EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03120 alignment
(24 sequences with 264 bp)


DNLJ_TREPA/302-381 GCGATAACCACCTTGCGTGACGTTCAATGGCAAACA------TCAGGAGTGacgTACACGCCCATTGGTATTACCGATCCAGTGCGCCTTGCAGGAACTACGGTCAAGCGCGCAAATTTATGTAACCCGAATATGCTCACAAAGCTGTGTCTCAAAATTGGCAGCCACGTTTTAATTTCCAAACGGGGGGAGATTATCCCAAAAATTGAAGCACTCGTTTCA---......---ACC------CCAGCACATGCGCAGGAAATC
DNLJ_BORBU/314-393 ---------AGGGTAAATAGCATTGTTGTTCAGGTTGGACGTAGTGGTAAA...ATTACTCCGGTTGCTAATATTGATAAAGTTTTTGTTTCAGGAGCTTTTATTACTAGTGCAACGTTACACAATCAAGATTATATAAGGTCTATTGGGTTGAATGTTGGTGATGTTGTTAAAGTTTCAAGAAGAGGAGATGTAATTCCTGCTGTTGAAATGGTGATAAAT---......---AAATTTTCAACAGGATTTTTCAAAGTTCCT
DNLJ_HELPJ/312-394 AAACACACCAAAATTGTAGGAGTCATTAACCAAGTGGGGCGCAGTGGGGCG...ATCACCCCGGTCGCTCTCTTAGAGCCTGTGGAAATTGCTGGAGCTATGGTTAATAGAGCGACCTTACACAATTATTCTGAAATTGAAAAAAAGAATATCATGCTCAATGATAGGGTGGTCGTCATTAGAAGCGGCGATGTGATCCCTAAAATCATCAAACCTTTAGAA---......---TCTTATAGAGACGGCTCGCAACAAAAAATC
DNLJ_HAEIN/330-412 GAATTAACCCTGTTGAATGATGTTGAATTCCAAGTGGGTCGAACTGGCGCA...ATCACACCAGTTGCCAAATTAGAGCCAGTGTTTGTTGCAGGCGTTACAGTAAGTAATGCCACCTTACATAATGGCGATGAAATTGAACGTTTAAATATCGCTATTGGCGATACTGTTGTTATTCGTCGAGCAGGCGATGTAATTCCACAAATTATTGGCGTATTACAC---......---GAACGTCGCCCTGATAATGCTAAACCAATC
Q9RBF2_ALTHA/320-402 GAAATAACCCAATTACTTGATGTTGATTTTCAAGTCGGTCGTACTGGCGCC...ATTACACCGGTTGCACGTTTGAAGCCTGTTTTTGTGGGGGGCGTTACCGTATCAAATGCAACGCTTCATAACAGTGATGAAGTTGCACGTTTGGGCGTCAAAGTAGGTGATACAGTTATTATTCGCCGCGCTGGGGACGTGATCCCGCAAATAACACAAGTTGTACTT---......---GAGCGTCGCCCTGATGATGCCAGAGACATT
DNLJ_ECOLI/320-402 CAGATGACCTTTGTGCGTGACGTCGAGTTTCAGGTTGGGCGTACTGGCGCG...ATTACGCCTGTTGCGCGTCTGGAACCTGTCCATGTTGCAGGCGTGCTGGTGAGTAACGCAACCTTACACAATGCGGATGAAATCGAACGTCTTGGTTTACGCATTGGCGATAAAGTGGTGATTCGCCGCGCTGGCGACGTGATCCCGCAGGTGGTTAACGTCGTGCTT---......---TCTGAACGCCCGGAAGATACCCGTGAGGTT
DNLJ_ZYMMO/348-430 GCACAAACGACGCTTTTAGATATCGAGATACAGGTTGGGCGTACGGGCGTT...TTGACACCTGTGGCTAAACTAGAGCCTGTCACGGTTGGAGGGGTCGTTGTCTCTTCTGCGACCCTCCATAACTCTGATGAAATTGAGCGTTTGGGTGTCCGTCCGGGAGATCGGGTTCTGGTTCAACGTGCTGGAGATGTTATTCCCCAGATAGTCGAAAATTTAACC---......---CCTGATGTCGATCGTCCGATTTGGCATTTC
DNLJ_RICPR/326-407 ---CAAACAAAGTTACTATCTATTACGGTGCAAGTTGGTAGAACAGGTATG...TTAACGCCTGTAGCAGAGCTTGATCCTATAGAAATAGGTGGGGTAGTTGTTAGTAGAGCAACACTACATAATTTCCAAGATATTGCACGAAAAGATGTGCGGATTAAGGATTATGTATTTTTGCAACGTGCTGGTGATGTTATTCCTCAAATCACAGGTGTTGATATA---......---AGCAAACGTTCCAATGATACGGTAAAGTTT
DNLJ_CHLTR/315-397 GCAGAAACGATTTTGGAGGATATTGTCGTTCAAGTAGGGAAAACGGGTATT...CTTACTCCGGTTGCCGAGTTAGCTCCTGTTTTTTTATCTGGGAGCCGCGTGTCCAGAGCATCCTTATACAACCAAGATGAGATTGAAAAAAAAGATATTCGCATCGGAGATTCGGTGTATGTCGAAAAAGGAGGAGAGGTTATTCCCAAAATTGTTGGGATTAATTTG---......---GCTAAGCGTTCATTAGAGAGCGAGCCTTGG
DNLJ_CHLPN/316-398 GCAGAGACCCTTCTTGAGGATATTCTAGTTCAAGTAGGAAGAACGGGAGTT...CTGACTCCTGTAGCTAAACTCACTCCTGTACTGTTGTCAGGGTCTTTAGTATCTAGAGCGTCTCTATACAATGAAGATGAGATTCATAGAAAAGACATCCGTATTGGTGATACCGTTTGTGTTGCTAAAGGTGGAGAGGTGATTCCAAAAGTAGTTCGGGTATGCAGA---......---GAAAAACGTCCTGAAGGTTCTGAAGTTTGG
DNLJ_THEMA/321-403 GCAAGAACTAGGGTGCTGGATGTCACCATCCAGGTTGGAAGAACAGGTGTT...CTCACACCCGTTGCCGAGCTCGAACCCGTTCAGCTCGCTGGAACGATCGTGAAGAGAGCTTCACTGCACAATTTCGAGTACATAAGAGAAAAAGATATCAGAATAGGAGACTACGTCTTTGTGGAAAAAGCCGGTGGAATCATTCCTCAGATAGTCAAATCGATACCA---......---GAATTGAGAACTGGCAACGAAAAGGAAATA
DNLJ_RHOMR/362-444 GCCATCACGCGCCTGCTGGACATCATGGTCAGCGTGGGGCGCACCGGCGTG...GTCAAACCGGTGGCCGTGTTGGAGCCGGTCGAAGTCGGCGGTGTGACGGTCTCGCAGGCCACGCTGCACAATGAAGACTACGTGCGCAGCCGCGACATCCGGATCGGCGATCTGGTGGTGGTGATCCGGGCCGGCGACGTGATTCCGCAGGTGGTGCGCCCCGTGGTC---......---GAAGCGCGTACGGGCAACGAGCGCCCCTGG
DNLJ_AQUAE/350-432 GCGGTAACAAAACTCGTTGACGTTGTCTTTCAGGTGGGAAGGACGGGAACG...ATTACACCTGTGGGTAAGCTCGAGCCTGTAGAGCTGGGAGGCGTTACCGTTTCTTCTGTATCTCTATTTAACGAAGACTTTATAAGGGAAAAGGACATCAGGATAGGTGACTGGGTGGTAGTTGAGAGGGCTGGAGACGTTATACCTTACGTGGTTGAAGTCTTAAAG---......---GAAAAGAGAACGGGTGAAGAGAAACCCGTG
Q9ZFY2_9DEIN/236-318 AAGGAGACCCGGCTTTTGGACGTGGTCTTCCAGGTGGGGCGCACGGGGCGG...GTGACCCCGGTGGGGATCCTGGAGCCCGTGTTGATAGAGGGGAGCGAGGTGTCCCGGGTCACCCTGCACAACGAAAGCTACATTGAAGAGCTGGACATCCGCATCGGGGACTGGGTCTTGGTCCACAAGGCGGGGGGGGTCATCCCCGAAGTCTTGAGGGTGCTAAAG---......---GAGCGGCGCACCGGGGCGGAGCGGCCCATC
DNLJ_STRCO/335-417 GTCAACACCAAGCTGGTCGACATCAAGGTGGGCGTCGGCCGCACCGGCCGC...GTCACGCCGTACGCGCAGGTCGAGCCGGTCACGGTGGCCGGCAGCGAGGTGGAGTTCGCCACCCTGCACAACCAGGAGGTCGTCAAGGCCAAGGGCGTGCTCATCGGCGACACCGTGGTGCTGCGCAAGGCCGGTGACGTGATCCCGGAGATCCTCGGGCCGGTCGCC---......---GACCTCAGGGACGGCAGCGAGCGGGAGTTC
DNLJ_MYCTU/330-412 GCGCAGACCAAGCTGCTCGACATCCGGGTGAACGTCGGCCGCACCGGGCGG...ATCACGCCGTTTGCGTTCATGACGCCGGTGAAGGTGGCCGGGTCGACGGTGGGACAGGCCACCCTGCACAACGCCTCGGAGATCAAGCGCAAGGGCGTGCTGATCGGCGACACCGTGGTGATCCGCAAGGCCGGCGACGTGATCCCCGAGGTGCTGGGACCCGTCGTC---......---GAACTGCGCGATGGCTCCGAACGCGAATTC
DNLJ_BACSU/316-398 GTCGTGACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGTG...ATTACGCCGACTGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGGTCTCAAGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATTCGGATTTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGAAGTTGTGAATGTCCTCGTT---......---GACCAGCGCACAGGAGAAGAAAAGGAATTC
DNLJ_BACST/315-397 GTGGTGACGACGTTAATCGGCATTGAGGTGAACGTCGGCCGCACGGGTGTC...GTCACGCCGACGGCGATTTTAGAGCCGGTGCGCGTCGCCGGCACGACGGTGCAGCGCGCCACCCTTCACAATGAAGATTTTATACGGGAAAAAGACATTCGCATCGGCGATGCGGTCATCATTAAAAAAGCGGGCGACATCATCCCGGAAGTGGTCGGCGTCGTCGTT---......---GACCGGCGCGATGGGGATGAAACGCCGTTT
DNLJ_SYNY3/319-401 ACCCCCACCGTAGTCAAAGCCATTGAAGTTAATGTGGGCCGCACCGGCGCA...GTCACCCCCCTAGCCGTGATGGAGCCAGTACAGTTAGCCGGCACCACGGTACAAAGAGCCACTCTGCATAACCAAGACCGCATCCAAGAATTAGATATCCGGGTGGGGGACACGGTAATTATTCGCAAAGCAGGGGAAATTATCCCCGAAGTGGTCCGGGTAATGACA---......---GAATTGCGCCCGGAAAACACCACCCCCTAC
Q99540_HUMAN/327-409 GCCTTAACGGTGGTTCGCGATATTGAATGGACCGTGGGTCGGACAGGTGCC...GTCACACCAACGGCTATCATGGATCCTGTTCAACTAGCTGGAACCACAGTGCAACGTGCGAGTTTGCACAATCCTGATTATTTGCAACAAAAAGATATTCGCATCGGGGATACGGTCACGTTGCATAAGGCTGGGGATATTATTCCGGAAGTTGGCCAAGTGATTTTA---......---TCTCAGCGACCAGCCGATAGTATCGCATAT
Q9RSQ5_DEIRA/330-412 GTCGAAACGGTGCTCGAAAGCATCACGGTGAACGTGGGCCGCACCGGCAAA...CTCGCGCCGCTCGCTCACCTGTCGCCCCGGCTGATCGAGGGCAGCACGGTCAGTAAGGCGACCCTGCACAACGAGGACTACATCCGCGATATGGACCTGCGGGTGGGCGACACCGTGCTGGTGCGCAAATCGGGCGGCGTGATTCCCCAGATTATGCGGGTGCTGCCC---......---GACAAGCGCCCGGCGGACGCCGCGCCATTT
DNLJ_MYCGE/310-392 GTTCAAACTAAATTAACAGCAGTTCTTATAACGATTGGTAGAACTGGTAGA...GTGAACTATACTGCTAAATTAGAAAGTGTTAATTTAGATGGAACAAAAGTAACAGCTGCTACTTTACATAACTTTGATTACATTAAAACTAAAGACATTAGGATCAATGACACTGTTGTTATCTATAAAGCTGGGGAAATTATCCCTAAAGTACTAAAGGTAAATCTT---......---GAAAAAAGAAAAAATGACACTATCATAATT
DNLJ_MYCPN/309-391 GTCCAAACCAAACTGCGTGGTGTCTTGGTAACAGTGGGACGCACTGGCAAG...ATTAACTATACCGCGCAGTTAGATCCAGTTAACTTAGAGGGGACAGTAGTATCAGCAGCCACACTGCATAACTTTGACTACATTAAGGAGAAGGACATTCGTTTAAACGATACAGTGATAATTTACAAAGCGGGGGAAATTATCCCTAAGGTATTGGAGGTGTGTTTA---......---CCGTTAAGAACAGCAGCGAATCAACCGATT
Q9YVT0_MSEPV/286-370 ------ACTAAAGTTTTAAATGTTATATGGCAAATTTCTAAACAAAATAAA...TATATTCCTATTGCTGAATTAGAACCTATAAAACTTGAAAATAAGACTATAAAAAGAGTTTCATGTTATAATGCAAAATTTGTAACAGAAAATGGTATTGGTACAGATGCAATAGTTGAAATAGAATATAGAGGTGGTGCTATTCCAAAATTAGTAAATGTAATTAAACCAgtaactGTAGATGAATCTGATTTACCAGATGGTAAAATT