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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF03129 - HGTP_anticodon) |
| Anticodon binding domain |
| (Pfam reference: accession no. PF03129) |
| (Interpro reference: accession no. IPR004154) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
117 sequences @ 141 aa (ave. pairwise identity: 0.22) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 80.45) |
| nucleotides (available for above) |
110 sequences @ 423 bp (ave. pairwise identity: 0.38) |
New Hampshire format (total tree length: 55.89) |
|
amino acids, restricted set (corresp. to available nt seqs) |
110 sequences @ 141 aa (ave. pairwise identity: 0.22) |
New Hampshire format (total tree length: 76.65) |