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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03178 alignment
(13 sequences with 360 aa)


Q06632_YEAST/987-1287 EGFQSGILLINPKSWKVID--KIDFPKNSVVNEMRSSMIQINSKTKRKREYIIAGVANATTEDTP--........-PTGAFHIYDVIEVVPEP............GKPDTNYKLKEIFQEEVSGTVSTVCEVSGRFMISQSQKVLVRDIQE.----DNSVIPVAFLDIPVFVTDSKSFGNLLIIGDAMQGFQFIGFDAEPYRMISLGRSMSKFQTMSLEFLVNGGDMYFAATDADRNVHVLKYAPDEP------------------NSLSGQRLVHCSSFTLHSTNSCMMLLPR-----NEE.....FGSPQVPSFQNVGGQVDGSVFKIVPL-SEEKYRRLYVIQQQIIDRELQLGGLN
O74733_SCHPO/1071-1376 MANTGSLDLVSPLTWTVID--SYEFQQFEIPLSVALVNLEVSETTKLRKPYIAVGTSITKGEDIA--........-VRGSTYLFEIIDVVPQP............GRPETRHKLKLVTREEIKGTVAVVCEVDGYLLSGQGQKVIVRALED.----EDHLVGVSFIDLGSYTLSAKCLRNLLLFGDVRQNVTFVGFAEEPYRMTLFSKGQEALNVSAADFLVQGENLYFVVADTSGNLRLLAYDPENP------------------ESHSGERLVTRGDFHIGNVITAMTILPKEKKHQNAE.....YGYDTGDDFSCVMVNSDGGLQMLVPI-SDRVYRRLNIIQNYLANRVNTIGGLN
CPSF1_HUMAN/1070-1377 QQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT--........-CRGRILIMDVIEVVPEP............GQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRA.-----SELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAK------------------ESFGGMRLLRRADFHVGAHVNTFWRTPC----RGATeglskKSVVWENKHITWFATLDGGIGLLLPM-QEKTYRRLLMLQNALTTMLPHHAGLN
DDB1_SCHPO/730-1005 QRLLSFLRVYEKNTLSEIA--HHKFNEYEMVESII---LMN----DD--KRVVVGTGFNFPDQDA--........PDSGRLMVFEMTS-----............-----DNNIEMQAEHKVQGSVNTLVLYKHLIVAGINASVCIFEYEH.-----GTMHVRNSIRTPTYTIDISVNQDEIIAADLMKSITVLQF--IDDQLIEVARDYHPLWATSVEILSERK---YFVTEADGNAVILLRDNVSP------------------QLSDRKKLRWYKKFYLGELINKTRHCTFIEPQDKSL.....---V---TPQLLCATVDGSLMIVGDA-GMSNTPLLLQLQDNIRKVIPSFGGLS
Q21554_CAEEL/777-1064 PNTTSSFMVLDQNTFQVLH--SHEFGPWETALSCISGQFT-----NDSSTYYVVGTGLIYPDETE--........TKIGRIVVFEVDDV----............----ERSKLRRVHELVVRGSPLAIRILNGKLVAAINSSIRLFEWTT.----DKELRLECSSFNHVIALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSQWMVTCEFITAES---ILGGEAHLNLFTVEVDKTRP-----------------ITDDGRYVLEPTGYWYLGELPKVMTRSTLVIQPE-DS.....---IIQYSQPIMFGTNQGTIGMIVQI-DDKWKKFLIAIEKAIADSVKNCMHIE
DDB1B_ARATH/754-1041 ESESHFVRLLDAQSFEFLS--SYPLDAFECGCSILSCSFT-----DDKNVYYCVGTAYVLPEENE--........PTKGRILVFIVE------............-----EGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWML.RDDGTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDI---YLGTDNCFNIFTVKKNNEGA------------------TDEERARMEVVGEYHIGEFVNRFRHGSLVMK-LPDS.....---DIGQIPTVIFGTVSGMIGVIASL-PQEQYAFLEKLQTSLRKVIKGVGGLS
Q9XYZ5_DROME/786-1070 EIDVHNLLVIDQNTFEVLH--AHQFVAPETISSLMSAKLG-----DDPNTYYVVATSLVIPEEPE--........PKVGRIIIFHYH------............-----ENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWTN.----EKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDT---FLGSETNGNLFVCQKDSAAT------------------TDEERQLLPELARFHLGDTVNVFRHGSLVMQNVGER.....---TTPINGCVLYGTCNGAIGIVTQI-PQDFYDFLHGLEERLKKIIKSVGKIE
DDB1_CERAE/785-1069 EVEVHNLLIIDQHTFEVLH--AHQFLQNEYALSLVSCKLG-----KDPNTYFIVGTAMVYPEEAE--........PKQGRIVVFQYS------............-----DGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTT.----EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDN---FLGAENAFNLFVCQKDSAAT------------------TDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET.....---STPTQGSVLFGTVNGMIGLVTSL-SESWYNLLLDMQNRLNKVIKSVGKIE
Q23865_DICDI/770-1077 DEEVSYIRIYNDQTFELIS--SYKLDPYEMGWSITPCKFAG----DDVNTYLAVGTSINTPIK----........-SSGRVLLFSLSSSSSSNdkdsldnnnnnnNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFSIRYTHsKEKNCKVISSESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQIARNPQPIWIRSVAMINDDY---FIGAEASNNFIVVKKNNDST------------------NELERELLDSVGHYHIGESINSMRHGSLVR--LPDS.....---DQPIIPTILYASVNGSIGVVASI-SEEDFIFFSKLQKGLNQVVRGVGGFS
Q9UTT2_SCHPO/851-1149 KSWVSFISVFDMISKKIIH--ESPLGDNEAAFSMTAAFFKNRD-----EFFLVAGSATNMDLECRTC........-SHGNFRVYRFHD-----............----EGKKLELISHTEIDGIPMALTPFQGRMLAGVGRFLRIYDLGN.----KKMLRKGELSAVPLFITHITVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDT---LAGGDKFGNIWLLRCPEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQLV-------.....----EGAREVLLWTGLLGTVGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRD
O44985_CAEEL/854-1162 GKWASAISLISATSGDKLS--YFELPQDENAKCVALVQFSKHPN---E-AMVLVGCGVNEVLNVHDIdpndtsirPTRGCVYTFHLSA-----............----NGDRFDFLHRTETPLPVGAIHDFRGMALVGFGRFLRMYDIGQ.----KKLLAKCENKNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHT---VAVADKFGNLAVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVSNFFIGDTITSLQKTSLM-------.....----PGANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRD
SF3B3_HUMAN/860-1159 GQWASVIRVMNPIQGNTLD--LVQLEQNEAAFSVAVCRFSNTGE---D-WYVLVGVAKDLILNPRSV........-AGGFVYTYKLVN-----............----NGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGK.----KKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDT---VAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------.....----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRD
RIK1_SCHPO/708-979 YKENYHLELVDSYDDNSFR--VFSFTENERC----------EKVLKINESSLLVGTSIIEQDKLV--........PVNGRLILLEFEK-----............----ELQSLKVVSSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKLTE.----ER-LMIDSRISLGSIVLQLIVEGNEIAIADSIGRFTIMYFDGQK--FIVVARYLFGENIVKAALYEGTV---YIIATNSGLLKLLRYNKDAK------------------NFNDRFICESV--YHLHDKVSKFQNFPITNT-----.....---NSFLEPKMLFATEIGAIGSIVSL-KDKELELEELTRKIRKLKFSYLSSMD