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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03342 - Rhabdo_M1)
Rhabdovirus M1 matrix protein (M1 polymerase-associated protein)
(Pfam reference: accession no. PF03342)
(Interpro reference: accession no. IPR005010)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 230 aa
(ave. pairwise identity: 0.42)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.24)
nucleotides
(available for above)
4 sequences @ 690 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 91.14)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 230 aa
(ave. pairwise identity: 0.42)
New Hampshire format
(total tree length: 2.24)