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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03130 alignment
(224 sequences with 40 aa)


YPGR_BACSU/313-339 VRWRAAMFLYEVGD.............ESAIEALRAAEDD
RPCF_SYNPY/115-150 VRRSAARGLAELNLiype....drsklERCLLALLAAIKD
YCPZ_PSEA9/79-113 VRSSAAKALAQVVIchpdepls.....EEGVQGLKAALQD
P71325_FREDI/80-114 VRGSAAKALAQVAInhpdvpfa.....AEGVQGLKTALDD
Q9RJS9_STRCO/191-217 VRARAVRALAELSG.............VEATARLRHALDG
YCPY_PSEA9/355-381 SRAAAAIALAEIGD.............PRAIPEIKSCLTA
P71324_FREDI/355-381 SRAAAAIALAELGD.............PKAIPELKACLET
O27750_METTH/224-250 TRAMVVEALGEIGS.............RRAVPRLKGMLAG
Q9Z3G5_SYNP7/146-172 IRTAAVAALGELGD.............ERAVPLLLPLVSD
P72807_SYNY3/148-174 IRTAAISALGELGN.............PEALPLLASLVQD
RPCE_SYNPY/102-128 VREESARSLGMIQA.............KAAVQDLCELLSG
O27431_METTH/85-111 VRYACALALGILGD.............EDSIPDLEELLDD
CPCE_SYNY3/98-124 VRESAAQALEGLGD.............ARAMAPLMAKLTG
CPCE_SYNEL/108-134 VREAAAIALGQLGD.............PRAIAPLQSLLEG
CPCE_SYNP7/99-125 VREAATQSLGELQA.............TVAVPALLKLLEG
CPCE_SYNP2/98-124 VRESAAQSLEMLGD.............RQAIPALQALLAG
CPCE_ANASP/104-130 VREAAAQSLEMLKD.............KTAAPALIKLLDG
CPCE_PSEA9/100-126 VREAVAQSLEMLGD.............NSCVPYLIELIKN
CPCE_FREDI/118-144 VREAAAQSLEMLGD.............SSSIPRLIELLND
PECE_MASLA/97-123 LREAVIQALAMIGD.............RRAVHPLVQLLQS
PECE_ANASP/93-119 LREAVICSLAAIGD.............KRAVTPLLNLLQS
RPCE_SYNPY/30-58 DQYYAAWWLGRMRSr...........hPESLPLLLAALAP
O85493_9SYNC/31-59 SRYYAAWWLGRFRVr...........ePEAISALMTALAD
CPCE_SYNP7/28-56 DRYYAAWWLGRFRMk...........qPEAIALLIEALDD
CPCE_PSEA9/29-57 LRVYAAWWLGRFRVn...........vPEAIDLLIAALAD
CPCE_SYNY3/27-55 ARYYAAWWIGRFRAa...........qPETIAALLVALED
PECE_MASLA/27-53 IRYYAAWWLGKHQV.............QAGCAALCEALFD
CPCE_SYNP2/27-55 KRYYAAWWFGKFRVqd...........ERAVNALLAALKD
CPCE_SYNEL/31-65 LRYYAAWWLGKFGLetat.....aaerQAIVSALIAALAD
CPCE_ANASP/33-61 LRYYAAWWLGKYRVk...........eSAAVDALIAALED
Q9ZNK2_CLOHI/142-168 LRRLAISALGKLEN.............LKGESALIRALED
PECE_MASLA/65-91 LRRQAARALGQLKN.............PQAVPALIAALAC
CPCE_SYNEL/77-103 LRRNAARALGKLGD.............RQAVPALIECLRC
CPCE_FREDI/87-113 LRRNAARALGKLGE.............KRAVPALIKALEC
CPCE_SYNP7/68-94 LRRNAARALGKLES.............PEAIAPLIACLQC
CPCE_SYNP2/67-93 LRRNAAKALGKLGN.............LAAVQPLIESLES
Q44295_9NOST/91-117 LRWFAARILGELQH.............PEAIMPLVELLKT
PECF_MASLA/126-160 VRRIAARGLGKIGStvkd.....revtDRAIEKLHWALVT
P97030_BACSU/381-407 IRGTAAWAIGKIGD.............PAYAEELEKALEK
O27750_METTH/259-285 VRGKVAEALGRIGD.............PAALEDLHMALRD
O27750_METTH/70-96 VRAAAARALGKIGN.............PSAVKPLLRALED
P74284_SYNY3/125-151 VRFSAAVALGNLKD.............IRAQTVLLEALKS
P72742_SYNY3/114-140 VRKGLVWALGNCGD.............RRALAPLIHALKT
P72742_SYNY3/82-108 VRVSAAYALGRNTD.............PTIVEPLIQSLQT
P72742_SYNY3/51-77 QRMLAARAFCEIAD.............RRAVEPLINLLGD
O26289_METTH/38-64 IRGAAAWIIGNFQD.............ERAVEPLIKLLED
O27834_METTH/106-132 VRKFAARSLGELGD.............LRAVEPLIAALDD
O27431_METTH/23-49 VREDAVELLAEVAD.............PRAVGPLIEALDD
O27431_METTH/54-80 VREAAALALATFDD.............RMAVEPLREHLSD
P74284_SYNY3/93-119 IRADAAGALGYLED.............ERAFHPLCRAFYE
YCPZ_PSEA9/48-73 YRRAAVKTLGAIGH.............-ASVTPLVAALLN
P71325_FREDI/49-74 YRRAAVKALGAIGP.............-DAITPLVQALLN
Q9S332_PROMA/90-116 TRRAAAKTLKLVGD.............PSALPDLLEALIN
MPEV_SYNPY/93-119 VRRAAAKTLTLIED.............PNSLPDLVSAFLN
MPEU_SYNPY/90-116 IRRASAKTLNIIGN.............KKALPNLIEAFES
Q9S332_PROMA/59-84 LRRTFSESLGAIGP.............-ASIPELREALLK
MPEV_SYNPY/62-87 LRLRFADSLGSVGQ.............-AAVPALCNAMLS
MPEU_SYNPY/59-84 LRLTFAKSLGSIGE.............-DAIPILCEALKN
YPGR_BACSU/282-308 VRRTAGDCLSDIGD.............PQAIPAMIKSLSD
O27834_METTH/75-101 IRRYATFALKKIGD.............PRVTDHFIEALSD
O27750_METTH/194-219 VRRHILLAVVNMGE.............-YAVDPLLEKLSD
O26289_METTH/8-33 VRRDVSTALSRMGD.............-EAFEPLLESLSN
P72742_SYNY3/183-217 VRSNCAWAVGQLCRelps.....nvvyATAIDALLEALVE
YPGR_BACSU/251-277 IRRQAVVYLGMIET.............PDVLPLLYKALED
P74284_SYNY3/61-87 VRSMAVFALGIKQT.............EECYPILVKLLET
YCPZ_PSEA9/118-143 VNIASVMAMGEIGA.............-PVVHLLIEALQT
P71325_FREDI/119-144 VHIAAVMALGEIGS.............-PVVDVLIEALQT
P74527_SYNY3/739-765 LRLAAIRALGAVSI.............GQSPEKLTEILER
P74527_SYNY3/665-698 AEAAAATALGALGTgll......knneGEIIQQLTEVLKN
P74527_SYNY3/568-594 ARIQAAIAIGKQGG.............LEAVEFLGERLQK
MPEU_SYNPY/219-246 VRAEAAIIVGKSMD............qEEGAHQLHELLKD
YJ40_YEAST/268-294 VRHEAAEALGAIAS.............PEVVDVLKSYLND
Q17949_CAEEL/92-118 VRHEAGEALGAIAD.............PSVKDVLRKYAQD
Q9V9U4_DROME/87-113 VRHEAAEAMGAIGH.............PDVLPILEEYKQD
Q9V9U4_DROME/239-265 VRHECAEALGAIAT.............EDCIQILNRYAED
Q17949_CAEEL/243-269 VRHECAEALGAIAN.............EECTEILKQYVND
O75265_HUMAN/133-159 VRHECAEALGAIAR.............PACLAALQAHADD
YJ40_YEAST/110-136 VRHEAAEALGALGD.............KDSLDDLNKAAKE
O43977_BABBO/103-129 VRHEAAKAIAAIGD.............KTYIDKLEKYKDD
O43977_BABBO/273-307 ARHEAALALGSCAAasnn.....qsdrNRIIAALEAHKLD
Q55283_SYNSP/143-169 WRSQAATALGAARD.............SSSRLHLQQLCLD
MPEV_SYNPY/222-249 IRAEVATLLGAMED............tDWAKLLLISNLDD
Q46749_ECOLI/144-170 VRRATAFAISVIND.............KATIPLLINLLKD
P72742_SYNY3/145-177 VRLWSASSLPNIAKlay.......edvIATIPPLIEGLRR
Q44295_9NOST/59-84 QRWDIAKVLVNLGN.............-VTINPLIDILED
P74527_SYNY3/600-626 VRVEIAEQLAGINL.............EQAGTALINGLDK
Q9RJS9_STRCO/222-248 VRGYAALALGSRGA.............GEAVPTLVDMIVA
CPCF_SYNP7/161-185 VRYAAAAALETLAP.............--AATQLQSAIAE
CPCF_SYNEL/112-151 VRRAATKALGTLRWqlipeetvreaqlKEALAVLQRNSKA
CPCF_SYNY3/119-157 VRRAAAKGLGFLRWqslpqe.eqetvqKAIYDTLIQVCED
CPCF_SYNP2/111-137 VRRSAAKGLGNIQW.............HKVPDSEREVQQQ
CPCF_PSEA9/113-151 VRRAAVKGLGTMKWhwfpde.lreiaqEEALDALLFVAQQ
P74527_SYNY3/632-658 VRRAIISALAKVKT.............EASYEALKKCLTQ
CPCF_SYNP7/117-155 VRRAATYGLGRVRWadlses.drlaqqQQCYETLKLCLQY
O27834_METTH/45-70 VRFKAAEKLAEFGE.............-ASLEKLMEIMDT
O27834_METTH/16-40 KRMEAIEKLEPSEE.............--SVEILIAFLED
Q9S332_PROMA/184-214 VRASCIAALGEQTQtl.........cdLQAKNIITNALND
Q44295_9NOST/182-208 IRAAAIEALSSFHD.............QRVPPILLNALND
MPEU_SYNPY/184-214 IRIAALNALAEQAQks.........enKDVQALILNALKD
Q46749_ECOLI/208-234 VRIEAIIGLSYRKD.............KRVLSVLCDELKK
O27750_METTH/163-189 VRKTAAKVIRRFGD.............KRCLEVLLDNLND
YJ40_YEAST/235-261 FKHEIAYVFGQIGS.............PAAVPSLIEVLGR
Q9V9U4_DROME/206-232 FRHEVAFVLGQLQE.............PCSIPFLQENLED
Q17949_CAEEL/210-236 FRHEVAYVLGQLQS.............PVATQELKDRLLL
O75265_HUMAN/100-126 FRHEVGYVLGQLQH.............EAAVPQLAAALAR
O15781_BABBO/192-218 FRHECAFVLGQMQS.............MAAADHLLKCLSN
YJ40_YEAST/77-103 LKHEVAYVLGQTKN.............LDAAPTLRHVMLD
Q9V9U4_DROME/54-80 LKHELAYCLGQMQD.............AQALDILTKVLKD
Q17949_CAEEL/59-85 LKHELAYCLGQMQN.............KHAIPTLVSVLED
O43977_BABBO/70-96 LRHEIAYVIGQAEC.............EEAADVLVRLLED
Q44295_9NOST/353-379 MKSAIALSLGQLGN.............AEATESLTMLSTD
RPCF_SYNPY/83-109 SRAWVVRALASIRD.............PRSLDLLEHALAT
CPCF_SYNY3/87-113 ARAWATRACAGIGD.............PRALALLQEAALT
CPCF_SYNP2/79-105 ARAWMLRIFAGIGD.............PRALDLLIEAANK
CPCF_SYNP7/85-111 ARAWALRALAGIGE.............PAALPLLLSAARE
CPCF_PSEA9/81-107 ARAWAIRALAGIGD.............PRGLVTLLGVATA
CPCF_SYNEL/80-106 ARAYGVRVLGSIGH.............PAALQVLLAAAQS
PECF_MASLA/90-116 FQAWIIQALAMIGD.............AKAFDLLAEVVGT
Q55283_SYNSP/238-264 GRTEALAALADART.............TEALTRLSRLTTT
Q55283_SYNSP/112-138 ERTWLLPALASSQD.............PALLTQLRDLSSD
Q44295_9NOST/151-177 TRLLAVRSLAYIRH.............TQTIAPLLSVVQD
PECF_MASLA/166-192 LRYAAVVSLQEIAT.............PQAHAVLSAAVAG
Q9Z3G5_SYNP7/177-203 IRHRLAQALHRFTH.............PDAQAALAQLSQD
P72807_SYNY3/179-205 VRYRLALAVGHLEH.............PDRQSLLQQLAQD
Q9RJS9_STRCO/289-315 ARGRLTQALAGIPG.............TRASSALAELSRD
P74284_SYNY3/187-213 IRQRLVEALGNLPC.............DQSRSALTFMVKD
RPCE_SYNPY/179-206 IRASALRALLLLTG............eQAWAPPLIELLQH
PECF_MASLA/21-52 SPADALCAIAAISDse........tteVAVISALLQLLSR
RPCE_SYNPY/71-97 VALNAIRALGILQA.............RSAEEDLRSLLKN
Q55283_SYNSP/300-326 RPADCLYSLKQLDD.............RSALSQLRSLLNT
P97030_BACSU/349-375 IQRNAILALAHFKD.............ASALPELTELMHK
RPCF_SYNPY/53-78 VASVATSGLIELGS.............-QAVPSLLVSLDE
CPCF_SYNY3/57-82 AAVAAVDGLIQIGD.............-AAMTHLLANMDG
CPCF_SYNP2/49-74 AAVAAVNGLINIGE.............-AVVPYLLENVDG
CPCF_SYNEL/50-75 AAQAAVEGLIALGD.............-AVVEPLLAQLDG
CPCF_PSEA9/51-76 AAVASVDGLILLGS.............-AAVPPLLELLDM
CPCF_SYNP7/55-80 AAVVAVDGLIQLGS.............-PAAQAILNNLDD
PECF_MASLA/59-84 VATAAVEVLVKLAP.............-ASVEPLLAAFRS
O27834_METTH/137-163 VKLAAVRSLGDLGD.............ERAIEPIKKARRK
RPCF_SYNPY/22-48 ELIRATKNLCDLRT.............IEAIPILIEGLGF
CPCF_SYNY3/26-52 KLVGAVRALAATRS.............PLAVPQLTTVLRY
CPCF_SYNP7/24-50 GLVRAVAALSAART.............DAAIPTLISVLAF
CPCF_SYNP2/18-44 DLVKNVAQLAATKD.............EQAIPTLVEVLKF
CPCF_SYNEL/19-45 ALREAVIQLAQQNS.............TAAIPTLIAVLGY
CPCF_PSEA9/20-46 LLLEAVQNLAAARL.............EGAIPILIEALSY
YCPY_PSEA9/32-58 SRYIAASHLVNFNS.............ERSIAALMRAIHH
P71324_FREDI/32-58 SRYIAASHLVNFPT.............ERSINALIRAVQQ
O27750_METTH/31-57 VRREAAVALERMAD.............ERSADALMDALRY
O27750_METTH/101-127 VKIGAMRSLSEFPS.............EESLRAIEKFVDH
O26289_METTH/69-95 VRSGAARSLEQIGG.............ERVRAAMEKLAET
Q9Z3G5_SYNP7/48-77 VRYAAVSQLSNLGRh..........drDQARTILLDRLEN
P72807_SYNY3/50-79 IRYAAVSQLDPVGKa..........dlEQSLQLLRDRLFN
CPCF_SYNY3/162-190 VRYGAIAGLENLAKq...........aQHYRQPLKDFLQS
CPCF_SYNP2/154-182 VRYGAIAGLEGLSQa...........iPEARKIVIKNKLT
CPCF_SYNEL/156-182 VRYAVGVALDYLHQ.............QAAARGIREAVRS
Q9Z3G5_SYNP7/83-109 VQAAAADALGALRF.............TDVYPALEATYQQ
P72807_SYNY3/85-111 VQSVAADVIGGLKL.............TAAYPDLQKAYEE
Q9S332_PROMA/219-245 VQIEAIRLIGALNE.............EDWDLDLLASKLS
Q44295_9NOST/281-307 LQLEIIRALVWLES.............LISLEYLQQAFNQ
PECE_MASLA/159-186 VQCAAARYLYLLTK............qPQYLERIVQNLNH
PECE_ANASP/155-182 VQCAAARYMYLLTQ............eSEYIERIVKNLNH
CPCE_SYNY3/172-199 VQYAAARALFQLTG............dNRYGDLLITALGG
CPCE_SYNEL/182-209 VQFAAARALFQLTG............dAVYGDRLLAALNS
CPCE_PSEA9/171-201 VQYAAARAMYQLSEpm.........vaDQYGDRLVAALAN
CPCE_FREDI/192-224 IQYAAARAMYQLTSest.......agyNQYGDRLVQALAQ
CPCE_ANASP/178-205 VQCAAARAMYQLTQ............ePVYGELLVKVLAG
CPCE_SYNP7/173-200 IRLAAARSLYQLTG............dDHYAERVVQGLSD
CPCE_SYNP2/172-199 IPYAALRALYQLTQ............eAHYAEQLMEALNG
Q9S334_PROMA/165-192 VKGAAIAAISRLTG............eSNNLDILRSNLDL
Q9RJS9_STRCO/161-186 VAGALRWALARSGD.............-DAAALLARGLDS
Q44295_9NOST/248-274 VCCAAANALARMGG.............DDAAQHLYKALIS
Q9S332_PROMA/122-147 VQGSSAGAIAIFGE.............-HAIEYFVRVLER
MPEU_SYNPY/122-147 VQGSSAGAMATIGE.............-PAIEPLLRILTE
MPEV_SYNPY/125-150 VQGSAMGAMAAIGE.............-EAVTPILNLLSH
YCPY_PSEA9/68-94 VRRKAVETLGRLRA.............TVALPVIRECLSD
P71324_FREDI/68-94 VRRKSVETLGRLKA.............TTALPFIRICLFD
Q9S334_PROMA/69-95 AKRKAIEVLGRLGC.............KKAITIIGNNLKS
CPCE_SYNY3/141-167 PYEAIIEALGTLQA.............VESIGLIEPFLEH
CPCE_SYNP2/141-167 PYEAVIEALGTIGA.............TAAIAEIEPFLDH
CPCE_ANASP/147-173 PYEAVLEALGAIGA.............TDAIPLIQPFLEH
CPCE_SYNEL/151-177 PVEAVIESLGHLGA.............TEAIALIEPFLAH
CPCE_PSEA9/140-166 PYDAFLEALGTLGA.............VKAIPHILPFLDH
CPCE_FREDI/161-187 PFDAIIEALGTLGA.............SDAIPIIQEFLEH
CPCE_SYNP7/142-168 PADAVMETLGQLRA.............TVAVPVVQAFLEH
RPCE_SYNPY/211-237 IRRGALLDLGATGW.............MPALPAIKAATVE
CPCE_SYNY3/204-230 LRRSAMMDLGATGY.............LPGAQAIAKAFAE
CPCE_SYNP2/204-230 LRRSALLDLGAIGY.............VPAGQAIAKAYAE
CPCE_PSEA9/206-232 LRRTVLSDLGAIGY.............LSAAEAIGNTMAE
CPCE_ANASP/210-236 LRRVALGDLGAIGY.............LAAAEAIANAKAE
CPCE_SYNEL/214-241 LRRTALLDLGAMGY............lPAAEAILQAGVEA
PECE_MASLA/191-217 LRWAAIFDLAALGH.............RQAVDAILAAKVP
PECE_ANASP/187-213 LRWAAVFDLGAVAH.............QQAVQAILTAQVP
P74527_SYNY3/706-733 VRCGAIAGLSQLTT............sAQAVDAILAYTAN
P74284_SYNY3/156-182 VQQAAIAALGEIGA.............VDAVDAILAFASH
Q9ZNK2_CLOHI/173-199 VLQYAIKSLQKINS.............TRGIEKIKKIYEN
Q9S332_PROMA/251-277 VRKQTALSLMRLKA.............SNQIERLRNSLLN
MPEV_SYNPY/254-280 VRKNSVLSLMKLNA.............KEALPKLEELELQ
MPEU_SYNPY/251-277 VRKNAALSLMKMEA.............VISIDFLDRAIRQ
YJ40_YEAST/204-230 QRYRAMFRLRDIGT.............DEAILALATGFSA
Q9V9U4_DROME/175-201 DRYRAMFSLRNLRT.............EESVLAIAEGLKD
O75265_HUMAN/69-95 ERYRAMFALRNAGG.............EEAALALAEGLHC
Q17949_CAEEL/178-204 DRYRAMFSLRNIKT.............DKSIKALAQGLYC
Q9V9U4_DROME/23-49 ERFRALFTLKNIGG.............GAAIEAISKAFDD
Q17949_CAEEL/28-54 ARFRALFILRNIGC.............DRSVDWIGKCLND
O15781_BABBO/159-185 KRYEALFQIRNSGG.............DEAAVMIGNALIS
Q9Z3G5_SYNP7/17-43 DRLKALNAIRNLPL.............ADAFELICKAIAD
P72807_SYNY3/19-45 DKVRGLNQLRALEP.............AEAFPLLKPLVND
P74284_SYNY3/30-56 DRLIALASLRPYSS.............EEAVPLIKKVLDD
O15768_BABBI/38-64 LQLRALYFCRDLKS.............SECATLLKKALDV
YCPZ_PSEA9/149-175 LAVSLVNAIASTGD.............SRGIDVLQAIIND
P71325_FREDI/150-176 LGISIVNALGSIGD.............SRGVEVLQSLIEN
Q9Z3G5_SYNP7/115-141 LQFSIVATLGELGD.............RRAFDLLAAAIES
P72807_SYNY3/117-143 LQMSIVATLGEMGD.............RRGFDLLKIALDS
YCPY_PSEA9/386-411 LKYASLLALEKFGD.............-RSGYELLANDDD
Q9S334_PROMA/321-353 ALYFLMIILRKINDsgd.......knnKISIELLNHCLDD
YCPZ_PSEA9/17-43 VRNQGMWGIADNYD.............AEVINRLMALLDE
P71325_FREDI/18-44 LRDQAMWELAENPD.............ETTIPRLMSILDE
Q9S334_PROMA/33-59 DYYKAVFHLAKYPS.............RETEEALMDLLIS
YCPY_PSEA9/99-127 MIENAVWAIGEIGTe...........dPEILQEIMLLLDR
P71324_FREDI/99-127 TVENAAWAIGEIGTq...........dTDILEDVAQLLEK
Q9S334_PROMA/100-124 LVENAAWALQELSC.............--ADAELHNLIGC
Q9ZNK2_CLOHI/111-137 KKERAIWIIGEAKA.............ENAISILLKASVH
Q44295_9NOST/123-148 IKAIASSAIAQMGT.............-IAIPVIVELLAQ
P74527_SYNY3/777-802 TQVSVTSALGQMET.............-PKAIDISQNLAN