EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03239 - FTR1)
Iron permease FTR1 family
(Pfam reference: accession no. PF03239)
(Interpro reference: accession no. IPR004923)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 423 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 15.41)
nucleotides
(available for above)
12 sequences @ 1269 bp
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 8.58)
amino acids, restricted set
(corresp. to available nt seqs)
12 sequences @ 423 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 14.77)