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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03330 phylogeny
for nucleotide alignment


 
(((((((((Q9SDZ3_9FILI/63-148,((((((Q84L77_PYRCO/65-150,Q9SWD3_9CARY/17-94),(Q8S347_CAPAN/59-136,EXPA5_ARATH/73-151)),Q8L9W7_ARATH/58-143),((Q84L40_MIRJA/67-154,(EXPA2_ARATH/67-152,(Q84L49_MIRJA/65-150,Q9AYR1_EUSGR/33-120))),((Q8LGS7_PHYPA/73-158,(Q7XJA2_PHYPA/67-149,Q84V44_PHYPA/67-150)),Q9ZTG7_LYCES/19-103))),(Q7XJA5_MARPO/33-124,Q9FYS9_9LAMI/22-113)),(((Q7X9Q2_SAMNI/65-153,Q9ZP38_TOBAC/65-153),Q8LG16_ARATH/61-149),((EXPA7_ARATH/72-157,EXP18_ARATH/66-152),EXP17_ARATH/63-151)))),(Q946I1_ORYSA/65-158,((Q7XUD0_ORYSA/67-153,Q8LAT2_ARATH/75-161),(Q7XJA1_PHYPA/86-171,(Q946I5_ORYSA/18-105,EXP20_ARATH/65-152))))),(P93442_ORYSA/59-144,(((Q8W2X8_ORYSA/72-160,Q9SNH7_ORYSA/89-175),(((Q946H8_ORYSA/85-173,(((Q8LMP8_ORYSA/84-161,(Q9FY29_FESPR/64-151,Q9FY28_FESPR/60-147)),Q7XE34_ORYSA/62-150),Q7XE35_ORYSA/59-147)),((Q946I9_ORYSA/59-146,Q9FY31_FESPR/62-149),((Q9XHW9_ORYSA/62-149,Q9XHX0_ORYSA/60-147),Q8H6F7_MUSAC/60-147))),((Q8LMP7_ORYSA/65-153,Q946H7_ORYSA/62-150),O24208_ORYSA/69-157))),Q9FY30_FESPR/64-150))),((Q8LKJ9_GOSHI/67-151,EXP12_ARATH/62-146),(Q84V43_PHYPA/66-153,Q84V45_PHYPA/65-152))),Q8H276_ORYSA/110-180),((((Q7XCL0_ORYSA/68-146,Q8LGS6_ORYSA/74-151),(Q8H274_ORYSA/71-148,(((EXPR1_ARATH/62-139,Q8H4Q7_ORYSA/61-139),O65013_PINRA/74-152),((Q8LC65_ARATH/58-137,Q7XHJ2_QUERO/61-138),Q84L47_MIRJA/44-123)))),((((Q84V41_PHYPA/70-157,Q84V42_PHYPA/73-155),((Q7XCG7_ORYSA/80-159,((MPAC1_CYNDA/56-135,MPAL1_LOLPR/78-157),Q8H7T4_ORYSA/78-157)),(((Q84UA7_MAIZE/80-159,Q94KT1_MAIZE/22-101),Q9FQ82_ORYSA/80-159),((Q9ZR84_WHEAT/77-158,(O24230_ORYSA/68-147,Q949I4_FESPR/69-150)),Q94LR4_ORYSA/92-171)))),(Q7XT39_ORYSA/81-163,(Q941I7_ORYSA/75-166,((Q9FRU8_ATRLE/80-160,(Q9AXE4_TOBAC/81-163,Q84WA9_ARATH/69-151)),Q39802_SOYBN/84-165)))),Q94KT0_MAIZE/117-199)),((Q8LBG2_ARATH/66-146,EXPB1_ARATH/76-159),Q8LLL9_ORYSA/84-166))),(Q9AF65_CLAMS/559-624,((Q9ZP41_9ROSI/51-128,(EXPR2_ARATH/45-121,Q84V62_HEDHE/26-102)),(Q7S4C4_NEUCR/73-147,(Q8P513_XANCP/417-486,(Q87AG9_XYLFT/395-464,O34918_BACSU/58-127)))))),((((YDJM_BACSU/30-121,Q97TP0_CLOAB/118-201),(Y3177_SYNY3/1-87,((Q8KAS8_CHLTE/66-156,((RLPA_AQUAE/129-219,O67382_AQUAE/55-145),((((RLPA_HAEIN/69-159,RLPA_PASMU/68-158),((RLPA_HELPY/115-205,Q7M7V1_WOLSU/75-165),RLPA_CAMJE/77-167)),((Q7PBP9_RICSI/166-259,Q8F9X6_LEPIN/103-193),O51677_BORBU/44-134)),((RLPA_ECOLI/78-166,(Q7N763_PHOLL/72-162,RLPA_YERPE/75-165)),(RLPA_TREPA/27-117,Q7VKA6_HAEDU/76-166))))),((((((Q7MN13_VIBVY/80-170,(Q83CW5_COXBU/71-161,Q87C59_XYLFT/126-216)),((Q7W015_BORPE/84-174,Q7NPV8_CHRVO/99-189),(Q8XUC4_RALSO/94-184,(Q82T62_NITEU/105-195,((Q8G0U5_BRUSU/105-195,Q8UF98_AGRT5/115-205),Q89LM2_BRAJA/151-241))))),(Q87VW3_PSESM/103-193,Q8EHQ2_SHEON/98-188)),RLPA_NEIMA/59-149),(Q8KA94_CHLTE/70-164,Q9A7A1_CAUCR/66-156)),((((Q7U7N8_SYNPX/60-150,(Q7U4N9_SYNPX/113-203,Q7V582_PROMM/105-195)),((RLPA_SYNY3/227-317,Q8DLZ3_SYNEL/217-307),RLPA_ANASP/274-366)),((((Q98DT8_RHILO/32-119,(Q8FXW2_BRUSU/28-115,Q8UIK3_AGRT5/29-116)),Q89JS4_BRAJA/38-126),Q89X70_BRAJA/74-161),(Q7NLH5_GLOVI/257-347,Q89G77_BRAJA/82-168))),(Q87WR7_PSESM/28-118,Q9HVT6_PSEAE/31-121)))))),Q89QY0_BRAJA/43-149),Q9P8A6_AGABI/167-239)),Q93MF1_AMYMD/34-132,Q9X5U4_STRLA/36-135);
(((((((((Q9SDZ3_9FILI/63-148:0.23178,((((((Q84L77_PYRCO/65-150:0.10905,Q9SWD3_9CARY/17-94:0.15380):0.05804,(Q8S347_CAPAN/59-136:0.18489,EXPA5_ARATH/73-151:0.27773):0.03130):0.06028,Q8L9W7_ARATH/58-143:0.20402):0.04279,((Q84L40_MIRJA/67-154:0.19784,(EXPA2_ARATH/67-152:0.15464,(Q84L49_MIRJA/65-150:0.20760,Q9AYR1_EUSGR/33-120:0.17282):0.07535):0.05746):0.03407,((Q8LGS7_PHYPA/73-158:0.31033,(Q7XJA2_PHYPA/67-149:0.20406,Q84V44_PHYPA/67-150:0.27504):0.13461):0.06476,Q9ZTG7_LYCES/19-103:0.29472):0.10916):0.05426):0.03859,(Q7XJA5_MARPO/33-124:0.33718,Q9FYS9_9LAMI/22-113:0.28344):0.11674):0.06050,(((Q7X9Q2_SAMNI/65-153:0.13252,Q9ZP38_TOBAC/65-153:0.16310):0.07151,Q8LG16_ARATH/61-149:0.12471):0.14469,((EXPA7_ARATH/72-157:0.18981,EXP18_ARATH/66-152:0.15469):0.23063,EXP17_ARATH/63-151:0.12475):0.07170):0.12501):0.06804):0.09575,(Q946I1_ORYSA/65-158:0.19746,((Q7XUD0_ORYSA/67-153:0.08384,Q8LAT2_ARATH/75-161:0.41090):0.15491,(Q7XJA1_PHYPA/86-171:0.32902,(Q946I5_ORYSA/18-105:0.15257,EXP20_ARATH/65-152:0.29740):0.10989):0.08026):0.08999):0.06592):0.03457,(P93442_ORYSA/59-144:0.05610,(((Q8W2X8_ORYSA/72-160:0.18864,Q9SNH7_ORYSA/89-175:0.16821):0.07459,(((Q946H8_ORYSA/85-173:0.09714,(((Q8LMP8_ORYSA/84-161:0.08901,(Q9FY29_FESPR/64-151:0.16904,Q9FY28_FESPR/60-147:0.08596):0.04704):0.03815,Q7XE34_ORYSA/62-150:0.06059):0.04010,Q7XE35_ORYSA/59-147:0.12269):0.02332):0.03702,((Q946I9_ORYSA/59-146:0.07780,Q9FY31_FESPR/62-149:0.13320):0.05543,((Q9XHW9_ORYSA/62-149:0.11921,Q9XHX0_ORYSA/60-147:0.06603):0.05336,Q8H6F7_MUSAC/60-147:0.13761):0.04302):0.02586):0.04633,((Q8LMP7_ORYSA/65-153:0.07896,Q946H7_ORYSA/62-150:0.10643):0.04727,O24208_ORYSA/69-157:0.12384):0.01809):0.05026):0.05634,Q9FY30_FESPR/64-150:0.16047):0.02788):0.01742):0.05905,((Q8LKJ9_GOSHI/67-151:0.16838,EXP12_ARATH/62-146:0.18795):0.12079,(Q84V43_PHYPA/66-153:0.17877,Q84V45_PHYPA/65-152:0.19652):0.33618):0.07523):0.17063,Q8H276_ORYSA/110-180:0.24285):0.11888,((((Q7XCL0_ORYSA/68-146:0.13167,Q8LGS6_ORYSA/74-151:0.08795):0.07384,(Q8H274_ORYSA/71-148:0.29895,(((EXPR1_ARATH/62-139:0.34375,Q8H4Q7_ORYSA/61-139:0.29541):0.12729,O65013_PINRA/74-152:0.45699):0.07391,((Q8LC65_ARATH/58-137:0.21142,Q7XHJ2_QUERO/61-138:0.16070):0.08295,Q84L47_MIRJA/44-123:0.23785):0.17997):0.13243):0.13691):0.22501,((((Q84V41_PHYPA/70-157:0.35678,Q84V42_PHYPA/73-155:0.18902):0.28999,((Q7XCG7_ORYSA/80-159:0.12907,((MPAC1_CYNDA/56-135:0.10083,MPAL1_LOLPR/78-157:0.15947):0.07863,Q8H7T4_ORYSA/78-157:0.16720):0.04641):0.06763,(((Q84UA7_MAIZE/80-159:0.17773,Q94KT1_MAIZE/22-101:0.12366):0.02675,Q9FQ82_ORYSA/80-159:0.20743):0.02268,((Q9ZR84_WHEAT/77-158:0.18287,(O24230_ORYSA/68-147:0.05164,Q949I4_FESPR/69-150:0.21486):0.01405):0.03877,Q94LR4_ORYSA/92-171:0.11625):0.02687):0.06344):0.15583):0.04374,(Q7XT39_ORYSA/81-163:0.14128,(Q941I7_ORYSA/75-166:0.15256,((Q9FRU8_ATRLE/80-160:0.16521,(Q9AXE4_TOBAC/81-163:0.30294,Q84WA9_ARATH/69-151:0.22516):0.09780):0.11427,Q39802_SOYBN/84-165:0.26556):0.13075):0.19904):0.05443):0.05009,Q94KT0_MAIZE/117-199:0.15707):0.09387):0.05614,((Q8LBG2_ARATH/66-146:0.23380,EXPB1_ARATH/76-159:0.19782):0.14968,Q8LLL9_ORYSA/84-166:0.15470):0.14046):0.10623):0.12851,(Q9AF65_CLAMS/559-624:0.36919,((Q9ZP41_9ROSI/51-128:0.21154,(EXPR2_ARATH/45-121:0.23448,Q84V62_HEDHE/26-102:0.45779):0.11506):0.34356,(Q7S4C4_NEUCR/73-147:0.50731,(Q8P513_XANCP/417-486:0.04770,(Q87AG9_XYLFT/395-464:0.22163,O34918_BACSU/58-127:0.31624):0.20320):0.30419):0.10178):0.08271):0.10413):0.12215,((((YDJM_BACSU/30-121:0.73749,Q97TP0_CLOAB/118-201:0.41399):0.38878,(Y3177_SYNY3/1-87:0.46590,((Q8KAS8_CHLTE/66-156:0.23057,((RLPA_AQUAE/129-219:0.35252,O67382_AQUAE/55-145:0.26652):0.09924,((((RLPA_HAEIN/69-159:0.21857,RLPA_PASMU/68-158:0.22108):0.16274,((RLPA_HELPY/115-205:0.15645,Q7M7V1_WOLSU/75-165:0.25045):0.15314,RLPA_CAMJE/77-167:0.15536):0.07710):0.10421,((Q7PBP9_RICSI/166-259:0.23303,Q8F9X6_LEPIN/103-193:0.23782):0.07066,O51677_BORBU/44-134:0.24023):0.06691):0.09810,((RLPA_ECOLI/78-166:0.38554,(Q7N763_PHOLL/72-162:0.17396,RLPA_YERPE/75-165:0.23468):0.11592):0.20965,(RLPA_TREPA/27-117:0.36880,Q7VKA6_HAEDU/76-166:0.30484):0.06627):0.06058):0.10993):0.13716):0.06343,((((((Q7MN13_VIBVY/80-170:0.21874,(Q83CW5_COXBU/71-161:0.33866,Q87C59_XYLFT/126-216:0.23737):0.06670):0.10375,((Q7W015_BORPE/84-174:0.21967,Q7NPV8_CHRVO/99-189:0.15553):0.05905,(Q8XUC4_RALSO/94-184:0.29699,(Q82T62_NITEU/105-195:0.39052,((Q8G0U5_BRUSU/105-195:0.22747,Q8UF98_AGRT5/115-205:0.24182):0.08627,Q89LM2_BRAJA/151-241:0.21760):0.09746):0.05165):0.04685):0.02916):0.02750,(Q87VW3_PSESM/103-193:0.14006,Q8EHQ2_SHEON/98-188:0.33215):0.09506):0.04464,RLPA_NEIMA/59-149:0.22124):0.05133,(Q8KA94_CHLTE/70-164:0.26608,Q9A7A1_CAUCR/66-156:0.28933):0.04483):0.07782,((((Q7U7N8_SYNPX/60-150:0.26327,(Q7U4N9_SYNPX/113-203:0.18181,Q7V582_PROMM/105-195:0.23497):0.08975):0.11713,((RLPA_SYNY3/227-317:0.20688,Q8DLZ3_SYNEL/217-307:0.18806):0.07744,RLPA_ANASP/274-366:0.29437):0.08949):0.08276,((((Q98DT8_RHILO/32-119:0.09263,(Q8FXW2_BRUSU/28-115:0.12805,Q8UIK3_AGRT5/29-116:0.24115):0.10621):0.12992,Q89JS4_BRAJA/38-126:0.44546):0.04852,Q89X70_BRAJA/74-161:0.22574):0.08528,(Q7NLH5_GLOVI/257-347:0.22220,Q89G77_BRAJA/82-168:0.30459):0.08435):0.06176):0.06129,(Q87WR7_PSESM/28-118:0.25014,Q9HVT6_PSEAE/31-121:0.17741):0.09351):0.15730):0.07465):0.12235):0.08168):0.09970,Q89QY0_BRAJA/43-149:0.58445):0.14338,Q9P8A6_AGABI/167-239:0.60297):0.22514):0.31471,Q93MF1_AMYMD/34-132:0.14292,Q9X5U4_STRLA/36-135:0.38095);