EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03137 - OATP)
Organic Anion Transporter Polypeptide (OATP) family
(Pfam reference: accession no. PF03137)
(Interpro reference: accession no. IPR004156)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 746 aa
(ave. pairwise identity: 0.30)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.89)
nucleotides
(available for above)
15 sequences @ 2238 bp
(ave. pairwise identity: 0.42)
New Hampshire format
(total tree length: 7.64)
amino acids, restricted set
(corresp. to available nt seqs)
15 sequences @ 746 aa
(ave. pairwise identity: 0.29)
New Hampshire format
(total tree length: 11.51)