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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03170 alignment
(7 sequences with 661 aa)


O67400_AQUAE/1-574 MALSFSQTTSVKLSEFLGKN-VLDLKGMDARGKLSFPVNPLWNVEKIKFYIYYKASPVLKSERSEITLLLNGKVITSRQIK----DEGLITVE---IEN-PKLFDFNTLTFKASQHYCINCCENENSPELWTQIDLKKSYIQFQYTKKPFPENLAFLKDIYLSERLLS--PVEIDILTD-KGSNRLLTAGAIFSGYLGAKIKYRRIYVNYTEN-LRAKDTVVIGTQDFVSRVIGE-R--VSGNIYVTQNPKD---KSKFLLVFTGRDEKEILNAVRAFILTPSSYLSEKFVYVSDVV-LPEIKAYSSPVLLAPGEEITLRKIAG--GDVVVRGYAG-RFDFSFFIPPDLMLNPK-EKLRLKLFYNHGLLVREG--STINLYINGKFVYSIPVDPY--DKSDLKVR------------EVLIPTSVLNK----GFNVLTVESALV-PN---KEDFCAAANF--ESLKVIIYGNSLISLPDLVHWTKMPNLVYFISTGFPFTTY-PDMKDAAVLVESTDGETLSSMFTLLAFIGTKIQFPPLRLSVYVDRLPNDVAQSKDVIVFWNRNSLI--KKQI-LNSLDSVVLVKG---------------------KLFEEDQKEFSVNLRK------------RDYVFTMAMRESPFKPKRTILVLN
ACSA2_ACEXY/876-1489 VADGEI-TRTSTFRDLGLATGPLTLRGFSPLQGLDVIVPANRVVTRARITLSGALSPSLLPEASAVSVTLNEQYVGTIRVDPEHPRFGPITFD---IDP-LYFTGDNKLNFHFAGEYRR-DCNDLYNEVLWARISDFSTVTLTTTRIAPDRK-LSYLPAPFYDPNLRT--PLRVPVVMPNPDAHGMLKASALVASWFGKLADFRKVSFPVSTTIPASGNAIAIGENLPIDARGTR-P--TGPTLSEVENPND---RLGTILVLTGRNAQEVEVAARVLAFSSDTLGAVGTKVVNDVT-LQPRHPYDAPAFVPTDRPVRFGELVA-ASDLQGGGFAPPVMALPFHLPPDLYSWRNRPYPIDLWVRTPGGPVVDLETSRLDVHLNNNYLDSFTLKPP-SLWAAWSER------LVNQHAGAVEHAAALPPWLLFGQNQLKFSFDAR-PI---DRGVCRRTPD--DIHMSVDSD-SWLDFRRGYHFARLPNLSYFAEAAFPFSRMADLSETTVVVPHHIDAGTAGTFMDLMGFFGATTWYPASGVQVADINDLSEHPPQGDILILATAGDAP--KFEE-LLTRAPYELTDGHIR----------VGQHMGLQGIWYLFQDHDHAGLQD--GVQANLNAPIAG-AGVLLGAQSPYRSDRSVVALM
BCSA5_ACEXY/802-1416 ISDAEV-TRTLTFRNLGATTGPLTLRGYSPLQGLDVVVPANRVVTHAQLTLSGALSPSLLPEANAVTVTLNEQYVGTLKVDPQHPQFGPVSFD---IDP-LYFTGDNKLNFHFAGEYRR-DCNDLFNEILWARISDMSRITLTTVRITPERK-LSRLPAPFFDPNQRS--TLRVPVVLPATGDRGALRAAGLVASWFGRIADFRKLSFPVSTTIPASGNAVEVGVNLPVDAEGGR-P--AGPMLAEVANPND---RWGTVLVVTGRTAQEVEVAARALVFSPDTLGGVASKVVSDVS-LETRHPYDAPAFVPTDRPVRFGELVG-AADLQGGGFAPAGMTLPFHLPPDLYTWRGRPFLMNMWVRAPGGPVVDLETSRVDVSLNNNYLQSYTLSPP-GLWRKWSER------LVNQHAGAVGHVTALPPWLLFGQNQLQFNFDAR-PI---DRGACRRTPG--DIHMSVDSD-STLDFRRGYHFAEMPNLSYFAEAAFPFSRMADLSETTVVLPDHPDTGTTGAFLDLMGFFGASTWYPAAGVTVMGADEVAQTPPKGDIVVLGTAAQLGG-AASG-LLARSPYVIHDRHIT----------VGQRMGLQGIWYLFQDHDHAGLKD--GVTANLNAPIAE-AGVLLAAQSPYDSQRSVVAFT
BCSB1_ACEXY/84-699 ASDVAT-VHTYSLKELGAQS-ALKMQGAATLQGLQFGIPADQLVTSARLIVSGAMSPSLQPDTSAVTITLNEQFIGTLRPDPTHPTFGPLSFD---INP-IFFITGNRLNFSFASSSK--GCTDPSNGLLWASVSEHSELQITTIPLPPRRQ-LSRLPQPFFDKNVKQ--KIVIPFVLAQTFDPEVLKATGILASWFGQQTDFRGVTFPVFSTIPQTGNAVVVGVADELPSALGR-QAVNGPTLMEVANPSD---PNGTVLLVTGRDRDEVITASKGIGFGSSALPTANRMDVAPID-VGARVAYDAPSFIPTNRPVRLGELVP-DSALQAQGYAPGALSVPFRVSPDLYTWRDRPYKLNVRFRAPPGPIVDVSRSSLNVGINDTYLEAYPLREPDSTLDQILRRV----GLGRGDDSVQKHTMPIPPYRVFGQNQLLFYFEMA-AM---AEPGCKPGPS--TFHMSVDPD-STIDLSNSYHITRMPNLAFMASAGYPFTTYADLSRSAVVLPDHPNGMVVSAYLDLMGFMGATTWYPVSGVDVVSSDHVNDVADR-NLIVLSTLANSG--DVSQ-LLSKSSYQISDGRLH----------MGLRSTLSGVWNLFQD-PMSGISN--TAPTDVESTLTGGVAAMIEAESPLASGRTVLALL
BCSB_ECOLI/65-681 AQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVT--KEQLGKKTLAQMPINP-LFISDFNRVRLEFVGHYQD-VCEKPASTTLWLDVGRSSGLDLTYQTLNVKND-LSHFPVPFFDPSDNR--TNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPVIEMINHPQN---PYVKLLVVFGRDDKDLLQAAKGIAQG-NILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDS--SRMDISLNNQFLQSFNLSSK-QEANRLLLRIPVLQGLLDGKTDVSIPALKLGA-----TNQLRFDFEYMNPMPGGSVDNCITFQP--VQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDA-DIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMR-------------QTPFPGIVPDESD-RAAETRS------TLTSSGAM--AAVIGFQSPYNDQRSVIALL
Q9X572_RHILE/100-710 NSVAP--LRAGDVRRFVVPFSKLGLGGEYDRRSWSVYLTPEQAAAQGKLHLPYQNSIVVAPEASALTVYLNNRPIGQQRVC-SPDGSSAVTFE---VPPGLLQPGANLVTFEANQRHRT-DCSIQSTYELWSNIDPAGTYLSFAGRDAAQLPSADAIRAIGVDGAGKTEFDIVVPALEQPGTTKPLLRLAQGLSVLSSMPNQIFAFNTASLPVGGPGKLSVLVGTAAELRPLFPD-LPPGAESAALAAFVTD-PRSGSPVLLISGPSWQAVSSAIDTIVSPTDRSSEVRRDVLT----TERWSAPNAP-LVFSDTNIALSQLG-----VKTTEFSGRRLRTSFNIAVPADFYAN-AYGEAKVLLDAAYTDNVMPGSHIDIYVNDNIASTVPITTT----SGGILR----------HLPIRVTMRHFKP----GLNSVAIEAILM-TK---DDAACAPGSTAGSTARFALFDTSELQIPDFARVGQRPNLAAMAGTAYPYG---RATEPTPLFIDRIDADTLSAAATLLGQMAITAGHPIAVETVASP---NTIGDR-DAIFIGSISQMPATALTQ-TNISAASQPSWRPVPDTQAGVVDTGTAFEEWNSKVSGGVLRSRITAFREWLSRNFDISRSSLQFIPGAEQIFTPANADTLLVAQG
Q44417_9RHIZ/105-698 PAPASS-LNADSRRRYILPYEKLSLSGEIDRRQWSIYLTPEQANAAVSLNIGYQNAIVVAPESSNFQVSLNNVALDAARIE-APDSEGNVALK---IPPGVLQVGSNVVTLGVQQRHRT-DCTIQSTYDLWTDVNPANTYIGFNSDVAGSFANIDDIQATGPDGKAMTSIEIVAPALGNPAFADSLLRLSQALALRTQMPNQTIRFVTAPSTERKAGTLTVFVGTAREIAGVAGA-LPPEASAGAFAGFGNAGPGNSSP-LFVTGPTPQAVQAAIETLFSSISRTPGAQRTTFS----TRSWHAPDVP-LVMSDRRIALSELG-----LQSTEFSGRRFRTEFYVGMPADFYAS-AYGEASLLLDAAYSSQVLPGSHVDIYVNDQIASTVPISNN----GGGIFR----------HLPIKVTMRHFKP----GPNKVTLEAVLM-TA---QDQACAPGAPASATPRFALFDTSEIHIPNYAQIGRKPDLAAMAGAGQPY----RTGGPVALSLDRFDTDTMSVAATLISRLASVAGHPIDIETVASP---LVIGDR-DALFVGTISQFPQALISQ-FNLVPSSQISWK-----------MGTGVQVPAPKQRHPVQR--LAGAGGWR----HLGGPGLLLRGVDEAEFRSELGYAALPAGG