EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF03064 - U79_P34)
HSV U79 / HCMV P34
(
Pfam
reference: accession no.
PF03064
)
(
Interpro
reference: accession no.
IPR004138
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 288 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.71)
nucleotides
(available for above)
5 sequences @ 864 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 2.52)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 288 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 3.71)