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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF03118 - RNA_pol_A_CTD) |
| Bacterial RNA polymerase, alpha chain C terminal domain |
| (Pfam reference: accession no. PF03118) |
| (Interpro reference: accession no. IPR011260) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
14 sequences @ 68 aa (ave. pairwise identity: 0.37) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 8.08) |
| nucleotides (available for above) |
14 sequences @ 204 bp (ave. pairwise identity: 0.49) |
New Hampshire format (total tree length: 5.80) |
|
amino acids, restricted set (corresp. to available nt seqs) |
14 sequences @ 68 aa (ave. pairwise identity: 0.37) |
New Hampshire format (total tree length: 8.08) |