PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF03341 - Pox_mRNA-cap) |
| Poxvirus mRNA capping enzyme, small subunit |
| (Pfam reference: accession no. PF03341) |
| (Interpro reference: accession no. IPR005009) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
5 sequences @ 287 aa (ave. pairwise identity: 0.64) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 1.25) |
| nucleotides (available for above) |
5 sequences @ 861 bp (ave. pairwise identity: 0.62) |
New Hampshire format (total tree length: 1.47) |
|
amino acids, restricted set (corresp. to available nt seqs) |
5 sequences @ 287 aa (ave. pairwise identity: 0.64) |
New Hampshire format (total tree length: 1.25) |