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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03109 phylogeny
for amino acid alignment


 
((((((((YP09_YEAST/152-286,Q9SY86_ARATH/74-200),(((Q9WXF7_9NOCA/128-243,UBIB_ECOLI/111-232),Y445_CHVP1/90-208),(Q9ZCP5_RICPR/34-153,(Q9X3X3_ZYMMO/110-229,Q9RHC1_BRAJA/100-221)))),(((Q9VTG5_DROME/162-278,Y290_ARATH/147-268),((O17735_CAEEL/142-259,(Q9W133_DROME/137-253,Q9UIE6_HUMAN/68-184)),(YL53_YEAST/166-289,O60111_SCHPO/205-323))),Q9SRZ5_ARATH/155-271)),(((Y889_SYNY3/100-218,O42653_SCHPO/167-287),O27682_METTH/119-238),(((O80962_ARATH/256-373,Y005_SYNY3/161-279),(Y1919_SYNY3/127-246,O49588_ARATH/210-345)),(Y095_SYNY3/115-238,(Y1770_SYNY3/142-261,Q9SFD6_ARATH/247-365))))),(Q9SZX1_ARATH/121-225,Y647_MYCTU/150-271)),Q49747_MYCLE/146-262),(O65576_ARATH/283-399,(YLC4_CAEEL/417-533,Q9VYI6_DROME/336-452))),ABCI_SCHPO/284-401,ABC1_YEAST/176-292);
((((((((YP09_YEAST/152-286:0.59498,Q9SY86_ARATH/74-200:0.54628):0.35432,(((Q9WXF7_9NOCA/128-243:1.23700,UBIB_ECOLI/111-232:0.33533):0.08431,Y445_CHVP1/90-208:1.22321):0.16393,(Q9ZCP5_RICPR/34-153:0.60067,(Q9X3X3_ZYMMO/110-229:0.65136,Q9RHC1_BRAJA/100-221:0.55763):0.22171):0.22572):0.16169):0.13288,(((Q9VTG5_DROME/162-278:0.56245,Y290_ARATH/147-268:0.64105):0.16662,((O17735_CAEEL/142-259:0.30122,(Q9W133_DROME/137-253:0.31055,Q9UIE6_HUMAN/68-184:0.42161):0.12412):0.09414,(YL53_YEAST/166-289:0.49891,O60111_SCHPO/205-323:0.35535):0.33392):0.13783):0.14576,Q9SRZ5_ARATH/155-271:0.40792):0.23687):0.06962,(((Y889_SYNY3/100-218:0.92221,O42653_SCHPO/167-287:0.64138):0.13835,O27682_METTH/119-238:0.44832):0.11255,(((O80962_ARATH/256-373:0.75149,Y005_SYNY3/161-279:0.37032):0.20128,(Y1919_SYNY3/127-246:0.35458,O49588_ARATH/210-345:0.48931):0.09025):0.24674,(Y095_SYNY3/115-238:0.47452,(Y1770_SYNY3/142-261:0.34815,Q9SFD6_ARATH/247-365:0.22069):0.32925):0.16802):0.12312):0.11167):0.09973,(Q9SZX1_ARATH/121-225:0.89276,Y647_MYCTU/150-271:0.60624):0.10996):0.21183,Q49747_MYCLE/146-262:0.72170):0.44745,(O65576_ARATH/283-399:0.37356,(YLC4_CAEEL/417-533:0.31927,Q9VYI6_DROME/336-452:0.31931):0.13885):0.10250):0.23085,ABCI_SCHPO/284-401:0.29059,ABC1_YEAST/176-292:0.23059);