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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03294 - Pox_Rap94)
RNA polymerase-associated transcription specificity factor, Rap94
(Pfam reference: accession no. PF03294)
(Interpro reference: accession no. IPR004974)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 832 aa
(ave. pairwise identity: 0.45)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.37)
nucleotides
(available for above)
5 sequences @ 2496 bp
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 2.31)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 832 aa
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 3.37)