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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03401 - Bug)
Bordetella uptake gene (bug) product
(Pfam reference: accession no. PF03401)
(Interpro reference: accession no. IPR005064)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
10 sequences @ 281 aa
(ave. pairwise identity: 0.37)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.95)
nucleotides
(available for above)
9 sequences @ 843 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 3.79)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 281 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 5.62)