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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF03328 - HpcH_HpaI)
HpcH/HpaI aldolase/citrate lyase family
(
Pfam
reference: accession no.
PF03328
)
(
Interpro
reference: accession no.
IPR005000
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
22 sequences @ 267 aa
(ave. pairwise identity: 0.30)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 13.07)
nucleotides
(available for above)
21 sequences @ 801 bp
(ave. pairwise identity: 0.42)
New Hampshire format
(total tree length: 9.35)
amino acids, restricted set
(corresp. to available nt seqs)
21 sequences @ 267 aa
(ave. pairwise identity: 0.29)
New Hampshire format
(total tree length: 12.90)