAAA------ATAGCAGTAATTGGACATTCTTTTGGTGGAGCAACGGTTATT---------------------CAGACTCTTAGTGAAGAT------------CAGAGATTCAGATGTGGTATTGCCCTGGATGCATGGATGTTTCCACTGGGTGATGAAGTATAT...TCCAGAATTCCTCAGCCCCTCTTTTTTATCAACTCTGAATATTTCCAATATCCTGCTAATATCATAAAAATGAAAAAA------------------------------------------------------------------TGCTACTCACCTGATAAAGAAAGAAAGATGATTACAATCAGGGGTTCAGTCCACCAGAATTTTGCTGACTTCACTTTTGCAACTGGCAAAATAATTGGACACATGCTCAAATTA------AAGGGAGACATAGATTCAAATGTAGCTATTGATCTTAGCAACAAAGCTTCATTAGCATTCTTACAAAAGCATTTAGGACTTCATAAAGATTTTGATCAGTGGGACTGCTTGATTGAAGGAGATGATGAGAATCTT
PAFA_MOUSE/47-415 GCTGCCGGCTCTGGCCATAGTAAAATCCCCAAAGGAAATGGATCGTACCCCGTCGGT---------------------------------------TGTACAGATCTGATGTTCGGTTATGGG---AAT------GAGAGCGTCTTCGTGCGTTTGTACTACCCAGCT---------CAA---GATCAAGGTCGCCTCGACACTGTTTGGATCCCAAACAAAGAATATTTTTTGGGTCTTAGTATATTTCTTGGAACACCCAGTATTGTAGGCAATATTTTA---CACCTCTTATATGGTTCTCTGACAACTCCTGCAAGCTGGAATTCTCCTTTAAGGACTGGA------GAAAAA---TACCCGCTCATTGTCTTTTCTCATGGTCTCGGAGCCTTCAGGACGATTTATTCTGCTATTGGCATTGGCTTGGCATCTAATGGGTTTATAGTGGCCACTGTCGAACACAGAGACAGATCTGCATCGGCAACTTACTTTTTTGAAGACCAGGTGGCTGCAAAAGTGGAA---------------------AACAGGTCTTGGCTTTACCTGAGAAAAGTAAAACAA---GAGGAGTCGGAAAGTGTCCGGAAAGAACAGGTTCAGCAAAGAGCAATAGAATGTTCCCGGGCTCTCAGTGCGATTCTTGACATTGAA---CATGGAGACCCAAAAGAGAATGTA---------------CTAGGTTCAGCTTTTGAC---------ATGAAACAGCTGAAGGATGCTATTGATGAGACTAAA------ATAGCTTTGATGGGACATTCTTTTGGAGGAGCAACAGTTCTT---------------------CAAGCCCTTAGTGAGGAC------------CAGAGATTCAGATGTGGAGTTGCTCTTGATCCATGGATGTATCCGGTGAACGAAGAGCTGTAC...TCCAGAACCCTCCAGCCTCTCCTCTTTATCAACTCTGCCAAATTCCAGACTCCAAAGGACATCGCAAAAATGAAAAAG------------------------------------------------------------------TTCTACCAGCCTGACAAGGAAAGGAAAAATGATTACAATCAAGGGCTCAGGCACCAGAACTTTGACGACTTTACTTTTGTAACTGGCAAAATAATTGGAAACAAGCTGACACTG------AAAGGAGAAATCGATTCCAGAGTAGCCATCGACCTCACCAACAAAGCTTCGATGGCTTTCTTACAAAAGCATTTAGGGCTTCAGAAAGACTTTGATCAGTGGGACCCTCTGGTGGAAGGAGATGATGAGAACCTG
PAFA_CAVPO/48-414 ATTACCAGCTTTGGACACACAACAATCCCCAAGGGAAATGGACCTTACTCCGTGGGT---------------------------------------TGTACAGACCTGATGTCTGGTTACACT---AAC------CAGAGCAGCTTTTTGCGCTTGTATTATCCATCG---------CAA---GATAATGATTTCCCTGATGCCCTGTGGATCCCAAATGAAGAGTATTTCCAGGGTCTTACTGAAACCCTTGGAGCATCTAGTTTCCTGGGCAAACTTTTG---AAGCTGTTATACGGCTCAGTGAAGGTTCCTGCAAAGTGGAATTCTCCTCTGAAGACCGGT------GAAAAA---TACCCACTAATTATCTTTTCTCATGGTCTTGGAGCATTCAGGTCAATTTATTCTGCTATAGGCATTGAGCTGGCGTCTCATGGGTTCATAGTTGCTGCTGTAGAACACAGAGATGAATCTGCCGCTGCTACTTACTACTTCCAGGACGCTCCTGCAGCTGAATCAGGC---------------------AACAGGTCTTGGATTTACTACAAAGTTGGA---------AACCTAGAGACAGAAGAGCGAAAAAGGCAGTTACGGCAGCGAGGGGAGGAGTGTTCCCAGGCTCTCAGTTGGCTTCTCAGCATTGAC---GAAGGAGAGCCAGTGAAGAACGTG---------------TTGGATTTGAACTTTGAC---------ATTCAGCAACTGAAGGGCTCTCTTGATAGGAGTAAA------GTAGCGATCATTGGACATTCATTTGGTGGAGCAACAGTTATC---------------------CAGACCCTCAGTGAAGAC------------CAGAGATTCAGGTGTGGCATTGCCCTGGATCCATGGATGTTTCCGGTGGGGGAGGACGTCCAT...TCCAAAATCCCACAACCCCTCTTTTTTATCAACTCTGAATACTTCCAAAGTGCTAATGATACCAAAAAAATAGAAAAG------------------------------------------------------------------TTCTACCAACCTCAAAAAGAGAGAAAAATGATTGCAGTCAAGGGTTCAGTCCATCACAATTTTGTTGACTTCACTTTTGCCACTGGGAAAATTATTGGACAGATGTTATCATTG------AAAGGAAAGATAGACTCAGAGGTAGCTATGGACCTCATCAACAAAGCTTCGTTAGCATTCTTACAGAAATACTTAGGACTTGATAAAAATTTTGACCAGTGGAACTCTCTGATGGAAGGAGATGATGAGAATCTT
PAFA_CHICK/31-410 GGCGGCGCGGAGAAGGGCTATCGGATCCCCGCCGGGAAGGGCCCGCACGCCGTGGGC---------------------------------------TGCACGGATCTGATGACCGGCGACGCG---GCC------GAGGGAAGCTTTTTGCGCCTGTATTACCTATCGTGT------GAC---GACACAGATACTGAAGAGACACCCTGGATTCCAGATAAAGAGTACTACCAGGGGCTGTCTGACTTCCTCAACGTGTACCGGGCCCTGGGAGAAAGGCTTTTCCAGTACTACGTTGGCTCAGTGACCTGTCCTGCAAAATCAAACGCTGCTTTTAAGCCAGGA------GAGAAA---TACCCACTGCTCGTTTTTTCCCATGGACTTGGAGCTTTTCGGACCATCTATTCTGCTATCTGCATAGAGATGGCTTCTCAAGGCTTTCTAGTGGCAGCTGTGGAGCACAGAGATGAATCGGCTTCAGCAACGTATTTCTGTAAAAAGAAGGCTGATTCTGAGCCAGAGGAGGATCAAACATCAGGCGTGGAGAAGGAGTGGATCTACTACAGGAAGCTCAGAGCAGGAGAGGAGGAGCGCTGTCTGCGTCACAAGCAGGTACAGCAGAGAGCACAGGAGTGCATCAAAGCGCTCAACCTCATTCTTAAGATCAGT---TCAGGAGAGGAAGTGATGAATGTG---------------CTGAACTCAGACTTTGAC---------TGGAACCACCTGAAGGATTCTGTTGATACTAGCAGA------ATAGCTGTGATGGGACACTCTTTTGGTGGTGCTACAGTTATT---------------------GAGAGCCTCAGCAAAGAA------------ATTAGATTTAGGTGTGGCATTGCCCTTGATGCGTGGATGCTCCCGGTAGGCGATGACACTTACcaaAGCAGTGTGCAGCAACCACTGCTCTTTATTAATTCCGAAAAATTCCAGTGGGCTGCCAATATCTTAAAGATGAAGAAG------------------------------------------------------------------CTTAGCTCCAATGATACCAACAAGAAAATGATCACCATCAAAGGATCGGTACATCAGAGCTTTCCTGATTTTACTTTTGTGAGTGGAGAAATCATTGGAAAGTTTTTCAAGTTA------AAAGGAGAAATAGACCCAAATGAAGCTATTGATATATGCAACCACGCTTCATTGGCCTTCCTGCAGAAACATCTGAGTCTTAAGAGAGATTTTGATAAGTGGGATTCACTCGTGGATGGCATAGGACCCAATGTT
PAF2_HUMAN/1-381 ATGGGGGTCAACCAGTCTGTGGGCTTTCCACCTGTCACAGGACCCCACCTCGTAGGC---------------------------------------TGTGGGGATGTGATGGAGGGTCAGAAT---CTC------CAGGGGAGCTTCTTTCGACTCTTCTACCCCTGCCAA------AAGGCAGAGGAGACCATGGAGCAGCCCCTGTGGATTCCCCGCTATGAGTACTGCACTGGCCTGGCCGAGTACCTGCAGTTTAATAAGCGCTGCGGGGGCTTGCTGTTCAACCTGGCGGTGGGATCTTGTCGCCTGCCTGTTAGCTGGAATGGCCCCTTTAAGACAAAG------GACTCTGGATACCCCTTGATCATCTTCTCCCATGGCCTAGGAGCCTTCAGGACTTTGTATTCAGCCTTCTGCATGGAGCTGGCCTCACGTGGCTTTGTGGTTGCTGTGCCAGAGCACAGGGACCGGTCAGCGGCAACCACCTATTTCTGCAAGCAGGCCCCA------GAAGAGAACCAGCCCACCAATGAATCGCTGCAGGAGGAATGGATCCCTTTCCGTCGAGTTGAGGAAGGGGAGAAGGAATTTCATGTTCGGAATCCCCAGGTGCATCAGCGGGTAAGCGAGTGTTTACGGGTGTTGAAGATCCTGCAAGAGGTCACT---GCTGGGCAGACTGTCTTCAACATC---------------TTGCCTGGTGGCTTGGAT---------CTGATGACTTTGAAGGGCAACATTGACATGAGCCGT------GTGGCTGTGATGGGACATTCATTTGGAGGGGCCACAGCTATT---------------------CTGGCTTTGGCCAAGGAG------------ACCCAATTTCGGTGTGCGGTGGCTCTGGATGCTTGGATGTTTCCTCTGGAACGTGACTTTTAC...CCCAAGGCCCGAGGACCTGTGTTCTTTATCAATACTGAGAAATTCCAGACAATGGAGAGTGTCAATTTGATGAAGAAG------------------------------------------------------------------ATATGTGCCCAGCATGAACAGTCTAGGATCATAACCGTTCTTGGTTCTGTTCATCGGAGTCAAACTGACTTTGCTTTTGTGACTGGCAACTTGATTGGTAAATTCTTCTCCACTGAAACCCGTGGGAGCCTGGACCCCTATGAAGGGCAGGAGGTTATGGTACGGGCCATGTTGGCCTTCCTGCAGAAGCACCTCGACCTGAAAGAAGACTATAATCAATGGAACAACCTTATTGAAGGCATTGGACCGTCGCTC
O44753_CAEEL/4-368 TACCTCTCATCACCTCAAATACTTACTCGTAAGATGCCTGGGCAATTTAAAGTCGGA---------------------------------------TGCATGGATCTTATGATTGAGGAAGCAGCTGGC------TCGGGACTTTTCATGAGATTGTTCTTTCCAACGGAT---TCTGAGATCACTGGCCCCTCATCTCTCCCTGTGTGGATACCTAGACCAGAATACGCCTATGGTGTAGGAGAATATCTGGGACATTCCCCTCATCAAATGGATCTTATTTCATCGTTAGTCATCGGCGACAAAAGAGTGGATTGTATTGACAATGCACAACTATCCACGAAA---AGTGACAAA---TGGCCAGTCTTAGTGTTTTCACACGGTCTTGGCGGCTCTCGAACATTCTACTCAACATATTGCACATCTCTTGCTTCACATGGATATGTTGTCGCTGCTGTTGAGCATAGAGATTCTTCCGCTTGCTGGACCTATAAACTTGTTGAAAAAAATGGGACTCTTGTTGAG---------------------AAACCTATGAAAATCAAGTTAGTCGACAGAAAT---GATAAGGATCAGTTTAAGATAAGAAATGAACAGGTCGGGAAACGGGCCGAAGAATGTGCGAAGGCGGTTAAAATCTTGGAGCAGTTGGAT---TCTGGAAACGTTAAAGATAAAGTT------------ATCATTGGAAACAACGCAAAT---------CTGGAATTTTTCAAGAATAAGCTTCTCACGACGACT------GCGTCAATTATTGGTCACTCTTTTGGAGGTGCAACTAGCATT---------------------GCCTCTTCTTCCTCGGAT------------------TTCCAAAAAGCAATTGTATTGGATGGATGGATGTATCCATTGGATCAAAATCAACAG...GAGCAGGCAAAACAGCCGATAATGTTCCTAAATGTTGGAGATTGGCAGTGGAATGAGAATTTGGAAGTTATGAGGAAA------------------------------------------------------------------ATTCTTCCAAATAACGAAGGAAACATTCTCTTGACTTTAAGTGGAGCTGTTCATCAGAGTTTTACCGATTTCCCATTTGTTTTTCCAAATTGGCTCGCCAAGCAGTTCGGAGTT------CATGGACCTACTGAGCCATATCTCTGTATGCAATCTGCAATTGAACTCACATTGTCATTTTTGAAAGATGGGAAAGAT---------------------------GGTGTTCAGAAGTTGAAAGATGAAAAGTAC
PAFA_CAEEL/4-372 TATATCTCGTCGCCACAAGTTCTAACACGCCAGGTGTCGGGTCAGTTTCAAGTCGGG---------------------------------------TGCAAGGATTTAATGATCGATGGAACAGTTCTCGGAGATCGTGGATTGTTTATGAGACTTTATTTTCCGACGGAT---TCTCAAGCCGCCGACATCTCTTCATATCCATTATGGCTTCCTAAACCTCAATATGCACACGGACTTGGTGAATATTTAGGCCAATCTTCTCAGAAAATGAATGTTATTACATCAACCGTTGTTGGAGAAAAAAGGGAAGATTGTATTGAGAATGCTCAGATGTCAACAAAA---TGTGACAAA---TGGCCGATTGTCGTGTTCTCCCATGGTCTCGGTGGTTCGCGCACGTTCTACTCCACGTACTGCACGTCGTTGGCCTCTCACGGCTACGTTGTCGCAGCTGTCGAACATAAGGATCATTCCGCATGTTGGACCTACCAATTGACGGAGAAAAATGGAGAGTTGGTGGAA---------------------CAGCCGATCAAGATCAAACTGATCGAGAAGAATGAA---AAAAATGAATTCAAGATTAGGAATCAACAGGTTGGAAAAAGAGTCACCGAATGTGTCAAGGCTCTCAATGTGTTGGAACAACTTAAC---CTGGGAACTGTCCCCGAGAAAGTT------------TTGATTGGAAATGATTACAAC---------TGGGCACAATTCAAGAATAAGTTGGTCATGTCATCC------GCTTCTGTCATTGGACATTCATTTGGCGGCGCAACATCTTTG---------------------GCATCATCCGCCTACACA------------ACGGACTTCCAAAAAGCAATTGTTTTCGATGGCTGGATGTACCCACTGGACTCAACTCAACAA...GAGCAAGCGAAGCAGCCAACGCTGTTTTTGAATGTTGGAGATTGGCAGTGGAATGAGAATTTGGACGTTATGAAAAAA------------------------------------------------------------------ATCATCTCACACAATGATGGGAATCTTGCGTTGACTTTGAATGGTGCGGTGCATCAATGCTTCTCCGATTTTCCATTCATTTTCCCATCGTGGCTCGCAAAGAAATTTGGAGTT------CAGGGCCGAACGGAACCATCATTGTGCATGCAAGCTGCCATCGAACTTTCTCTCGCTTTTCTTGAAAATGGAAAGGAT---------------------------GGAGCTCAAAAGTTGAAAGATGAAAAGTTT
Q9URV1_SCHPO/3-430 TTGGGATTTTCTTCGAAAAAGCAATTACCTGCCTACTGTGGTCCCTTGCCTGTGGGGTCTTTAGTCTTAGAGCTGAGTGTTCCAGAGGAATTTCGATGTGAATATAAAACCATTGAACACAAA---CTA------AGAACCGTAAAAGTACGCATTTTTTATCCATTGGACCCAACAAAAGATGTAGAGCCTCGCACCGATGAGCTTTGGTTACCATTCCATGAG---------GGTATACCCGAAGTTGCGAAAGGTTTTCGTTGGTGGCTTCTTCGTGCGTTCGCTTCTGGTTTGACCAACTTAGCTTTGCCCGTCTACAAAGGAGAGTTGTTTCATCCACCGAACAATGGGAAA---CTGCCAGTATTTATCTTCAGCCATGGATTGGTTGGCTCGAGAAATGTGTATTCTTCGTTATGTGGTACAATCGCTTCCTATGGTATCGTCGTCTTGGCCATGGAGCATAGAGATAACTCGGCCATCATATCTACAGTG---CGTGATCCATTACATCCTGAAGAACCCCCGTACGTTGTTCAGTATCGCGAG---------------ATAAGCGACTTTTATGCA---GACGCTACGGTTGTGCTTCAGAATGAACGACTTTTATTTCGACAGCAGGAAATCCAAATAGCCCTCCAGATGATTCGAAATATCAATGACCTTGGAACTCCGGACGAAAACTTACCCTTTCTTTGCTCTGTGGACTCTTCTTTTTATAATTCTGTTTTCCAATCCATGAAGGGTAATTTGAATACCGCTCAAGGAGAATTGATTGTTGCTGGTCATTCTTTTGGTGCCGCTACTTGCGCATTCATTTCCGGTTCTTCTACCAAGTCCTTATATAATGACTATATGTTTCACACTGAGTTTAAGTGCTCCATTTTATACGATATATGGATGCTTCCCGTACGCCAGCTCCATTTG...AGTACGATGAGGTATCCTACGCTCATGATTATATCTTACGAATTTCGTCGGTTTGTCGACAATTTTCAAGCTCTCGAAAGTTGGCTTGTAAACAAGGATTCAGAAAACCAAAACGCAGGCGAATCCGCTGATGAGAAAATGTCTGTCGTTCCTTTAAAAAAATATTCCCACGTGTTTGTTTATGATGGAACAGTACATGCTAACCAAAGCGATTTACCGATTTTGCTCCCTCGCATGGTACTAAGGGTATTGAAAGGA------AAATTTGAAGCAGACCCTTATGAAGCTTTACGCATTAATACTCGTTCATCTGTACAATTCCTTCGTGAAAAT---------CATGTTGAAAATGTTCAGGGAGATAATGATCCTTCGTCGTTGCAAACAAATATT